RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
PPFIA2-220ENST00000550584 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
PPFIA2-220ENST00000550584 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.71
PPFIA2-220ENST00000550584 SACSQ9NZJ4 4579 aa4.34□□□□□ -1.71
PPFIA2-220ENST00000550584 DNAH2Q9P225 4427 aa4.33□□□□□ -1.72
PPFIA2-220ENST00000550584 STAB2Q8WWQ8 2551 aa4.33□□□□□ -1.72
PPFIA2-220ENST00000550584 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
PPFIA2-220ENST00000550584 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
PPFIA2-220ENST00000550584 PKHD1P08F94 4074 aa4.32□□□□□ -1.72
PPFIA2-220ENST00000550584 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
PPFIA2-220ENST00000550584 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
PPFIA2-220ENST00000550584 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
PPFIA2-220ENST00000550584 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
PPFIA2-220ENST00000550584 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
PPFIA2-220ENST00000550584 HECTD4Q9Y4D8 3996 aa4.25□□□□□ -1.73
PPFIA2-220ENST00000550584 RYR2Q92736 4967 aa4.24□□□□□ -1.73
PPFIA2-220ENST00000550584 PKD1P98161 4303 aa4.18□□□□□ -1.74
PPFIA2-220ENST00000550584 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
PPFIA2-220ENST00000550584 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
PPFIA2-220ENST00000550584 PCLOQ9Y6V0 5065 aa4.1□□□□□ -1.75
PPFIA2-220ENST00000550584 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
PPFIA2-220ENST00000550584 RYR1P21817 5038 aa4.05□□□□□ -1.76
PPFIA2-220ENST00000550584 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
PPFIA2-220ENST00000550584 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
PPFIA2-220ENST00000550584 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
PPFIA2-220ENST00000550584 HSPG2P98160 4391 aa4.02□□□□□ -1.77
PPFIA2-220ENST00000550584 KRTAP21-3Q3LHN1 58 aa3.99□□□□□ -1.77
PPFIA2-220ENST00000550584 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
PPFIA2-220ENST00000550584 DNAH8Q96JB1 4490 aa3.98□□□□□ -1.77
PPFIA2-220ENST00000550584 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
PPFIA2-220ENST00000550584 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
PPFIA2-220ENST00000550584 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
PPFIA2-220ENST00000550584 FAT1Q14517 4588 aa3.96□□□□□ -1.78
PPFIA2-220ENST00000550584 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
PPFIA2-220ENST00000550584 HERC1Q15751 4861 aa3.94□□□□□ -1.78
PPFIA2-220ENST00000550584 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
PPFIA2-220ENST00000550584 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
PPFIA2-220ENST00000550584 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
PPFIA2-220ENST00000550584 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
PPFIA2-220ENST00000550584 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
PPFIA2-220ENST00000550584 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
PPFIA2-220ENST00000550584 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
PPFIA2-220ENST00000550584 SRRM2Q9UQ35 2752 aaKnown RBP3.86□□□□□ -1.79
PPFIA2-220ENST00000550584 HERC2O95714 4834 aa3.84□□□□□ -1.79
PPFIA2-220ENST00000550584 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
PPFIA2-220ENST00000550584 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
PPFIA2-220ENST00000550584 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
PPFIA2-220ENST00000550584 MUC2Q02817 5179 aa3.77□□□□□ -1.81
PPFIA2-220ENST00000550584 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
PPFIA2-220ENST00000550584 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
PPFIA2-220ENST00000550584 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
PPFIA2-220ENST00000550584 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
PPFIA2-220ENST00000550584 TNXBP22105 4242 aa3.69□□□□□ -1.82
PPFIA2-220ENST00000550584 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
PPFIA2-220ENST00000550584 LPAP08519 4548 aa3.67□□□□□ -1.82
PPFIA2-220ENST00000550584 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
PPFIA2-220ENST00000550584 LRP2P98164 4655 aa3.61□□□□□ -1.83
PPFIA2-220ENST00000550584 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
PPFIA2-220ENST00000550584 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
PPFIA2-220ENST00000550584 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
PPFIA2-220ENST00000550584 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
PPFIA2-220ENST00000550584 LORP23490 312 aaPredicted RBP3.47□□□□□ -1.85
PPFIA2-220ENST00000550584 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
PPFIA2-220ENST00000550584 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
PPFIA2-220ENST00000550584 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
PPFIA2-220ENST00000550584 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
PPFIA2-220ENST00000550584 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
PPFIA2-220ENST00000550584 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
PPFIA2-220ENST00000550584 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
PPFIA2-220ENST00000550584 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
PPFIA2-220ENST00000550584 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
PPFIA2-220ENST00000550584 USH2AO75445 5202 aa3.18□□□□□ -1.9
PPFIA2-220ENST00000550584 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
PPFIA2-220ENST00000550584 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
PPFIA2-220ENST00000550584 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
PPFIA2-220ENST00000550584 MT3P25713 68 aa3.13□□□□□ -1.91
PPFIA2-220ENST00000550584 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
PPFIA2-220ENST00000550584 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.92
PPFIA2-220ENST00000550584 MT2AP02795 61 aa3.02□□□□□ -1.93
PPFIA2-220ENST00000550584 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
PPFIA2-220ENST00000550584 KRTAP4-1Q9BYQ7 146 aa2.99□□□□□ -1.93
PPFIA2-220ENST00000550584 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
PPFIA2-220ENST00000550584 MT1HP80294 61 aa2.96□□□□□ -1.94
PPFIA2-220ENST00000550584 LCE2CQ5TA81 110 aa2.94□□□□□ -1.94
PPFIA2-220ENST00000550584 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
PPFIA2-220ENST00000550584 MT1XP80297 61 aa2.93□□□□□ -1.94
PPFIA2-220ENST00000550584 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
PPFIA2-220ENST00000550584 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
PPFIA2-220ENST00000550584 MT1FP04733 61 aa2.91□□□□□ -1.94
PPFIA2-220ENST00000550584 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
PPFIA2-220ENST00000550584 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
PPFIA2-220ENST00000550584 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
PPFIA2-220ENST00000550584 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
PPFIA2-220ENST00000550584 MT1LQ93083 61 aa2.85□□□□□ -1.95
PPFIA2-220ENST00000550584 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
PPFIA2-220ENST00000550584 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
PPFIA2-220ENST00000550584 PRM1P04553 51 aa2.82□□□□□ -1.96
PPFIA2-220ENST00000550584 MT1EP04732 61 aa2.82□□□□□ -1.96
PPFIA2-220ENST00000550584 LCE2BO14633 110 aa2.82□□□□□ -1.96
PPFIA2-220ENST00000550584 KMT2DO14686 5537 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms