RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 Q5VV11 94 aa5.78□□□□□ -1.48
USP28-212ENST00000544750 LINC00643Q86TS7 51 aa5.77□□□□□ -1.49
USP28-212ENST00000544750 HIST1H4AP62805 103 aaKnown RBP5.76□□□□□ -1.49
USP28-212ENST00000544750 A0A087WVE0 104 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
USP28-212ENST00000544750 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
USP28-212ENST00000544750 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
USP28-212ENST00000544750 UQCRQO14949 82 aa5.7□□□□□ -1.5
USP28-212ENST00000544750 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
USP28-212ENST00000544750 S4R3F8 94 aa5.68□□□□□ -1.5
USP28-212ENST00000544750 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 H0Y9P7 68 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 LCA10Q71F78 164 aa5.67□□□□□ -1.5
USP28-212ENST00000544750 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
USP28-212ENST00000544750 J3QR89 54 aa5.64□□□□□ -1.51
USP28-212ENST00000544750 ATOX1O00244 68 aa5.64□□□□□ -1.51
USP28-212ENST00000544750 SPRR2EP22531 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2BP35325 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2AP35326 72 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
USP28-212ENST00000544750 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
USP28-212ENST00000544750 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
USP28-212ENST00000544750 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
USP28-212ENST00000544750 MP68P56378 58 aa5.53□□□□□ -1.52
USP28-212ENST00000544750 MT-ATP8P03928 68 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
USP28-212ENST00000544750 A8MUN3 132 aa5.5□□□□□ -1.53
USP28-212ENST00000544750 H3BPC8 53 aa5.49□□□□□ -1.53
USP28-212ENST00000544750 K7ERU9 68 aa5.49□□□□□ -1.53
USP28-212ENST00000544750 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
USP28-212ENST00000544750 NDUFC1O43677 76 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
USP28-212ENST00000544750 H0YAA0 97 aa5.43□□□□□ -1.54
USP28-212ENST00000544750 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
USP28-212ENST00000544750 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
USP28-212ENST00000544750 SPRR2DP22532 72 aa5.41□□□□□ -1.54
USP28-212ENST00000544750 MT1XP80297 61 aa5.41□□□□□ -1.54
USP28-212ENST00000544750 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
USP28-212ENST00000544750 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
USP28-212ENST00000544750 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
USP28-212ENST00000544750 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
USP28-212ENST00000544750 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
USP28-212ENST00000544750 P0C880 135 aa5.29□□□□□ -1.56
USP28-212ENST00000544750 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
USP28-212ENST00000544750 SNURFQ9Y675 71 aa5.28□□□□□ -1.56
USP28-212ENST00000544750 ACYP2P14621 99 aa5.26□□□□□ -1.57
USP28-212ENST00000544750 SERP2Q8N6R1 65 aa5.24□□□□□ -1.57
USP28-212ENST00000544750 C20orf197Q8N268 126 aa5.22□□□□□ -1.57
USP28-212ENST00000544750 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
USP28-212ENST00000544750 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
USP28-212ENST00000544750 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
USP28-212ENST00000544750 R4GN34 69 aa5.19□□□□□ -1.58
USP28-212ENST00000544750 M0QZ58 72 aa5.17□□□□□ -1.58
USP28-212ENST00000544750 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
USP28-212ENST00000544750 SPTSSBQ8NFR3 76 aa5.14□□□□□ -1.59
USP28-212ENST00000544750 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
USP28-212ENST00000544750 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
USP28-212ENST00000544750 COX7CP15954 63 aa5.11□□□□□ -1.59
USP28-212ENST00000544750 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
USP28-212ENST00000544750 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
USP28-212ENST00000544750 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
USP28-212ENST00000544750 H3BS24 57 aa5.07□□□□□ -1.6
USP28-212ENST00000544750 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
USP28-212ENST00000544750 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
USP28-212ENST00000544750 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
USP28-212ENST00000544750 COA5Q86WW8 74 aa5.05□□□□□ -1.6
USP28-212ENST00000544750 H7BZZ5 65 aa5.04□□□□□ -1.6
USP28-212ENST00000544750 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
USP28-212ENST00000544750 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
USP28-212ENST00000544750 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
USP28-212ENST00000544750 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
USP28-212ENST00000544750 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
USP28-212ENST00000544750 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
USP28-212ENST00000544750 SEC61GP60059 68 aa4.84□□□□□ -1.63
USP28-212ENST00000544750 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
USP28-212ENST00000544750 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
USP28-212ENST00000544750 MT1EP04732 61 aa4.81□□□□□ -1.64
USP28-212ENST00000544750 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
USP28-212ENST00000544750 A0A1B0GU33 70 aa4.8□□□□□ -1.64
USP28-212ENST00000544750 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
USP28-212ENST00000544750 A0A0D9SG42 100 aa4.79□□□□□ -1.64
USP28-212ENST00000544750 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
USP28-212ENST00000544750 MT4P47944 62 aa4.77□□□□□ -1.65
USP28-212ENST00000544750 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
USP28-212ENST00000544750 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
USP28-212ENST00000544750 A0A1B0GU69 56 aa4.75□□□□□ -1.65
USP28-212ENST00000544750 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 287.3 ms