RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 Q5VSD8 79 aa10.39□□□□□ -0.75
LYSMD4-210ENST00000545021 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
LYSMD4-210ENST00000545021 C20orf166-AS1Q96NR2 134 aa10.38□□□□□ -0.75
LYSMD4-210ENST00000545021 NDUFAF8A1L188 74 aa10.36□□□□□ -0.75
LYSMD4-210ENST00000545021 KRTAP15-1Q3LI76 137 aa10.36□□□□□ -0.75
LYSMD4-210ENST00000545021 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
LYSMD4-210ENST00000545021 TPRXLQ17RH7 258 aa10.35□□□□□ -0.75
LYSMD4-210ENST00000545021 PCLOQ9Y6V0 5065 aa10.33□□□□□ -0.76
LYSMD4-210ENST00000545021 ABCA13Q86UQ4 5058 aa10.33□□□□□ -0.76
LYSMD4-210ENST00000545021 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
LYSMD4-210ENST00000545021 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
LYSMD4-210ENST00000545021 RPL37P61927 97 aaKnown RBP10.28□□□□□ -0.76
LYSMD4-210ENST00000545021 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
LYSMD4-210ENST00000545021 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.78
LYSMD4-210ENST00000545021 FAT1Q14517 4588 aa10.15□□□□□ -0.78
LYSMD4-210ENST00000545021 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
LYSMD4-210ENST00000545021 A0A0A0MQY5 61 aa10.13□□□□□ -0.79
LYSMD4-210ENST00000545021 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
LYSMD4-210ENST00000545021 KRTAP13-4Q3LI77 160 aa10.06□□□□□ -0.8
LYSMD4-210ENST00000545021 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
LYSMD4-210ENST00000545021 A0A0D9SG42 100 aa10.03□□□□□ -0.8
LYSMD4-210ENST00000545021 J3QL48 77 aa9.99□□□□□ -0.81
LYSMD4-210ENST00000545021 MYCBP2O75592 4640 aa9.99□□□□□ -0.81
LYSMD4-210ENST00000545021 FAT3Q8TDW7 4589 aa9.96□□□□□ -0.81
LYSMD4-210ENST00000545021 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
LYSMD4-210ENST00000545021 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
LYSMD4-210ENST00000545021 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
LYSMD4-210ENST00000545021 S4R3F8 94 aa9.91□□□□□ -0.82
LYSMD4-210ENST00000545021 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
LYSMD4-210ENST00000545021 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
LYSMD4-210ENST00000545021 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
LYSMD4-210ENST00000545021 KRTAP12-2P59991 146 aa9.81□□□□□ -0.84
LYSMD4-210ENST00000545021 XP32Q5T750 250 aa9.8□□□□□ -0.84
LYSMD4-210ENST00000545021 LUZP6Q538Z0 58 aa9.75□□□□□ -0.85
LYSMD4-210ENST00000545021 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
LYSMD4-210ENST00000545021 HERC1Q15751 4861 aa9.72□□□□□ -0.85
LYSMD4-210ENST00000545021 TNXBP22105 4242 aa9.7□□□□□ -0.86
LYSMD4-210ENST00000545021 KRTAP12-1P59990 96 aa9.7□□□□□ -0.86
LYSMD4-210ENST00000545021 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
LYSMD4-210ENST00000545021 PLAC4Q8WY50 150 aa9.48□□□□□ -0.89
LYSMD4-210ENST00000545021 M0QZ58 72 aa9.45□□□□□ -0.9
LYSMD4-210ENST00000545021 UBR4Q5T4S7 5183 aa9.14□□□□□ -0.95
LYSMD4-210ENST00000545021 LRP2P98164 4655 aa9.13□□□□□ -0.95
LYSMD4-210ENST00000545021 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
LYSMD4-210ENST00000545021 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
LYSMD4-210ENST00000545021 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
LYSMD4-210ENST00000545021 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
LYSMD4-210ENST00000545021 LPAP08519 4548 aa9□□□□□ -0.97
LYSMD4-210ENST00000545021 R4GN34 69 aa8.99□□□□□ -0.97
LYSMD4-210ENST00000545021 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1.01
LYSMD4-210ENST00000545021 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
LYSMD4-210ENST00000545021 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
LYSMD4-210ENST00000545021 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
LYSMD4-210ENST00000545021 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
LYSMD4-210ENST00000545021 PRO2289Q9P1D8 64 aa8.63□□□□□ -1.03
LYSMD4-210ENST00000545021 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
LYSMD4-210ENST00000545021 KRTAP23-1A1A580 65 aa8.58□□□□□ -1.04
LYSMD4-210ENST00000545021 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
LYSMD4-210ENST00000545021 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
LYSMD4-210ENST00000545021 MUC2Q02817 5179 aa8.47□□□□□ -1.05
LYSMD4-210ENST00000545021 TNP1P09430 55 aa8.44□□□□□ -1.06
LYSMD4-210ENST00000545021 MT1HP80294 61 aa8.39□□□□□ -1.07
LYSMD4-210ENST00000545021 INE1O15225 51 aa8.38□□□□□ -1.07
LYSMD4-210ENST00000545021 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
LYSMD4-210ENST00000545021 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
LYSMD4-210ENST00000545021 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
LYSMD4-210ENST00000545021 M0R2T5 61 aa8.11□□□□□ -1.11
LYSMD4-210ENST00000545021 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
LYSMD4-210ENST00000545021 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
LYSMD4-210ENST00000545021 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
LYSMD4-210ENST00000545021 MT2AP02795 61 aa7.87□□□□□ -1.15
LYSMD4-210ENST00000545021 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
LYSMD4-210ENST00000545021 MT1FP04733 61 aa7.77□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
LYSMD4-210ENST00000545021 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
LYSMD4-210ENST00000545021 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
LYSMD4-210ENST00000545021 LCE2BO14633 110 aa7.61□□□□□ -1.19
LYSMD4-210ENST00000545021 USH2AO75445 5202 aa7.55□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
LYSMD4-210ENST00000545021 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
LYSMD4-210ENST00000545021 KRTAP19-6Q3LI70 58 aa7.46□□□□□ -1.22
LYSMD4-210ENST00000545021 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
LYSMD4-210ENST00000545021 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
LYSMD4-210ENST00000545021 FSIP2Q5CZC0 6907 aa7.33□□□□□ -1.24
LYSMD4-210ENST00000545021 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
LYSMD4-210ENST00000545021 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
LYSMD4-210ENST00000545021 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
LYSMD4-210ENST00000545021 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
LYSMD4-210ENST00000545021 MT1BP07438 61 aa7.2□□□□□ -1.26
LYSMD4-210ENST00000545021 MT1XP80297 61 aa7.17□□□□□ -1.26
LYSMD4-210ENST00000545021 LCE3CQ5T5A8 94 aa7.09□□□□□ -1.27
LYSMD4-210ENST00000545021 KRTAP6-3Q3LI67 103 aa7.04□□□□□ -1.28
LYSMD4-210ENST00000545021 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.28
LYSMD4-210ENST00000545021 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
LYSMD4-210ENST00000545021 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
LYSMD4-210ENST00000545021 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms