RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 KRTAP19-1Q8IUB9 90 aa11.08□□□□□ -0.64
RBFOX1-209ENST00000547427 A8MUN3 132 aa11.05□□□□□ -0.64
RBFOX1-209ENST00000547427 H3BPC8 53 aa11.05□□□□□ -0.64
RBFOX1-209ENST00000547427 IMUPQ9GZP8 106 aa11.05□□□□□ -0.64
RBFOX1-209ENST00000547427 NDUFC1O43677 76 aa11.01□□□□□ -0.65
RBFOX1-209ENST00000547427 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
RBFOX1-209ENST00000547427 KRTAP19-6Q3LI70 58 aa10.91□□□□□ -0.66
RBFOX1-209ENST00000547427 FCGBPQ9Y6R7 5405 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-209ENST00000547427 SMIM20Q8N5G0 67 aa10.88□□□□□ -0.67
RBFOX1-209ENST00000547427 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.86□□□□□ -0.67
RBFOX1-209ENST00000547427 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
RBFOX1-209ENST00000547427 SPRR2GQ9BYE4 73 aa10.83□□□□□ -0.68
RBFOX1-209ENST00000547427 H0YAA0 97 aa10.8□□□□□ -0.68
RBFOX1-209ENST00000547427 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
RBFOX1-209ENST00000547427 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
RBFOX1-209ENST00000547427 Q5VV11 94 aa10.78□□□□□ -0.68
RBFOX1-209ENST00000547427 ADM2Q7Z4H4 148 aa10.73□□□□□ -0.69
RBFOX1-209ENST00000547427 KRTAP19-8Q3LI54 63 aa10.71□□□□□ -0.69
RBFOX1-209ENST00000547427 MT1BP07438 61 aa10.69□□□□□ -0.7
RBFOX1-209ENST00000547427 KRTAP9-7A8MTY7 169 aa10.68□□□□□ -0.7
RBFOX1-209ENST00000547427 ACYP2P14621 99 aa10.63□□□□□ -0.71
RBFOX1-209ENST00000547427 SNURFQ9Y675 71 aa10.61□□□□□ -0.71
RBFOX1-209ENST00000547427 A6NN06 94 aa10.57□□□□□ -0.72
RBFOX1-209ENST00000547427 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
RBFOX1-209ENST00000547427 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
RBFOX1-209ENST00000547427 SPTSSBQ8NFR3 76 aa10.49□□□□□ -0.73
RBFOX1-209ENST00000547427 P0C880 135 aa10.48□□□□□ -0.73
RBFOX1-209ENST00000547427 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
RBFOX1-209ENST00000547427 R4GN34 69 aa10.47□□□□□ -0.73
RBFOX1-209ENST00000547427 MACF1Q9UPN3 7388 aaKnown RBP10.47□□□□□ -0.73
RBFOX1-209ENST00000547427 KRTAP10-5P60370 271 aa10.42□□□□□ -0.74
RBFOX1-209ENST00000547427 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
RBFOX1-209ENST00000547427 M0QZ58 72 aa10.38□□□□□ -0.75
RBFOX1-209ENST00000547427 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
RBFOX1-209ENST00000547427 PLAC4Q8WY50 150 aa10.31□□□□□ -0.76
RBFOX1-209ENST00000547427 COX7CP15954 63 aa10.28□□□□□ -0.76
RBFOX1-209ENST00000547427 SYNE2Q8WXH0 6885 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-209ENST00000547427 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
RBFOX1-209ENST00000547427 KRTAP6-3Q3LI67 103 aa10.23□□□□□ -0.77
RBFOX1-209ENST00000547427 PRO2289Q9P1D8 64 aa10.2□□□□□ -0.78
RBFOX1-209ENST00000547427 COA5Q86WW8 74 aa10.13□□□□□ -0.79
RBFOX1-209ENST00000547427 MT1XP80297 61 aa10.08□□□□□ -0.8
RBFOX1-209ENST00000547427 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
RBFOX1-209ENST00000547427 H7BZZ5 65 aa10.05□□□□□ -0.8
RBFOX1-209ENST00000547427 CYSTM1Q9H1C7 97 aa10.04□□□□□ -0.8
RBFOX1-209ENST00000547427 SEC61GP60059 68 aa9.95□□□□□ -0.82
RBFOX1-209ENST00000547427 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
RBFOX1-209ENST00000547427 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
RBFOX1-209ENST00000547427 KRTAP5-9P26371 169 aa9.83□□□□□ -0.84
RBFOX1-209ENST00000547427 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
RBFOX1-209ENST00000547427 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
RBFOX1-209ENST00000547427 MUC12Q9UKN1 5478 aa9.73□□□□□ -0.85
RBFOX1-209ENST00000547427 KMT2DO14686 5537 aa9.72□□□□□ -0.85
RBFOX1-209ENST00000547427 KRTAP8-1Q8IUC2 63 aa9.71□□□□□ -0.86
RBFOX1-209ENST00000547427 A0A1B0GU33 70 aa9.7□□□□□ -0.86
RBFOX1-209ENST00000547427 CAMK2N1Q7Z7J9 78 aa9.68□□□□□ -0.86
RBFOX1-209ENST00000547427 A0A0D9SG42 100 aa9.67□□□□□ -0.86
RBFOX1-209ENST00000547427 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
RBFOX1-209ENST00000547427 SPATA8Q6RVD6 105 aa9.66□□□□□ -0.86
RBFOX1-209ENST00000547427 SPRR2FQ96RM1 72 aa9.66□□□□□ -0.86
RBFOX1-209ENST00000547427 A0A1B0GU69 56 aa9.65□□□□□ -0.86
RBFOX1-209ENST00000547427 KRTAP10-7P60409 375 aaPredicted RBP9.65□□□□□ -0.86
RBFOX1-209ENST00000547427 NEBP20929 6669 aa9.62□□□□□ -0.87
RBFOX1-209ENST00000547427 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
RBFOX1-209ENST00000547427 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
RBFOX1-209ENST00000547427 KRTAP10-12P60413 245 aa9.58□□□□□ -0.88
RBFOX1-209ENST00000547427 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
RBFOX1-209ENST00000547427 MDN1Q9NU22 5596 aa9.49□□□□□ -0.89
RBFOX1-209ENST00000547427 SPRR2EP22531 72 aa9.47□□□□□ -0.89
RBFOX1-209ENST00000547427 SPRR2BP35325 72 aa9.47□□□□□ -0.89
RBFOX1-209ENST00000547427 SPRR2AP35326 72 aa9.47□□□□□ -0.89
RBFOX1-209ENST00000547427 TMEM258P61165 79 aa9.47□□□□□ -0.89
RBFOX1-209ENST00000547427 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
RBFOX1-209ENST00000547427 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
RBFOX1-209ENST00000547427 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
RBFOX1-209ENST00000547427 KRTAP20-1Q3LI63 56 aa9.4□□□□□ -0.9
RBFOX1-209ENST00000547427 A8MU10 97 aa9.33□□□□□ -0.92
RBFOX1-209ENST00000547427 LINC01558Q9Y6Z2 57 aa9.33□□□□□ -0.92
RBFOX1-209ENST00000547427 LCE1AQ5T7P2 110 aa9.32□□□□□ -0.92
RBFOX1-209ENST00000547427 KRTAP2-3P0C7H8 128 aa9.21□□□□□ -0.94
RBFOX1-209ENST00000547427 KRTAP2-4Q9BYR9 128 aa9.21□□□□□ -0.94
RBFOX1-209ENST00000547427 SPRR2DP22532 72 aa9.16□□□□□ -0.94
RBFOX1-209ENST00000547427 UQCR11O14957 56 aa9.11□□□□□ -0.95
RBFOX1-209ENST00000547427 KRTAP19-7Q3SYF9 63 aa8.99□□□□□ -0.97
RBFOX1-209ENST00000547427 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
RBFOX1-209ENST00000547427 TNP1P09430 55 aa8.96□□□□□ -0.98
RBFOX1-209ENST00000547427 V9GYY9 64 aa8.95□□□□□ -0.98
RBFOX1-209ENST00000547427 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
RBFOX1-209ENST00000547427 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
RBFOX1-209ENST00000547427 MT1EP04732 61 aa8.92□□□□□ -0.98
RBFOX1-209ENST00000547427 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
RBFOX1-209ENST00000547427 PSPHP1O15172 72 aa8.88□□□□□ -0.99
RBFOX1-209ENST00000547427 KRTAP19-5Q3LI72 72 aa8.88□□□□□ -0.99
RBFOX1-209ENST00000547427 LCE3BQ5TA77 95 aa8.87□□□□□ -0.99
RBFOX1-209ENST00000547427 Q1T7F1 81 aa8.86□□□□□ -0.99
RBFOX1-209ENST00000547427 KRTAP19-3Q7Z4W3 81 aa8.82□□□□□ -1
RBFOX1-209ENST00000547427 LCE3AQ5TA76 89 aa8.79□□□□□ -1
RBFOX1-209ENST00000547427 LCE5AQ5TCM9 118 aa8.79□□□□□ -1
RBFOX1-209ENST00000547427 K7ERS5 55 aa8.77□□□□□ -1.01
RBFOX1-209ENST00000547427 PCP4P48539 62 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms