RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
PRPF40B-206ENST00000547764 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
PRPF40B-206ENST00000547764 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
PRPF40B-206ENST00000547764 H3BPC8 53 aa8.57□□□□□ -1.04
PRPF40B-206ENST00000547764 A8MUN3 132 aa8.56□□□□□ -1.04
PRPF40B-206ENST00000547764 FCGBPQ9Y6R7 5405 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-206ENST00000547764 NDUFC1O43677 76 aa8.51□□□□□ -1.05
PRPF40B-206ENST00000547764 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
PRPF40B-206ENST00000547764 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-206ENST00000547764 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
PRPF40B-206ENST00000547764 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
PRPF40B-206ENST00000547764 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
PRPF40B-206ENST00000547764 H0YAA0 97 aa8.39□□□□□ -1.07
PRPF40B-206ENST00000547764 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
PRPF40B-206ENST00000547764 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
PRPF40B-206ENST00000547764 MT1BP07438 61 aa8.35□□□□□ -1.07
PRPF40B-206ENST00000547764 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
PRPF40B-206ENST00000547764 Q5VV11 94 aa8.34□□□□□ -1.07
PRPF40B-206ENST00000547764 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
PRPF40B-206ENST00000547764 MACF1Q9UPN3 7388 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-206ENST00000547764 KRTAP9-7A8MTY7 169 aa8.27□□□□□ -1.09
PRPF40B-206ENST00000547764 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
PRPF40B-206ENST00000547764 ACYP2P14621 99 aa8.23□□□□□ -1.09
PRPF40B-206ENST00000547764 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
PRPF40B-206ENST00000547764 A6NN06 94 aa8.17□□□□□ -1.1
PRPF40B-206ENST00000547764 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
PRPF40B-206ENST00000547764 P0C880 135 aa8.16□□□□□ -1.1
PRPF40B-206ENST00000547764 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-206ENST00000547764 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
PRPF40B-206ENST00000547764 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
PRPF40B-206ENST00000547764 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
PRPF40B-206ENST00000547764 R4GN34 69 aa8.08□□□□□ -1.12
PRPF40B-206ENST00000547764 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
PRPF40B-206ENST00000547764 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
PRPF40B-206ENST00000547764 M0QZ58 72 aa8.03□□□□□ -1.12
PRPF40B-206ENST00000547764 COX7CP15954 63 aa7.99□□□□□ -1.13
PRPF40B-206ENST00000547764 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
PRPF40B-206ENST00000547764 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
PRPF40B-206ENST00000547764 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
PRPF40B-206ENST00000547764 MT1XP80297 61 aa7.87□□□□□ -1.15
PRPF40B-206ENST00000547764 CYSTM1Q9H1C7 97 aa7.87□□□□□ -1.15
PRPF40B-206ENST00000547764 COA5Q86WW8 74 aa7.86□□□□□ -1.15
PRPF40B-206ENST00000547764 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
PRPF40B-206ENST00000547764 H7BZZ5 65 aa7.84□□□□□ -1.15
PRPF40B-206ENST00000547764 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
PRPF40B-206ENST00000547764 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
PRPF40B-206ENST00000547764 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
PRPF40B-206ENST00000547764 KRTAP5-9P26371 169 aa7.66□□□□□ -1.18
PRPF40B-206ENST00000547764 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
PRPF40B-206ENST00000547764 SEC61GP60059 68 aa7.65□□□□□ -1.18
PRPF40B-206ENST00000547764 KMT2DO14686 5537 aa7.65□□□□□ -1.19
PRPF40B-206ENST00000547764 SERP1Q9Y6X1 66 aa7.64□□□□□ -1.19
PRPF40B-206ENST00000547764 NEBP20929 6669 aa7.64□□□□□ -1.19
PRPF40B-206ENST00000547764 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
PRPF40B-206ENST00000547764 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.21
PRPF40B-206ENST00000547764 A0A1B0GU33 70 aa7.51□□□□□ -1.21
PRPF40B-206ENST00000547764 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
PRPF40B-206ENST00000547764 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
PRPF40B-206ENST00000547764 A0A0D9SG42 100 aa7.48□□□□□ -1.21
PRPF40B-206ENST00000547764 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
PRPF40B-206ENST00000547764 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
PRPF40B-206ENST00000547764 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
PRPF40B-206ENST00000547764 ATP5EP56381 51 aaPredicted RBP7.47□□□□□ -1.21
PRPF40B-206ENST00000547764 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
PRPF40B-206ENST00000547764 MDN1Q9NU22 5596 aa7.47□□□□□ -1.21
PRPF40B-206ENST00000547764 A0A1B0GU69 56 aa7.46□□□□□ -1.22
PRPF40B-206ENST00000547764 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
PRPF40B-206ENST00000547764 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
PRPF40B-206ENST00000547764 TMEM258P61165 79 aa7.35□□□□□ -1.23
PRPF40B-206ENST00000547764 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
PRPF40B-206ENST00000547764 SPRR2EP22531 72 aa7.32□□□□□ -1.24
PRPF40B-206ENST00000547764 SPRR2BP35325 72 aa7.32□□□□□ -1.24
PRPF40B-206ENST00000547764 SPRR2AP35326 72 aa7.32□□□□□ -1.24
PRPF40B-206ENST00000547764 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
PRPF40B-206ENST00000547764 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
PRPF40B-206ENST00000547764 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
PRPF40B-206ENST00000547764 A8MU10 97 aa7.26□□□□□ -1.25
PRPF40B-206ENST00000547764 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
PRPF40B-206ENST00000547764 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
PRPF40B-206ENST00000547764 KRTAP2-3P0C7H8 128 aa7.13□□□□□ -1.27
PRPF40B-206ENST00000547764 KRTAP2-4Q9BYR9 128 aa7.13□□□□□ -1.27
PRPF40B-206ENST00000547764 SPRR2DP22532 72 aa7.08□□□□□ -1.28
PRPF40B-206ENST00000547764 UQCR11O14957 56 aa7.05□□□□□ -1.28
PRPF40B-206ENST00000547764 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
PRPF40B-206ENST00000547764 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
PRPF40B-206ENST00000547764 MT1EP04732 61 aa6.96□□□□□ -1.3
PRPF40B-206ENST00000547764 TNP1P09430 55 aa6.92□□□□□ -1.3
PRPF40B-206ENST00000547764 KRTAP2-2Q9BYT5 123 aa6.92□□□□□ -1.3
PRPF40B-206ENST00000547764 KRTAP2-1Q9BYU5 128 aa6.92□□□□□ -1.3
PRPF40B-206ENST00000547764 V9GYY9 64 aa6.92□□□□□ -1.3
PRPF40B-206ENST00000547764 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
PRPF40B-206ENST00000547764 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
PRPF40B-206ENST00000547764 Q1T7F1 81 aa6.9□□□□□ -1.3
PRPF40B-206ENST00000547764 PSPHP1O15172 72 aa6.88□□□□□ -1.31
PRPF40B-206ENST00000547764 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
PRPF40B-206ENST00000547764 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
PRPF40B-206ENST00000547764 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
PRPF40B-206ENST00000547764 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
PRPF40B-206ENST00000547764 PCP4P48539 62 aa6.77□□□□□ -1.33
PRPF40B-206ENST00000547764 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms