RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 Q5W150 140 aa3.68□□□□□ -1.82
SNHG1-223ENST00000545440 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
SNHG1-223ENST00000545440 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
SNHG1-223ENST00000545440 GTF2H5Q6ZYL4 71 aa3.66□□□□□ -1.82
SNHG1-223ENST00000545440 USH2AO75445 5202 aa3.65□□□□□ -1.83
SNHG1-223ENST00000545440 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
SNHG1-223ENST00000545440 F8W1H4 67 aa3.63□□□□□ -1.83
SNHG1-223ENST00000545440 C4orf26Q17RF5 130 aa3.61□□□□□ -1.83
SNHG1-223ENST00000545440 ETDBQ3ZM63 59 aa3.61□□□□□ -1.83
SNHG1-223ENST00000545440 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
SNHG1-223ENST00000545440 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
SNHG1-223ENST00000545440 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
SNHG1-223ENST00000545440 FAM240AA0A1B0GVK7 77 aa3.56□□□□□ -1.84
SNHG1-223ENST00000545440 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
SNHG1-223ENST00000545440 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-223ENST00000545440 ACYP1P07311 99 aa3.55□□□□□ -1.84
SNHG1-223ENST00000545440 ATP5EP2Q5VTU8 51 aa3.55□□□□□ -1.84
SNHG1-223ENST00000545440 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
SNHG1-223ENST00000545440 S4R3F8 94 aa3.55□□□□□ -1.84
SNHG1-223ENST00000545440 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
SNHG1-223ENST00000545440 TRAV22A0A0B4J277 110 aa3.53□□□□□ -1.84
SNHG1-223ENST00000545440 SEC61GP60059 68 aa3.52□□□□□ -1.85
SNHG1-223ENST00000545440 CSAG1Q6PB30 78 aa3.52□□□□□ -1.85
SNHG1-223ENST00000545440 LCA10Q71F78 164 aa3.52□□□□□ -1.85
SNHG1-223ENST00000545440 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
SNHG1-223ENST00000545440 FAM236AA0A1B0GUQ0 79 aa3.51□□□□□ -1.85
SNHG1-223ENST00000545440 FAM236BA0A1B0GV22 79 aa3.51□□□□□ -1.85
SNHG1-223ENST00000545440 LOC101927531A0A1B0GV80 90 aa3.51□□□□□ -1.85
SNHG1-223ENST00000545440 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
SNHG1-223ENST00000545440 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
SNHG1-223ENST00000545440 ATOX1O00244 68 aa3.48□□□□□ -1.85
SNHG1-223ENST00000545440 UQCRQO14949 82 aa3.48□□□□□ -1.85
SNHG1-223ENST00000545440 HIST1H4AP62805 103 aaKnown RBP3.48□□□□□ -1.85
SNHG1-223ENST00000545440 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
SNHG1-223ENST00000545440 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
SNHG1-223ENST00000545440 H0Y9P7 68 aa3.45□□□□□ -1.86
SNHG1-223ENST00000545440 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
SNHG1-223ENST00000545440 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
SNHG1-223ENST00000545440 Q5VV11 94 aa3.44□□□□□ -1.86
SNHG1-223ENST00000545440 A0A087WVE0 104 aa3.43□□□□□ -1.86
SNHG1-223ENST00000545440 MT1BP07438 61 aa3.43□□□□□ -1.86
SNHG1-223ENST00000545440 A8MUN3 132 aa3.42□□□□□ -1.86
SNHG1-223ENST00000545440 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
SNHG1-223ENST00000545440 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
SNHG1-223ENST00000545440 A0A1B0GV90 55 aa3.4□□□□□ -1.87
SNHG1-223ENST00000545440 A6NN06 94 aa3.4□□□□□ -1.87
SNHG1-223ENST00000545440 H0YAA0 97 aa3.4□□□□□ -1.87
SNHG1-223ENST00000545440 NDUFC1O43677 76 aa3.4□□□□□ -1.87
SNHG1-223ENST00000545440 IMUPQ9GZP8 106 aa3.4□□□□□ -1.87
SNHG1-223ENST00000545440 MP68P56378 58 aa3.39□□□□□ -1.87
SNHG1-223ENST00000545440 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SNHG1-223ENST00000545440 LINC00208Q96KT6 92 aa3.39□□□□□ -1.87
SNHG1-223ENST00000545440 J3QR89 54 aa3.37□□□□□ -1.87
SNHG1-223ENST00000545440 H3BPC8 53 aa3.35□□□□□ -1.87
SNHG1-223ENST00000545440 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
SNHG1-223ENST00000545440 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
SNHG1-223ENST00000545440 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
SNHG1-223ENST00000545440 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
SNHG1-223ENST00000545440 SCGB1A1P11684 91 aa3.3□□□□□ -1.88
SNHG1-223ENST00000545440 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SNHG1-223ENST00000545440 C20orf197Q8N268 126 aa3.28□□□□□ -1.88
SNHG1-223ENST00000545440 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
SNHG1-223ENST00000545440 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
SNHG1-223ENST00000545440 P0C880 135 aa3.25□□□□□ -1.89
SNHG1-223ENST00000545440 SMIM20Q8N5G0 67 aa3.25□□□□□ -1.89
SNHG1-223ENST00000545440 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
SNHG1-223ENST00000545440 R4GN34 69 aa3.25□□□□□ -1.89
SNHG1-223ENST00000545440 K7ERU9 68 aa3.24□□□□□ -1.89
SNHG1-223ENST00000545440 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
SNHG1-223ENST00000545440 MT1XP80297 61 aa3.23□□□□□ -1.89
SNHG1-223ENST00000545440 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
SNHG1-223ENST00000545440 NEBP20929 6669 aa3.22□□□□□ -1.89
SNHG1-223ENST00000545440 M0QZ58 72 aa3.22□□□□□ -1.89
SNHG1-223ENST00000545440 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
SNHG1-223ENST00000545440 ACYP2P14621 99 aa3.21□□□□□ -1.9
SNHG1-223ENST00000545440 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
SNHG1-223ENST00000545440 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
SNHG1-223ENST00000545440 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
SNHG1-223ENST00000545440 CHKB-CPT1BH3BT56 60 aa3.15□□□□□ -1.91
SNHG1-223ENST00000545440 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
SNHG1-223ENST00000545440 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
SNHG1-223ENST00000545440 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
SNHG1-223ENST00000545440 KMT2DO14686 5537 aa3.14□□□□□ -1.91
SNHG1-223ENST00000545440 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-223ENST00000545440 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
SNHG1-223ENST00000545440 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
SNHG1-223ENST00000545440 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
SNHG1-223ENST00000545440 SPRR2EP22531 72 aa3.08□□□□□ -1.92
SNHG1-223ENST00000545440 SPRR2BP35325 72 aa3.08□□□□□ -1.92
SNHG1-223ENST00000545440 SPRR2AP35326 72 aa3.08□□□□□ -1.92
SNHG1-223ENST00000545440 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
SNHG1-223ENST00000545440 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
SNHG1-223ENST00000545440 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
SNHG1-223ENST00000545440 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
SNHG1-223ENST00000545440 COA5Q86WW8 74 aa3.03□□□□□ -1.92
SNHG1-223ENST00000545440 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
SNHG1-223ENST00000545440 COX7CP15954 63 aa3.01□□□□□ -1.93
SNHG1-223ENST00000545440 H7BZZ5 65 aa2.98□□□□□ -1.93
SNHG1-223ENST00000545440 SPRR2DP22532 72 aa2.98□□□□□ -1.93
SNHG1-223ENST00000545440 SERP1Q9Y6X1 66 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms