RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	SCGB1A1	P11684	91 aa		7.4	□□□□□ -1.22
HMBS-222	ENST00000545621		A8MUN3	132 aa		7.39	□□□□□ -1.23
HMBS-222	ENST00000545621	FAM236A	A0A1B0GUQ0	79 aa		7.31	□□□□□ -1.24
HMBS-222	ENST00000545621	FAM236B	A0A1B0GV22	79 aa		7.31	□□□□□ -1.24
HMBS-222	ENST00000545621	KRTAP19-1	Q8IUB9	90 aa		7.3	□□□□□ -1.24
HMBS-222	ENST00000545621	SMIM20	Q8N5G0	67 aa		7.3	□□□□□ -1.24
HMBS-222	ENST00000545621	TRAV7	A0A075B6U4	112 aa		7.29	□□□□□ -1.24
HMBS-222	ENST00000545621	NDUFC1	O43677	76 aa		7.27	□□□□□ -1.25
HMBS-222	ENST00000545621	KRTAP19-6	Q3LI70	58 aa		7.25	□□□□□ -1.25
HMBS-222	ENST00000545621	DMAC1	Q96GE9	116 aa		7.25	□□□□□ -1.25
HMBS-222	ENST00000545621	SPRR2G	Q9BYE4	73 aa		7.25	□□□□□ -1.25
HMBS-222	ENST00000545621		H0YAA0	97 aa		7.24	□□□□□ -1.25
HMBS-222	ENST00000545621	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.23	□□□□□ -1.25
HMBS-222	ENST00000545621	KRTAP19-8	Q3LI54	63 aa		7.17	□□□□□ -1.26
HMBS-222	ENST00000545621	CRIPT	Q9P021	101 aa		7.17	□□□□□ -1.26
HMBS-222	ENST00000545621	MT1B	P07438	61 aa		7.14	□□□□□ -1.27
HMBS-222	ENST00000545621	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.13	□□□□□ -1.27
HMBS-222	ENST00000545621	SERP2	Q8N6R1	65 aa		7.11	□□□□□ -1.27
HMBS-222	ENST00000545621		Q5VV11	94 aa		7.09	□□□□□ -1.27
HMBS-222	ENST00000545621	ADM2	Q7Z4H4	148 aa		7.09	□□□□□ -1.27
HMBS-222	ENST00000545621	SNURF	Q9Y675	71 aa		7.09	□□□□□ -1.27
HMBS-222	ENST00000545621	ACYP2	P14621	99 aa		7.08	□□□□□ -1.28
HMBS-222	ENST00000545621	C20orf197	Q8N268	126 aa		7.04	□□□□□ -1.28
HMBS-222	ENST00000545621	SPANXA2-OT1	Q8N9U9	137 aa		7.04	□□□□□ -1.28
HMBS-222	ENST00000545621	KRTAP3-2	Q9BYR7	98 aa		6.99	□□□□□ -1.29
HMBS-222	ENST00000545621		P0C880	135 aa		6.98	□□□□□ -1.29
HMBS-222	ENST00000545621	KRTAP9-7	A8MTY7	169 aa		6.97	□□□□□ -1.29
HMBS-222	ENST00000545621	MACF1	Q9UPN3	7388 aa	Known RBP	6.95	□□□□□ -1.3
HMBS-222	ENST00000545621	COX7C	P15954	63 aa		6.94	□□□□□ -1.3
HMBS-222	ENST00000545621	KRTAP10-5	P60370	271 aa		6.93	□□□□□ -1.3
HMBS-222	ENST00000545621	SPTSSB	Q8NFR3	76 aa		6.93	□□□□□ -1.3
HMBS-222	ENST00000545621		A6NN06	94 aa		6.92	□□□□□ -1.3
HMBS-222	ENST00000545621	CHKB-CPT1B	H3BT56	60 aa		6.89	□□□□□ -1.31
HMBS-222	ENST00000545621		R4GN34	69 aa		6.89	□□□□□ -1.31
HMBS-222	ENST00000545621		M0QZ58	72 aa		6.84	□□□□□ -1.31
HMBS-222	ENST00000545621		H7BZZ5	65 aa		6.83	□□□□□ -1.32
HMBS-222	ENST00000545621	CYSTM1	Q9H1C7	97 aa		6.82	□□□□□ -1.32
HMBS-222	ENST00000545621	SYNE2	Q8WXH0	6885 aa	Known RBP	6.82	□□□□□ -1.32
HMBS-222	ENST00000545621	COA5	Q86WW8	74 aa		6.78	□□□□□ -1.32
HMBS-222	ENST00000545621	PLAC4	Q8WY50	150 aa		6.75	□□□□□ -1.33
HMBS-222	ENST00000545621	ANAPC13	Q9BS18	74 aa		6.75	□□□□□ -1.33
HMBS-222	ENST00000545621	KRTAP6-3	Q3LI67	103 aa		6.74	□□□□□ -1.33
HMBS-222	ENST00000545621	MT1X	P80297	61 aa		6.73	□□□□□ -1.33
HMBS-222	ENST00000545621	PRO2289	Q9P1D8	64 aa		6.7	□□□□□ -1.34
HMBS-222	ENST00000545621	LINC01554	Q52M75	96 aa		6.69	□□□□□ -1.34
HMBS-222	ENST00000545621	CCDC179	H3BU77	68 aa		6.63	□□□□□ -1.35
HMBS-222	ENST00000545621	KRTAP13-4	Q3LI77	160 aa		6.62	□□□□□ -1.35
HMBS-222	ENST00000545621	KRTAP12-2	P59991	146 aa		6.56	□□□□□ -1.36
HMBS-222	ENST00000545621	KRTAP5-9	P26371	169 aa		6.55	□□□□□ -1.36
HMBS-222	ENST00000545621	SEC61G	P60059	68 aa		6.55	□□□□□ -1.36
HMBS-222	ENST00000545621	SERP1	Q9Y6X1	66 aa		6.54	□□□□□ -1.36
HMBS-222	ENST00000545621	ATP5E	P56381	51 aa	Predicted RBP	6.52	□□□□□ -1.37
HMBS-222	ENST00000545621	KMT2D	O14686	5537 aa		6.51	□□□□□ -1.37
HMBS-222	ENST00000545621	MUC12	Q9UKN1	5478 aa		6.47	□□□□□ -1.37
HMBS-222	ENST00000545621		A0A1B0GU33	70 aa		6.45	□□□□□ -1.38
HMBS-222	ENST00000545621	TMEM258	P61165	79 aa		6.42	□□□□□ -1.38
HMBS-222	ENST00000545621		A0A1B0GU69	56 aa		6.41	□□□□□ -1.38
HMBS-222	ENST00000545621	KRTAP10-7	P60409	375 aa	Predicted RBP	6.41	□□□□□ -1.38
HMBS-222	ENST00000545621	KRTAP10-12	P60413	245 aa		6.41	□□□□□ -1.38
HMBS-222	ENST00000545621	SPATA8	Q6RVD6	105 aa		6.41	□□□□□ -1.38
HMBS-222	ENST00000545621	NEB	P20929	6669 aa		6.37	□□□□□ -1.39
HMBS-222	ENST00000545621	KRTAP4-8	A0A0G2JLE6	195 aa		6.36	□□□□□ -1.39
HMBS-222	ENST00000545621	KRTAP8-1	Q8IUC2	63 aa		6.36	□□□□□ -1.39
HMBS-222	ENST00000545621	KRTAP4-8	Q9BYQ9	185 aa		6.36	□□□□□ -1.39
HMBS-222	ENST00000545621		A0A0D9SG42	100 aa		6.34	□□□□□ -1.39
HMBS-222	ENST00000545621	CAMK2N1	Q7Z7J9	78 aa		6.33	□□□□□ -1.4
HMBS-222	ENST00000545621	KRTAP12-1	P59990	96 aa		6.32	□□□□□ -1.4
HMBS-222	ENST00000545621	SPRR2F	Q96RM1	72 aa		6.32	□□□□□ -1.4
HMBS-222	ENST00000545621	LINC01558	Q9Y6Z2	57 aa		6.3	□□□□□ -1.4
HMBS-222	ENST00000545621	MDN1	Q9NU22	5596 aa		6.28	□□□□□ -1.4
HMBS-222	ENST00000545621	SMIM26	A0A096LP01	95 aa		6.27	□□□□□ -1.41
HMBS-222	ENST00000545621	PRR15L	Q9BU68	103 aa		6.26	□□□□□ -1.41
HMBS-222	ENST00000545621	SPINT4	Q6UDR6	99 aa		6.25	□□□□□ -1.41
HMBS-222	ENST00000545621		A8MU10	97 aa		6.21	□□□□□ -1.42
HMBS-222	ENST00000545621	SPRR2E	P22531	72 aa		6.18	□□□□□ -1.42
HMBS-222	ENST00000545621	SPRR2B	P35325	72 aa		6.18	□□□□□ -1.42
HMBS-222	ENST00000545621	SPRR2A	P35326	72 aa		6.18	□□□□□ -1.42
HMBS-222	ENST00000545621	LCE1A	Q5T7P2	110 aa		6.18	□□□□□ -1.42
HMBS-222	ENST00000545621	KRTAP20-1	Q3LI63	56 aa		6.11	□□□□□ -1.43
HMBS-222	ENST00000545621	UQCR11	O14957	56 aa		6.08	□□□□□ -1.44
HMBS-222	ENST00000545621	KRTAP2-3	P0C7H8	128 aa		6.03	□□□□□ -1.44
HMBS-222	ENST00000545621	KRTAP19-7	Q3SYF9	63 aa		6.03	□□□□□ -1.44
HMBS-222	ENST00000545621	KRTAP2-4	Q9BYR9	128 aa		6.03	□□□□□ -1.44
HMBS-222	ENST00000545621		Q1T7F1	81 aa		6.02	□□□□□ -1.45
HMBS-222	ENST00000545621	C10orf95	Q9H7T3	257 aa		6.02	□□□□□ -1.45
HMBS-222	ENST00000545621		V9GYY9	64 aa		6.02	□□□□□ -1.45
HMBS-222	ENST00000545621	SPRR2D	P22532	72 aa		5.96	□□□□□ -1.46
HMBS-222	ENST00000545621	MIR22HG	Q0VDD5	57 aa		5.95	□□□□□ -1.46
HMBS-222	ENST00000545621	MT1E	P04732	61 aa		5.94	□□□□□ -1.46
HMBS-222	ENST00000545621	TNP1	P09430	55 aa		5.93	□□□□□ -1.46
HMBS-222	ENST00000545621	PCP4	P48539	62 aa		5.93	□□□□□ -1.46
HMBS-222	ENST00000545621	PSPHP1	O15172	72 aa		5.92	□□□□□ -1.46
HMBS-222	ENST00000545621	RPS28	P62857	69 aa	Known RBP	5.88	□□□□□ -1.47
HMBS-222	ENST00000545621	KRTAP19-5	Q3LI72	72 aa		5.88	□□□□□ -1.47
HMBS-222	ENST00000545621	LCE5A	Q5TCM9	118 aa		5.87	□□□□□ -1.47
HMBS-222	ENST00000545621	KRTAP19-3	Q7Z4W3	81 aa		5.86	□□□□□ -1.47
HMBS-222	ENST00000545621	LCE3A	Q5TA76	89 aa		5.85	□□□□□ -1.47
HMBS-222	ENST00000545621	KRTAP2-2	Q9BYT5	123 aa		5.85	□□□□□ -1.47
HMBS-222	ENST00000545621	KRTAP2-1	Q9BYU5	128 aa		5.85	□□□□□ -1.47
HMBS-222	ENST00000545621	LCE3B	Q5TA77	95 aa		5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms