RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
SMARCC2-208ENST00000550150 TNXBP22105 4242 aa5.93□□□□□ -1.46
SMARCC2-208ENST00000550150 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
SMARCC2-208ENST00000550150 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
SMARCC2-208ENST00000550150 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
SMARCC2-208ENST00000550150 H0YAA0 97 aa5.88□□□□□ -1.47
SMARCC2-208ENST00000550150 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
SMARCC2-208ENST00000550150 A0A1B0GU33 70 aa5.87□□□□□ -1.47
SMARCC2-208ENST00000550150 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
SMARCC2-208ENST00000550150 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
SMARCC2-208ENST00000550150 A8MUU9 505 aa5.79□□□□□ -1.48
SMARCC2-208ENST00000550150 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
SMARCC2-208ENST00000550150 A0A0D9SG42 100 aa5.79□□□□□ -1.48
SMARCC2-208ENST00000550150 K7ERS5 55 aa5.78□□□□□ -1.48
SMARCC2-208ENST00000550150 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
SMARCC2-208ENST00000550150 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
SMARCC2-208ENST00000550150 BIRC6Q9NR09 4857 aa5.76□□□□□ -1.49
SMARCC2-208ENST00000550150 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
SMARCC2-208ENST00000550150 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
SMARCC2-208ENST00000550150 HERC2O95714 4834 aa5.73□□□□□ -1.49
SMARCC2-208ENST00000550150 Q5VSD8 79 aa5.73□□□□□ -1.49
SMARCC2-208ENST00000550150 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
SMARCC2-208ENST00000550150 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
SMARCC2-208ENST00000550150 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
SMARCC2-208ENST00000550150 ROMO1P60602 79 aa5.67□□□□□ -1.5
SMARCC2-208ENST00000550150 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
SMARCC2-208ENST00000550150 LPAP08519 4548 aa5.65□□□□□ -1.5
SMARCC2-208ENST00000550150 SPINT4Q6UDR6 99 aa5.63□□□□□ -1.51
SMARCC2-208ENST00000550150 HERC1Q15751 4861 aa5.6□□□□□ -1.51
SMARCC2-208ENST00000550150 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
SMARCC2-208ENST00000550150 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
SMARCC2-208ENST00000550150 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
SMARCC2-208ENST00000550150 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
SMARCC2-208ENST00000550150 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
SMARCC2-208ENST00000550150 LRP2P98164 4655 aa5.56□□□□□ -1.52
SMARCC2-208ENST00000550150 P0C880 135 aa5.52□□□□□ -1.53
SMARCC2-208ENST00000550150 S4R3F8 94 aa5.52□□□□□ -1.53
SMARCC2-208ENST00000550150 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
SMARCC2-208ENST00000550150 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
SMARCC2-208ENST00000550150 TPRXLQ17RH7 258 aa5.5□□□□□ -1.53
SMARCC2-208ENST00000550150 MUC2Q02817 5179 aa5.44□□□□□ -1.54
SMARCC2-208ENST00000550150 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
SMARCC2-208ENST00000550150 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
SMARCC2-208ENST00000550150 XP32Q5T750 250 aa5.41□□□□□ -1.54
SMARCC2-208ENST00000550150 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.55
SMARCC2-208ENST00000550150 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
SMARCC2-208ENST00000550150 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
SMARCC2-208ENST00000550150 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
SMARCC2-208ENST00000550150 M0QZ58 72 aa5.27□□□□□ -1.57
SMARCC2-208ENST00000550150 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
SMARCC2-208ENST00000550150 R4GN34 69 aa5.23□□□□□ -1.57
SMARCC2-208ENST00000550150 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
SMARCC2-208ENST00000550150 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
SMARCC2-208ENST00000550150 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
SMARCC2-208ENST00000550150 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SMARCC2-208ENST00000550150 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
SMARCC2-208ENST00000550150 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
SMARCC2-208ENST00000550150 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
SMARCC2-208ENST00000550150 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
SMARCC2-208ENST00000550150 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
SMARCC2-208ENST00000550150 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
SMARCC2-208ENST00000550150 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
SMARCC2-208ENST00000550150 TNP1P09430 55 aa4.74□□□□□ -1.65
SMARCC2-208ENST00000550150 MT1HP80294 61 aa4.7□□□□□ -1.66
SMARCC2-208ENST00000550150 M0R2T5 61 aa4.64□□□□□ -1.67
SMARCC2-208ENST00000550150 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
SMARCC2-208ENST00000550150 USH2AO75445 5202 aa4.55□□□□□ -1.68
SMARCC2-208ENST00000550150 MT1FP04733 61 aa4.53□□□□□ -1.68
SMARCC2-208ENST00000550150 MT2AP02795 61 aa4.51□□□□□ -1.69
SMARCC2-208ENST00000550150 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
SMARCC2-208ENST00000550150 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
SMARCC2-208ENST00000550150 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
SMARCC2-208ENST00000550150 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
SMARCC2-208ENST00000550150 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
SMARCC2-208ENST00000550150 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
SMARCC2-208ENST00000550150 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
SMARCC2-208ENST00000550150 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
SMARCC2-208ENST00000550150 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
SMARCC2-208ENST00000550150 MT1BP07438 61 aa4.27□□□□□ -1.73
SMARCC2-208ENST00000550150 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SMARCC2-208ENST00000550150 KMT2DO14686 5537 aa4.22□□□□□ -1.73
SMARCC2-208ENST00000550150 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
SMARCC2-208ENST00000550150 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
SMARCC2-208ENST00000550150 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
SMARCC2-208ENST00000550150 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
SMARCC2-208ENST00000550150 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
SMARCC2-208ENST00000550150 MT1XP80297 61 aa4.16□□□□□ -1.74
SMARCC2-208ENST00000550150 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
SMARCC2-208ENST00000550150 INE1O15225 51 aa4.08□□□□□ -1.76
SMARCC2-208ENST00000550150 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
SMARCC2-208ENST00000550150 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
SMARCC2-208ENST00000550150 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
SMARCC2-208ENST00000550150 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
SMARCC2-208ENST00000550150 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
SMARCC2-208ENST00000550150 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
SMARCC2-208ENST00000550150 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SMARCC2-208ENST00000550150 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
SMARCC2-208ENST00000550150 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
SMARCC2-208ENST00000550150 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SMARCC2-208ENST00000550150 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms