RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
SMPDL3B-206ENST00000549094 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SMPDL3B-206ENST00000549094 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.23
SMPDL3B-206ENST00000549094 A8MUU9 505 aa7.32□□□□□ -1.24
SMPDL3B-206ENST00000549094 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
SMPDL3B-206ENST00000549094 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
SMPDL3B-206ENST00000549094 HERC1Q15751 4861 aa7.32□□□□□ -1.24
SMPDL3B-206ENST00000549094 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
SMPDL3B-206ENST00000549094 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.25
SMPDL3B-206ENST00000549094 A0A1B0GU33 70 aa7.27□□□□□ -1.25
SMPDL3B-206ENST00000549094 H0YAA0 97 aa7.27□□□□□ -1.25
SMPDL3B-206ENST00000549094 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
SMPDL3B-206ENST00000549094 J3QL48 77 aa7.23□□□□□ -1.25
SMPDL3B-206ENST00000549094 K7ERS5 55 aa7.21□□□□□ -1.26
SMPDL3B-206ENST00000549094 C9orf92A6NGG3 77 aa7.19□□□□□ -1.26
SMPDL3B-206ENST00000549094 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
SMPDL3B-206ENST00000549094 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
SMPDL3B-206ENST00000549094 KRTAP10-8P60410 259 aa7.16□□□□□ -1.26
SMPDL3B-206ENST00000549094 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
SMPDL3B-206ENST00000549094 TNXBP22105 4242 aa7.15□□□□□ -1.27
SMPDL3B-206ENST00000549094 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
SMPDL3B-206ENST00000549094 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
SMPDL3B-206ENST00000549094 HMCN2Q8NDA2 5059 aa7.06□□□□□ -1.28
SMPDL3B-206ENST00000549094 ROMO1P60602 79 aa6.99□□□□□ -1.29
SMPDL3B-206ENST00000549094 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
SMPDL3B-206ENST00000549094 H3BS24 57 aa6.97□□□□□ -1.29
SMPDL3B-206ENST00000549094 S4R3F8 94 aa6.91□□□□□ -1.3
SMPDL3B-206ENST00000549094 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.31
SMPDL3B-206ENST00000549094 LRP2P98164 4655 aa6.88□□□□□ -1.31
SMPDL3B-206ENST00000549094 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
SMPDL3B-206ENST00000549094 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
SMPDL3B-206ENST00000549094 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
SMPDL3B-206ENST00000549094 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
SMPDL3B-206ENST00000549094 A0A0D9SG42 100 aa6.81□□□□□ -1.32
SMPDL3B-206ENST00000549094 XP32Q5T750 250 aa6.79□□□□□ -1.32
SMPDL3B-206ENST00000549094 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
SMPDL3B-206ENST00000549094 LPAP08519 4548 aa6.75□□□□□ -1.33
SMPDL3B-206ENST00000549094 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
SMPDL3B-206ENST00000549094 P0C880 135 aa6.72□□□□□ -1.33
SMPDL3B-206ENST00000549094 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
SMPDL3B-206ENST00000549094 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
SMPDL3B-206ENST00000549094 M0QZ58 72 aa6.65□□□□□ -1.34
SMPDL3B-206ENST00000549094 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
SMPDL3B-206ENST00000549094 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
SMPDL3B-206ENST00000549094 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
SMPDL3B-206ENST00000549094 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
SMPDL3B-206ENST00000549094 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
SMPDL3B-206ENST00000549094 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
SMPDL3B-206ENST00000549094 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
SMPDL3B-206ENST00000549094 MUC17Q685J3 4493 aa6.52□□□□□ -1.37
SMPDL3B-206ENST00000549094 MUC2Q02817 5179 aa6.5□□□□□ -1.37
SMPDL3B-206ENST00000549094 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
SMPDL3B-206ENST00000549094 R4GN34 69 aa6.39□□□□□ -1.39
SMPDL3B-206ENST00000549094 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
SMPDL3B-206ENST00000549094 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
SMPDL3B-206ENST00000549094 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
SMPDL3B-206ENST00000549094 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
SMPDL3B-206ENST00000549094 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
SMPDL3B-206ENST00000549094 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
SMPDL3B-206ENST00000549094 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.43
SMPDL3B-206ENST00000549094 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
SMPDL3B-206ENST00000549094 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
SMPDL3B-206ENST00000549094 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
SMPDL3B-206ENST00000549094 MT1HP80294 61 aa6.03□□□□□ -1.44
SMPDL3B-206ENST00000549094 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
SMPDL3B-206ENST00000549094 M0R2T5 61 aa5.98□□□□□ -1.45
SMPDL3B-206ENST00000549094 TNP1P09430 55 aa5.93□□□□□ -1.46
SMPDL3B-206ENST00000549094 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
SMPDL3B-206ENST00000549094 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
SMPDL3B-206ENST00000549094 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
SMPDL3B-206ENST00000549094 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.48
SMPDL3B-206ENST00000549094 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
SMPDL3B-206ENST00000549094 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
SMPDL3B-206ENST00000549094 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
SMPDL3B-206ENST00000549094 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
SMPDL3B-206ENST00000549094 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
SMPDL3B-206ENST00000549094 MT2AP02795 61 aa5.71□□□□□ -1.5
SMPDL3B-206ENST00000549094 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
SMPDL3B-206ENST00000549094 MT1FP04733 61 aa5.67□□□□□ -1.5
SMPDL3B-206ENST00000549094 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
SMPDL3B-206ENST00000549094 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
SMPDL3B-206ENST00000549094 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.52
SMPDL3B-206ENST00000549094 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.52
SMPDL3B-206ENST00000549094 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
SMPDL3B-206ENST00000549094 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
SMPDL3B-206ENST00000549094 USH2AO75445 5202 aa5.54□□□□□ -1.52
SMPDL3B-206ENST00000549094 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
SMPDL3B-206ENST00000549094 SSPOA2VEC9 5147 aa5.49□□□□□ -1.53
SMPDL3B-206ENST00000549094 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
SMPDL3B-206ENST00000549094 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
SMPDL3B-206ENST00000549094 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SMPDL3B-206ENST00000549094 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
SMPDL3B-206ENST00000549094 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
SMPDL3B-206ENST00000549094 INE1O15225 51 aa5.33□□□□□ -1.56
SMPDL3B-206ENST00000549094 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
SMPDL3B-206ENST00000549094 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
SMPDL3B-206ENST00000549094 MT1BP07438 61 aa5.31□□□□□ -1.56
SMPDL3B-206ENST00000549094 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
SMPDL3B-206ENST00000549094 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
SMPDL3B-206ENST00000549094 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms