RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 NBEAQ8NFP9 2946 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
CNOT2-215ENST00000548863 LPAP08519 4548 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 SMR3BP02814 79 aaPredicted RBP0.2□□□□□ -2.38
CNOT2-215ENST00000548863 SPRR2EP22531 72 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 SPRR2FQ96RM1 72 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 RHPN1-AS1Q9BWJ2 59 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 CRYBG3Q68DQ2 2970 aa0.2□□□□□ -2.38
CNOT2-215ENST00000548863 COL12A1Q99715 3063 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 TGP01266 2768 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 SACSQ9NZJ4 4579 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 ITPR3Q14573 2671 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 KRTAP19-5Q3LI72 72 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 PKD1P98161 4303 aa0.19□□□□□ -2.38
CNOT2-215ENST00000548863 RANBP2P49792 3224 aaKnown RBP0.19□□□□□ -2.38
CNOT2-215ENST00000548863 DNAH11Q96DT5 4516 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 A0A096LNI7 61 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 RPL39P5Q59GN2 51 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 RYR2Q92736 4967 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 FAT3Q8TDW7 4589 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 HSPG2P98160 4391 aa0.18□□□□□ -2.38
CNOT2-215ENST00000548863 ANK3Q12955 4377 aaKnown RBP0.17□□□□□ -2.38
CNOT2-215ENST00000548863 H3BUX3 64 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 DEFB1P60022 68 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 RYR3Q15413 4870 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 HECTD4Q9Y4D8 3996 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 CELSR3Q9NYQ7 3312 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 CEP250Q9BV73 2442 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 ZFHX4Q86UP3 3567 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 HERC1Q15751 4861 aa0.17□□□□□ -2.38
CNOT2-215ENST00000548863 EPPK1P58107 5090 aaKnown RBP0.17□□□□□ -2.38
CNOT2-215ENST00000548863 RYR1P21817 5038 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 KALRNO60229 2985 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
CNOT2-215ENST00000548863 MXRA5Q9NR99 2828 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 LAMA1P25391 3075 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 DEFB108AA8MXU0 73 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
CNOT2-215ENST00000548863 SPTAN1Q13813 2472 aaKnown RBP0.15□□□□□ -2.38
CNOT2-215ENST00000548863 FRYQ5TBA9 3013 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 PKHD1P08F94 4074 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 LAMA5O15230 3695 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.39
CNOT2-215ENST00000548863 VPS13DQ5THJ4 4388 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 PKHD1L1Q86WI1 4243 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 ITPR1Q14643 2758 aa0.15□□□□□ -2.39
CNOT2-215ENST00000548863 DYNC2H1Q8NCM8 4307 aaKnown RBP0.14□□□□□ -2.39
CNOT2-215ENST00000548863 SPENQ96T58 3664 aaKnown RBP0.14□□□□□ -2.39
CNOT2-215ENST00000548863 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
CNOT2-215ENST00000548863 DEFB136Q30KP8 78 aa0.14□□□□□ -2.39
CNOT2-215ENST00000548863 KRTAP20-1Q3LI63 56 aa0.14□□□□□ -2.39
CNOT2-215ENST00000548863 DNAH2Q9P225 4427 aa0.14□□□□□ -2.39
CNOT2-215ENST00000548863 ABCA13Q86UQ4 5058 aa0.14□□□□□ -2.39
CNOT2-215ENST00000548863 DOPEY1Q5JWR5 2465 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 WDFY4Q6ZS81 3184 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 CSMD1Q96PZ7 3565 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 RNF213Q63HN8 5207 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 HTN1P15515 57 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 DEFB124Q8NES8 71 aa0.13□□□□□ -2.39
CNOT2-215ENST00000548863 TRIOO75962 3097 aa0.12□□□□□ -2.39
CNOT2-215ENST00000548863 HTTP42858 3142 aa0.12□□□□□ -2.39
CNOT2-215ENST00000548863 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
CNOT2-215ENST00000548863 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
CNOT2-215ENST00000548863 HERC2O95714 4834 aa0.12□□□□□ -2.39
CNOT2-215ENST00000548863 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
CNOT2-215ENST00000548863 USH2AO75445 5202 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 DNHD1Q96M86 4753 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 NBPF19A0A087WUL8 3843 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 APELAP0DMC3 54 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 DEFB133Q30KQ1 61 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 AKAP9Q99996 3911 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 TEX15Q9BXT5 2789 aa0.11□□□□□ -2.39
CNOT2-215ENST00000548863 BIRC6Q9NR09 4857 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 SPTBN5Q9NRC6 3674 aaKnown RBP0.1□□□□□ -2.39
CNOT2-215ENST00000548863 MT1HP80294 61 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 RELNP78509 3460 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 LRP2P98164 4655 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 DNAH8Q96JB1 4490 aa0.1□□□□□ -2.39
CNOT2-215ENST00000548863 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
CNOT2-215ENST00000548863 MGAQ8IWI9 3026 aa0.09□□□□□ -2.39
CNOT2-215ENST00000548863 LAMA3Q16787 3333 aa0.09□□□□□ -2.39
CNOT2-215ENST00000548863 ADGRG4Q8IZF6 3080 aa0.09□□□□□ -2.39
CNOT2-215ENST00000548863 SRCAPQ6ZRS2 3230 aa0.09□□□□□ -2.39
CNOT2-215ENST00000548863 MT1EP04732 61 aa0.09□□□□□ -2.4
CNOT2-215ENST00000548863 DNAH1Q9P2D7 4330 aa0.09□□□□□ -2.4
CNOT2-215ENST00000548863 C5orf42Q9H799 3197 aa0.08□□□□□ -2.4
CNOT2-215ENST00000548863 DMXL2Q8TDJ6 3036 aa0.08□□□□□ -2.4
CNOT2-215ENST00000548863 NIPBLQ6KC79 2804 aaeCLIP0.08□□□□□ -2.4
CNOT2-215ENST00000548863 PCNTO95613 3336 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms