RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
ATP1A3-208ENST00000545399 K7ERS5 55 aa6.27□□□□□ -1.4
ATP1A3-208ENST00000545399 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
ATP1A3-208ENST00000545399 XP32Q5T750 250 aa6.26□□□□□ -1.41
ATP1A3-208ENST00000545399 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
ATP1A3-208ENST00000545399 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
ATP1A3-208ENST00000545399 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
ATP1A3-208ENST00000545399 S4R3F8 94 aa6.21□□□□□ -1.42
ATP1A3-208ENST00000545399 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
ATP1A3-208ENST00000545399 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
ATP1A3-208ENST00000545399 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
ATP1A3-208ENST00000545399 H0YAA0 97 aa6.16□□□□□ -1.42
ATP1A3-208ENST00000545399 LRP2P98164 4655 aa6.14□□□□□ -1.43
ATP1A3-208ENST00000545399 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
ATP1A3-208ENST00000545399 H3BS24 57 aa6.13□□□□□ -1.43
ATP1A3-208ENST00000545399 HSPG2P98160 4391 aa6.12□□□□□ -1.43
ATP1A3-208ENST00000545399 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
ATP1A3-208ENST00000545399 P0C880 135 aa6.09□□□□□ -1.43
ATP1A3-208ENST00000545399 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
ATP1A3-208ENST00000545399 LPAP08519 4548 aa6.08□□□□□ -1.44
ATP1A3-208ENST00000545399 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
ATP1A3-208ENST00000545399 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
ATP1A3-208ENST00000545399 M0QZ58 72 aa5.96□□□□□ -1.46
ATP1A3-208ENST00000545399 R4GN34 69 aa5.94□□□□□ -1.46
ATP1A3-208ENST00000545399 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
ATP1A3-208ENST00000545399 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
ATP1A3-208ENST00000545399 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
ATP1A3-208ENST00000545399 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
ATP1A3-208ENST00000545399 TNXBP22105 4242 aa5.92□□□□□ -1.46
ATP1A3-208ENST00000545399 MUC2Q02817 5179 aa5.91□□□□□ -1.46
ATP1A3-208ENST00000545399 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
ATP1A3-208ENST00000545399 HERC2O95714 4834 aa5.91□□□□□ -1.46
ATP1A3-208ENST00000545399 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.47
ATP1A3-208ENST00000545399 ROMO1P60602 79 aa5.9□□□□□ -1.47
ATP1A3-208ENST00000545399 M0R2T5 61 aa5.84□□□□□ -1.47
ATP1A3-208ENST00000545399 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
ATP1A3-208ENST00000545399 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
ATP1A3-208ENST00000545399 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
ATP1A3-208ENST00000545399 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
ATP1A3-208ENST00000545399 HERC1Q15751 4861 aa5.74□□□□□ -1.49
ATP1A3-208ENST00000545399 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
ATP1A3-208ENST00000545399 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
ATP1A3-208ENST00000545399 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
ATP1A3-208ENST00000545399 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
ATP1A3-208ENST00000545399 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
ATP1A3-208ENST00000545399 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
ATP1A3-208ENST00000545399 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
ATP1A3-208ENST00000545399 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
ATP1A3-208ENST00000545399 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
ATP1A3-208ENST00000545399 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
ATP1A3-208ENST00000545399 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
ATP1A3-208ENST00000545399 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
ATP1A3-208ENST00000545399 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
ATP1A3-208ENST00000545399 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
ATP1A3-208ENST00000545399 TNP1P09430 55 aa5.27□□□□□ -1.57
ATP1A3-208ENST00000545399 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
ATP1A3-208ENST00000545399 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
ATP1A3-208ENST00000545399 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
ATP1A3-208ENST00000545399 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
ATP1A3-208ENST00000545399 MT1HP80294 61 aa5.16□□□□□ -1.58
ATP1A3-208ENST00000545399 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
ATP1A3-208ENST00000545399 MT1FP04733 61 aa5.1□□□□□ -1.59
ATP1A3-208ENST00000545399 MT2AP02795 61 aa5.06□□□□□ -1.6
ATP1A3-208ENST00000545399 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
ATP1A3-208ENST00000545399 USH2AO75445 5202 aa5.06□□□□□ -1.6
ATP1A3-208ENST00000545399 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
ATP1A3-208ENST00000545399 LCE3AQ5TA76 89 aa4.96□□□□□ -1.61
ATP1A3-208ENST00000545399 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
ATP1A3-208ENST00000545399 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
ATP1A3-208ENST00000545399 KMT2DO14686 5537 aa4.87□□□□□ -1.63
ATP1A3-208ENST00000545399 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
ATP1A3-208ENST00000545399 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
ATP1A3-208ENST00000545399 MT1BP07438 61 aa4.78□□□□□ -1.64
ATP1A3-208ENST00000545399 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
ATP1A3-208ENST00000545399 MT1XP80297 61 aa4.73□□□□□ -1.65
ATP1A3-208ENST00000545399 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
ATP1A3-208ENST00000545399 KRTAP10-5P60370 271 aa4.71□□□□□ -1.65
ATP1A3-208ENST00000545399 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
ATP1A3-208ENST00000545399 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
ATP1A3-208ENST00000545399 LCE2BO14633 110 aa4.66□□□□□ -1.66
ATP1A3-208ENST00000545399 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
ATP1A3-208ENST00000545399 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.66
ATP1A3-208ENST00000545399 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
ATP1A3-208ENST00000545399 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
ATP1A3-208ENST00000545399 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
ATP1A3-208ENST00000545399 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
ATP1A3-208ENST00000545399 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
ATP1A3-208ENST00000545399 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
ATP1A3-208ENST00000545399 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
ATP1A3-208ENST00000545399 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
ATP1A3-208ENST00000545399 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
ATP1A3-208ENST00000545399 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.71
ATP1A3-208ENST00000545399 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
ATP1A3-208ENST00000545399 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
ATP1A3-208ENST00000545399 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
ATP1A3-208ENST00000545399 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
ATP1A3-208ENST00000545399 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
ATP1A3-208ENST00000545399 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
ATP1A3-208ENST00000545399 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
ATP1A3-208ENST00000545399 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms