RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 Q5VSD8 79 aa10.39□□□□□ -0.75
LYSMD4-210ENST00000545021 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
LYSMD4-210ENST00000545021 C20orf166-AS1Q96NR2 134 aa10.38□□□□□ -0.75
LYSMD4-210ENST00000545021 NDUFAF8A1L188 74 aa10.36□□□□□ -0.75
LYSMD4-210ENST00000545021 KRTAP15-1Q3LI76 137 aa10.36□□□□□ -0.75
LYSMD4-210ENST00000545021 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
LYSMD4-210ENST00000545021 TPRXLQ17RH7 258 aa10.35□□□□□ -0.75
LYSMD4-210ENST00000545021 PCLOQ9Y6V0 5065 aa10.33□□□□□ -0.76
LYSMD4-210ENST00000545021 ABCA13Q86UQ4 5058 aa10.33□□□□□ -0.76
LYSMD4-210ENST00000545021 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
LYSMD4-210ENST00000545021 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
LYSMD4-210ENST00000545021 RPL37P61927 97 aaKnown RBP10.28□□□□□ -0.76
LYSMD4-210ENST00000545021 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
LYSMD4-210ENST00000545021 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.78
LYSMD4-210ENST00000545021 FAT1Q14517 4588 aa10.15□□□□□ -0.78
LYSMD4-210ENST00000545021 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
LYSMD4-210ENST00000545021 A0A0A0MQY5 61 aa10.13□□□□□ -0.79
LYSMD4-210ENST00000545021 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
LYSMD4-210ENST00000545021 KRTAP13-4Q3LI77 160 aa10.06□□□□□ -0.8
LYSMD4-210ENST00000545021 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
LYSMD4-210ENST00000545021 A0A0D9SG42 100 aa10.03□□□□□ -0.8
LYSMD4-210ENST00000545021 J3QL48 77 aa9.99□□□□□ -0.81
LYSMD4-210ENST00000545021 MYCBP2O75592 4640 aa9.99□□□□□ -0.81
LYSMD4-210ENST00000545021 FAT3Q8TDW7 4589 aa9.96□□□□□ -0.81
LYSMD4-210ENST00000545021 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
LYSMD4-210ENST00000545021 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
LYSMD4-210ENST00000545021 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
LYSMD4-210ENST00000545021 S4R3F8 94 aa9.91□□□□□ -0.82
LYSMD4-210ENST00000545021 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
LYSMD4-210ENST00000545021 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
LYSMD4-210ENST00000545021 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
LYSMD4-210ENST00000545021 KRTAP12-2P59991 146 aa9.81□□□□□ -0.84
LYSMD4-210ENST00000545021 XP32Q5T750 250 aa9.8□□□□□ -0.84
LYSMD4-210ENST00000545021 LUZP6Q538Z0 58 aa9.75□□□□□ -0.85
LYSMD4-210ENST00000545021 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
LYSMD4-210ENST00000545021 HERC1Q15751 4861 aa9.72□□□□□ -0.85
LYSMD4-210ENST00000545021 TNXBP22105 4242 aa9.7□□□□□ -0.86
LYSMD4-210ENST00000545021 KRTAP12-1P59990 96 aa9.7□□□□□ -0.86
LYSMD4-210ENST00000545021 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
LYSMD4-210ENST00000545021 PLAC4Q8WY50 150 aa9.48□□□□□ -0.89
LYSMD4-210ENST00000545021 M0QZ58 72 aa9.45□□□□□ -0.9
LYSMD4-210ENST00000545021 UBR4Q5T4S7 5183 aa9.14□□□□□ -0.95
LYSMD4-210ENST00000545021 LRP2P98164 4655 aa9.13□□□□□ -0.95
LYSMD4-210ENST00000545021 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
LYSMD4-210ENST00000545021 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
LYSMD4-210ENST00000545021 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
LYSMD4-210ENST00000545021 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
LYSMD4-210ENST00000545021 LPAP08519 4548 aa9□□□□□ -0.97
LYSMD4-210ENST00000545021 R4GN34 69 aa8.99□□□□□ -0.97
LYSMD4-210ENST00000545021 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1.01
LYSMD4-210ENST00000545021 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
LYSMD4-210ENST00000545021 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
LYSMD4-210ENST00000545021 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
LYSMD4-210ENST00000545021 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
LYSMD4-210ENST00000545021 PRO2289Q9P1D8 64 aa8.63□□□□□ -1.03
LYSMD4-210ENST00000545021 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
LYSMD4-210ENST00000545021 KRTAP23-1A1A580 65 aa8.58□□□□□ -1.04
LYSMD4-210ENST00000545021 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
LYSMD4-210ENST00000545021 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
LYSMD4-210ENST00000545021 MUC2Q02817 5179 aa8.47□□□□□ -1.05
LYSMD4-210ENST00000545021 TNP1P09430 55 aa8.44□□□□□ -1.06
LYSMD4-210ENST00000545021 MT1HP80294 61 aa8.39□□□□□ -1.07
LYSMD4-210ENST00000545021 INE1O15225 51 aa8.38□□□□□ -1.07
LYSMD4-210ENST00000545021 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
LYSMD4-210ENST00000545021 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
LYSMD4-210ENST00000545021 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
LYSMD4-210ENST00000545021 M0R2T5 61 aa8.11□□□□□ -1.11
LYSMD4-210ENST00000545021 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
LYSMD4-210ENST00000545021 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
LYSMD4-210ENST00000545021 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
LYSMD4-210ENST00000545021 MT2AP02795 61 aa7.87□□□□□ -1.15
LYSMD4-210ENST00000545021 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
LYSMD4-210ENST00000545021 MT1FP04733 61 aa7.77□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
LYSMD4-210ENST00000545021 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
LYSMD4-210ENST00000545021 LCE2BO14633 110 aa7.61□□□□□ -1.19
LYSMD4-210ENST00000545021 USH2AO75445 5202 aa7.55□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
LYSMD4-210ENST00000545021 KRTAP19-6Q3LI70 58 aa7.46□□□□□ -1.22
LYSMD4-210ENST00000545021 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
LYSMD4-210ENST00000545021 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
LYSMD4-210ENST00000545021 FSIP2Q5CZC0 6907 aa7.33□□□□□ -1.24
LYSMD4-210ENST00000545021 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
LYSMD4-210ENST00000545021 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
LYSMD4-210ENST00000545021 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
LYSMD4-210ENST00000545021 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
LYSMD4-210ENST00000545021 MT1BP07438 61 aa7.2□□□□□ -1.26
LYSMD4-210ENST00000545021 MT1XP80297 61 aa7.17□□□□□ -1.26
LYSMD4-210ENST00000545021 LCE3CQ5T5A8 94 aa7.09□□□□□ -1.27
LYSMD4-210ENST00000545021 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
LYSMD4-210ENST00000545021 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.28
LYSMD4-210ENST00000545021 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
LYSMD4-210ENST00000545021 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms