RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 OCR1Q9BZK8 76 aa7.26□□□□□ -1.25
DDX54-204ENST00000546898 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
DDX54-204ENST00000546898 MP68P56378 58 aa7.24□□□□□ -1.25
DDX54-204ENST00000546898 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
DDX54-204ENST00000546898 A8MUN3 132 aa7.23□□□□□ -1.25
DDX54-204ENST00000546898 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
DDX54-204ENST00000546898 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
DDX54-204ENST00000546898 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
DDX54-204ENST00000546898 H3BPC8 53 aa7.17□□□□□ -1.26
DDX54-204ENST00000546898 NDUFC1O43677 76 aa7.17□□□□□ -1.26
DDX54-204ENST00000546898 IMUPQ9GZP8 106 aa7.15□□□□□ -1.26
DDX54-204ENST00000546898 SCGB1A1P11684 91 aa7.13□□□□□ -1.27
DDX54-204ENST00000546898 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
DDX54-204ENST00000546898 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
DDX54-204ENST00000546898 H0YAA0 97 aa7.12□□□□□ -1.27
DDX54-204ENST00000546898 Q5VV11 94 aa7.12□□□□□ -1.27
DDX54-204ENST00000546898 MT1BP07438 61 aa7.1□□□□□ -1.27
DDX54-204ENST00000546898 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
DDX54-204ENST00000546898 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
DDX54-204ENST00000546898 KRTAP6-3Q3LI67 103 aa7.01□□□□□ -1.29
DDX54-204ENST00000546898 A6NN06 94 aa7□□□□□ -1.29
DDX54-204ENST00000546898 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
DDX54-204ENST00000546898 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
DDX54-204ENST00000546898 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
DDX54-204ENST00000546898 PCP4P48539 62 aa6.96□□□□□ -1.3
DDX54-204ENST00000546898 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
DDX54-204ENST00000546898 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
DDX54-204ENST00000546898 ACYP2P14621 99 aa6.86□□□□□ -1.31
DDX54-204ENST00000546898 R4GN34 69 aa6.84□□□□□ -1.31
DDX54-204ENST00000546898 P0C880 135 aa6.83□□□□□ -1.32
DDX54-204ENST00000546898 NEBP20929 6669 aa6.81□□□□□ -1.32
DDX54-204ENST00000546898 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
DDX54-204ENST00000546898 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
DDX54-204ENST00000546898 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
DDX54-204ENST00000546898 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
DDX54-204ENST00000546898 M0QZ58 72 aa6.77□□□□□ -1.33
DDX54-204ENST00000546898 SERP2Q8N6R1 65 aa6.75□□□□□ -1.33
DDX54-204ENST00000546898 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
DDX54-204ENST00000546898 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
DDX54-204ENST00000546898 ANAPC13Q9BS18 74 aa6.74□□□□□ -1.33
DDX54-204ENST00000546898 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
DDX54-204ENST00000546898 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
DDX54-204ENST00000546898 MT1XP80297 61 aa6.67□□□□□ -1.34
DDX54-204ENST00000546898 KRTAP20-1Q3LI63 56 aa6.64□□□□□ -1.35
DDX54-204ENST00000546898 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
DDX54-204ENST00000546898 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
DDX54-204ENST00000546898 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
DDX54-204ENST00000546898 COX7CP15954 63 aa6.59□□□□□ -1.35
DDX54-204ENST00000546898 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
DDX54-204ENST00000546898 KMT2DO14686 5537 aa6.53□□□□□ -1.36
DDX54-204ENST00000546898 COA5Q86WW8 74 aa6.51□□□□□ -1.37
DDX54-204ENST00000546898 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
DDX54-204ENST00000546898 H7BZZ5 65 aa6.44□□□□□ -1.38
DDX54-204ENST00000546898 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
DDX54-204ENST00000546898 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
DDX54-204ENST00000546898 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
DDX54-204ENST00000546898 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
DDX54-204ENST00000546898 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.38
DDX54-204ENST00000546898 SEC61GP60059 68 aa6.4□□□□□ -1.38
DDX54-204ENST00000546898 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.38
DDX54-204ENST00000546898 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
DDX54-204ENST00000546898 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
DDX54-204ENST00000546898 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
DDX54-204ENST00000546898 TMEM258P61165 79 aa6.34□□□□□ -1.39
DDX54-204ENST00000546898 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
DDX54-204ENST00000546898 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
DDX54-204ENST00000546898 SPRR2EP22531 72 aa6.31□□□□□ -1.4
DDX54-204ENST00000546898 SPRR2BP35325 72 aa6.31□□□□□ -1.4
DDX54-204ENST00000546898 SPRR2AP35326 72 aa6.31□□□□□ -1.4
DDX54-204ENST00000546898 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
DDX54-204ENST00000546898 A0A1B0GU33 70 aa6.26□□□□□ -1.41
DDX54-204ENST00000546898 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
DDX54-204ENST00000546898 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
DDX54-204ENST00000546898 A0A0D9SG42 100 aa6.22□□□□□ -1.41
DDX54-204ENST00000546898 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
DDX54-204ENST00000546898 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
DDX54-204ENST00000546898 A0A1B0GU69 56 aa6.19□□□□□ -1.42
DDX54-204ENST00000546898 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
DDX54-204ENST00000546898 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
DDX54-204ENST00000546898 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
DDX54-204ENST00000546898 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
DDX54-204ENST00000546898 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
DDX54-204ENST00000546898 SPRR2DP22532 72 aa6.1□□□□□ -1.43
DDX54-204ENST00000546898 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
DDX54-204ENST00000546898 A8MU10 97 aa6□□□□□ -1.45
DDX54-204ENST00000546898 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
DDX54-204ENST00000546898 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
DDX54-204ENST00000546898 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
DDX54-204ENST00000546898 MT1EP04732 61 aa5.92□□□□□ -1.46
DDX54-204ENST00000546898 Q1T7F1 81 aa5.88□□□□□ -1.47
DDX54-204ENST00000546898 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
DDX54-204ENST00000546898 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
DDX54-204ENST00000546898 UQCR11O14957 56 aa5.84□□□□□ -1.47
DDX54-204ENST00000546898 TNP1P09430 55 aa5.83□□□□□ -1.48
DDX54-204ENST00000546898 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
DDX54-204ENST00000546898 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
DDX54-204ENST00000546898 V9GYY9 64 aa5.83□□□□□ -1.48
DDX54-204ENST00000546898 GPR98Q8WXG9 6306 aa5.77□□□□□ -1.49
DDX54-204ENST00000546898 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
DDX54-204ENST00000546898 PSPHP1O15172 72 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms