RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KTN1-AS1Q86SY8 53 aa10.97□□□□□ -0.65
PRDM4-205ENST00000550376 BIRC6Q9NR09 4857 aa10.96□□□□□ -0.66
PRDM4-205ENST00000550376 CDC42SE1Q9NRR8 79 aa10.91□□□□□ -0.66
PRDM4-205ENST00000550376 A6NN06 94 aa10.9□□□□□ -0.66
PRDM4-205ENST00000550376 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
PRDM4-205ENST00000550376 J3QL48 77 aa10.85□□□□□ -0.67
PRDM4-205ENST00000550376 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
PRDM4-205ENST00000550376 TPRXLQ17RH7 258 aa10.81□□□□□ -0.68
PRDM4-205ENST00000550376 A0A1B0GU69 56 aa10.78□□□□□ -0.68
PRDM4-205ENST00000550376 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
PRDM4-205ENST00000550376 HERC1Q15751 4861 aa10.68□□□□□ -0.7
PRDM4-205ENST00000550376 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
PRDM4-205ENST00000550376 MUC2Q02817 5179 aa10.56□□□□□ -0.72
PRDM4-205ENST00000550376 PRAC1Q96KF2 57 aa10.54□□□□□ -0.72
PRDM4-205ENST00000550376 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
PRDM4-205ENST00000550376 S4R3F8 94 aa10.5□□□□□ -0.73
PRDM4-205ENST00000550376 KRTAP4-1Q9BYQ7 146 aa10.48□□□□□ -0.73
PRDM4-205ENST00000550376 MUC17Q685J3 4493 aa10.48□□□□□ -0.73
PRDM4-205ENST00000550376 UQCR11O14957 56 aa10.46□□□□□ -0.73
PRDM4-205ENST00000550376 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
PRDM4-205ENST00000550376 SEC61BP60468 96 aaKnown RBP10.43□□□□□ -0.74
PRDM4-205ENST00000550376 MIR22HGQ0VDD5 57 aa10.43□□□□□ -0.74
PRDM4-205ENST00000550376 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
PRDM4-205ENST00000550376 HMCN2Q8NDA2 5059 aa10.38□□□□□ -0.75
PRDM4-205ENST00000550376 A0A1B0GU33 70 aa10.35□□□□□ -0.75
PRDM4-205ENST00000550376 H0YAA0 97 aa10.32□□□□□ -0.76
PRDM4-205ENST00000550376 KRTAP10-6P60371 365 aaPredicted RBP10.29□□□□□ -0.76
PRDM4-205ENST00000550376 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
PRDM4-205ENST00000550376 P0C880 135 aa10.24□□□□□ -0.77
PRDM4-205ENST00000550376 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
PRDM4-205ENST00000550376 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
PRDM4-205ENST00000550376 KRTAP13-4Q3LI77 160 aa10.17□□□□□ -0.78
PRDM4-205ENST00000550376 KRTAP19-2Q3LHN2 52 aa10.12□□□□□ -0.79
PRDM4-205ENST00000550376 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
PRDM4-205ENST00000550376 UBR4Q5T4S7 5183 aa10.1□□□□□ -0.79
PRDM4-205ENST00000550376 A0A0D9SG42 100 aa10.08□□□□□ -0.8
PRDM4-205ENST00000550376 FAT4Q6V0I7 4981 aa10.05□□□□□ -0.8
PRDM4-205ENST00000550376 FLGP20930 4061 aaPredicted RBP9.94□□□□□ -0.82
PRDM4-205ENST00000550376 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
PRDM4-205ENST00000550376 H3BS24 57 aa9.87□□□□□ -0.83
PRDM4-205ENST00000550376 M0QZ58 72 aa9.78□□□□□ -0.84
PRDM4-205ENST00000550376 KRTAP12-2P59991 146 aa9.77□□□□□ -0.85
PRDM4-205ENST00000550376 LCE2CQ5TA81 110 aa9.77□□□□□ -0.85
PRDM4-205ENST00000550376 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
PRDM4-205ENST00000550376 K7ERS5 55 aa9.76□□□□□ -0.85
PRDM4-205ENST00000550376 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
PRDM4-205ENST00000550376 R4GN34 69 aa9.74□□□□□ -0.85
PRDM4-205ENST00000550376 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
PRDM4-205ENST00000550376 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
PRDM4-205ENST00000550376 ROMO1P60602 79 aa9.62□□□□□ -0.87
PRDM4-205ENST00000550376 M0R2T5 61 aa9.57□□□□□ -0.88
PRDM4-205ENST00000550376 MT1HP80294 61 aa9.54□□□□□ -0.88
PRDM4-205ENST00000550376 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
PRDM4-205ENST00000550376 MT1FP04733 61 aa9.25□□□□□ -0.93
PRDM4-205ENST00000550376 MT2AP02795 61 aa9.25□□□□□ -0.93
PRDM4-205ENST00000550376 KRTAP10-10P60014 251 aa9.24□□□□□ -0.93
PRDM4-205ENST00000550376 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
PRDM4-205ENST00000550376 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
PRDM4-205ENST00000550376 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
PRDM4-205ENST00000550376 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
PRDM4-205ENST00000550376 KRTAP15-1Q3LI76 137 aa9.01□□□□□ -0.97
PRDM4-205ENST00000550376 NDUFAF8A1L188 74 aa8.99□□□□□ -0.97
PRDM4-205ENST00000550376 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
PRDM4-205ENST00000550376 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
PRDM4-205ENST00000550376 LCE2AQ5TA79 106 aaPredicted RBP8.83□□□□□ -1
PRDM4-205ENST00000550376 USH2AO75445 5202 aa8.79□□□□□ -1
PRDM4-205ENST00000550376 MT1BP07438 61 aa8.79□□□□□ -1
PRDM4-205ENST00000550376 KRTAP19-8Q3LI54 63 aa8.79□□□□□ -1
PRDM4-205ENST00000550376 TNP1P09430 55 aa8.7□□□□□ -1.02
PRDM4-205ENST00000550376 LCE2BO14633 110 aa8.65□□□□□ -1.02
PRDM4-205ENST00000550376 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
PRDM4-205ENST00000550376 MT1XP80297 61 aa8.6□□□□□ -1.03
PRDM4-205ENST00000550376 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
PRDM4-205ENST00000550376 FSIP2Q5CZC0 6907 aa8.42□□□□□ -1.06
PRDM4-205ENST00000550376 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
PRDM4-205ENST00000550376 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
PRDM4-205ENST00000550376 KMT2DO14686 5537 aa8.32□□□□□ -1.08
PRDM4-205ENST00000550376 KRTAP23-1A1A580 65 aa8.3□□□□□ -1.08
PRDM4-205ENST00000550376 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.08
PRDM4-205ENST00000550376 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
PRDM4-205ENST00000550376 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
PRDM4-205ENST00000550376 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
PRDM4-205ENST00000550376 KRTAP8-1Q8IUC2 63 aa8.09□□□□□ -1.12
PRDM4-205ENST00000550376 KRTAP4-8A0A0G2JLE6 195 aa8.06□□□□□ -1.12
PRDM4-205ENST00000550376 KRTAP4-8Q9BYQ9 185 aa8.06□□□□□ -1.12
PRDM4-205ENST00000550376 A0A0A0MQY5 61 aa8.01□□□□□ -1.13
PRDM4-205ENST00000550376 KRTAP12-3P60328 96 aa8□□□□□ -1.13
PRDM4-205ENST00000550376 KRTAP19-5Q3LI72 72 aa7.91□□□□□ -1.14
PRDM4-205ENST00000550376 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
PRDM4-205ENST00000550376 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
PRDM4-205ENST00000550376 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
PRDM4-205ENST00000550376 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
PRDM4-205ENST00000550376 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
PRDM4-205ENST00000550376 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
PRDM4-205ENST00000550376 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
PRDM4-205ENST00000550376 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
PRDM4-205ENST00000550376 MT1EP04732 61 aa7.47□□□□□ -1.21
PRDM4-205ENST00000550376 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
PRDM4-205ENST00000550376 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
PRDM4-205ENST00000550376 MT1LQ93083 61 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms