RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
COL2A1-209ENST00000546974 MT-ATP8P03928 68 aa6.41□□□□□ -1.38
COL2A1-209ENST00000546974 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
COL2A1-209ENST00000546974 CYP4F30PQ9H0H9 118 aa6.41□□□□□ -1.38
COL2A1-209ENST00000546974 A0A087WVE0 104 aa6.4□□□□□ -1.38
COL2A1-209ENST00000546974 IMUPQ9GZP8 106 aa6.39□□□□□ -1.39
COL2A1-209ENST00000546974 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
COL2A1-209ENST00000546974 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
COL2A1-209ENST00000546974 TRAV22A0A0B4J277 110 aa6.36□□□□□ -1.39
COL2A1-209ENST00000546974 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
COL2A1-209ENST00000546974 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
COL2A1-209ENST00000546974 NEBP20929 6669 aa6.33□□□□□ -1.4
COL2A1-209ENST00000546974 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
COL2A1-209ENST00000546974 UQCRQO14949 82 aa6.27□□□□□ -1.41
COL2A1-209ENST00000546974 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
COL2A1-209ENST00000546974 H0YAA0 97 aa6.25□□□□□ -1.41
COL2A1-209ENST00000546974 ATOX1O00244 68 aa6.25□□□□□ -1.41
COL2A1-209ENST00000546974 NDUFC1O43677 76 aa6.25□□□□□ -1.41
COL2A1-209ENST00000546974 H0Y9P7 68 aa6.24□□□□□ -1.41
COL2A1-209ENST00000546974 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
COL2A1-209ENST00000546974 KMT2DO14686 5537 aa6.22□□□□□ -1.41
COL2A1-209ENST00000546974 A8MUN3 132 aa6.2□□□□□ -1.42
COL2A1-209ENST00000546974 SCGB1A1P11684 91 aa6.16□□□□□ -1.42
COL2A1-209ENST00000546974 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
COL2A1-209ENST00000546974 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
COL2A1-209ENST00000546974 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
COL2A1-209ENST00000546974 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
COL2A1-209ENST00000546974 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
COL2A1-209ENST00000546974 H3BPC8 53 aa6.11□□□□□ -1.43
COL2A1-209ENST00000546974 MP68P56378 58 aa6.08□□□□□ -1.44
COL2A1-209ENST00000546974 SERP2Q8N6R1 65 aa6.08□□□□□ -1.44
COL2A1-209ENST00000546974 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
COL2A1-209ENST00000546974 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
COL2A1-209ENST00000546974 MT1XP80297 61 aa6.04□□□□□ -1.44
COL2A1-209ENST00000546974 R4GN34 69 aa6.01□□□□□ -1.45
COL2A1-209ENST00000546974 C20orf197Q8N268 126 aa6□□□□□ -1.45
COL2A1-209ENST00000546974 P0C880 135 aa5.99□□□□□ -1.45
COL2A1-209ENST00000546974 COX7CP15954 63 aa5.99□□□□□ -1.45
COL2A1-209ENST00000546974 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
COL2A1-209ENST00000546974 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
COL2A1-209ENST00000546974 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
COL2A1-209ENST00000546974 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
COL2A1-209ENST00000546974 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
COL2A1-209ENST00000546974 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
COL2A1-209ENST00000546974 M0QZ58 72 aa5.94□□□□□ -1.46
COL2A1-209ENST00000546974 SPRR2EP22531 72 aa5.93□□□□□ -1.46
COL2A1-209ENST00000546974 SPRR2BP35325 72 aa5.93□□□□□ -1.46
COL2A1-209ENST00000546974 SPRR2AP35326 72 aa5.93□□□□□ -1.46
COL2A1-209ENST00000546974 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
COL2A1-209ENST00000546974 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
COL2A1-209ENST00000546974 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
COL2A1-209ENST00000546974 CYSTM1Q9H1C7 97 aa5.91□□□□□ -1.46
COL2A1-209ENST00000546974 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
COL2A1-209ENST00000546974 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
COL2A1-209ENST00000546974 H7BZZ5 65 aa5.85□□□□□ -1.47
COL2A1-209ENST00000546974 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
COL2A1-209ENST00000546974 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
COL2A1-209ENST00000546974 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
COL2A1-209ENST00000546974 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
COL2A1-209ENST00000546974 ACYP2P14621 99 aa5.8□□□□□ -1.48
COL2A1-209ENST00000546974 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
COL2A1-209ENST00000546974 SPTSSBQ8NFR3 76 aa5.76□□□□□ -1.49
COL2A1-209ENST00000546974 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
COL2A1-209ENST00000546974 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
COL2A1-209ENST00000546974 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
COL2A1-209ENST00000546974 SPRR2DP22532 72 aa5.73□□□□□ -1.49
COL2A1-209ENST00000546974 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
COL2A1-209ENST00000546974 COA5Q86WW8 74 aa5.65□□□□□ -1.5
COL2A1-209ENST00000546974 TMEM258P61165 79 aa5.64□□□□□ -1.51
COL2A1-209ENST00000546974 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
COL2A1-209ENST00000546974 PCP4P48539 62 aa5.6□□□□□ -1.51
COL2A1-209ENST00000546974 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
COL2A1-209ENST00000546974 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
COL2A1-209ENST00000546974 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
COL2A1-209ENST00000546974 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
COL2A1-209ENST00000546974 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
COL2A1-209ENST00000546974 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
COL2A1-209ENST00000546974 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
COL2A1-209ENST00000546974 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
COL2A1-209ENST00000546974 MT1EP04732 61 aa5.37□□□□□ -1.55
COL2A1-209ENST00000546974 SEC61GP60059 68 aa5.37□□□□□ -1.55
COL2A1-209ENST00000546974 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
COL2A1-209ENST00000546974 A0A0D9SG42 100 aa5.35□□□□□ -1.55
COL2A1-209ENST00000546974 RPS28P62857 69 aaKnown RBP5.35□□□□□ -1.55
COL2A1-209ENST00000546974 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
COL2A1-209ENST00000546974 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
COL2A1-209ENST00000546974 A0A1B0GU69 56 aa5.3□□□□□ -1.56
COL2A1-209ENST00000546974 A0A1B0GU33 70 aa5.29□□□□□ -1.56
COL2A1-209ENST00000546974 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
COL2A1-209ENST00000546974 Q1T7F1 81 aa5.27□□□□□ -1.57
COL2A1-209ENST00000546974 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
COL2A1-209ENST00000546974 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
COL2A1-209ENST00000546974 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
COL2A1-209ENST00000546974 MT1GP13640 62 aa5.22□□□□□ -1.57
COL2A1-209ENST00000546974 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
COL2A1-209ENST00000546974 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
COL2A1-209ENST00000546974 V9GYY9 64 aa5.21□□□□□ -1.58
COL2A1-209ENST00000546974 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
COL2A1-209ENST00000546974 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
COL2A1-209ENST00000546974 PSPHP1O15172 72 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms