RNA–Protein interactions for RNA: ENST00000544440.6

MYCBP2-211, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYCBP2, Length 14,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-211ENST00000544440 XP32Q5T750 250 aa2.09□□□□□ -2.07
MYCBP2-211ENST00000544440 KRTAP3-3Q9BYR6 98 aa2.09□□□□□ -2.07
MYCBP2-211ENST00000544440 KRTAP3-2Q9BYR7 98 aa2.09□□□□□ -2.07
MYCBP2-211ENST00000544440 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
MYCBP2-211ENST00000544440 RYR2Q92736 4967 aa2.08□□□□□ -2.08
MYCBP2-211ENST00000544440 LORP23490 312 aaPredicted RBP2.07□□□□□ -2.08
MYCBP2-211ENST00000544440 DNAH3Q8TD57 4116 aa2.07□□□□□ -2.08
MYCBP2-211ENST00000544440 RYR1P21817 5038 aa2.07□□□□□ -2.08
MYCBP2-211ENST00000544440 MT1HL1P0DM35 61 aa2.06□□□□□ -2.08
MYCBP2-211ENST00000544440 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
MYCBP2-211ENST00000544440 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
MYCBP2-211ENST00000544440 CSMD3Q7Z407 3707 aa2.06□□□□□ -2.08
MYCBP2-211ENST00000544440 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
MYCBP2-211ENST00000544440 KRTAP17-1Q9BYP8 105 aa2.05□□□□□ -2.08
MYCBP2-211ENST00000544440 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.08
MYCBP2-211ENST00000544440 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.08
MYCBP2-211ENST00000544440 TPRXLQ17RH7 258 aa2.03□□□□□ -2.08
MYCBP2-211ENST00000544440 HYDINQ4G0P3 5121 aa2.03□□□□□ -2.09
MYCBP2-211ENST00000544440 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
MYCBP2-211ENST00000544440 TNP1P09430 55 aa2.02□□□□□ -2.09
MYCBP2-211ENST00000544440 INE1O15225 51 aa2.02□□□□□ -2.09
MYCBP2-211ENST00000544440 C10orf95Q9H7T3 257 aa2.02□□□□□ -2.09
MYCBP2-211ENST00000544440 MYCBP2O75592 4640 aa2□□□□□ -2.09
MYCBP2-211ENST00000544440 ANK2Q01484 3957 aa2□□□□□ -2.09
MYCBP2-211ENST00000544440 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
MYCBP2-211ENST00000544440 RYR3Q15413 4870 aa1.99□□□□□ -2.09
MYCBP2-211ENST00000544440 KRTAP12-2P59991 146 aa1.99□□□□□ -2.09
MYCBP2-211ENST00000544440 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
MYCBP2-211ENST00000544440 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
MYCBP2-211ENST00000544440 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
MYCBP2-211ENST00000544440 FAT3Q8TDW7 4589 aa1.95□□□□□ -2.1
MYCBP2-211ENST00000544440 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
MYCBP2-211ENST00000544440 KRTAP4-5Q9BYR2 181 aa1.94□□□□□ -2.1
MYCBP2-211ENST00000544440 DNAH7Q8WXX0 4024 aa1.92□□□□□ -2.1
MYCBP2-211ENST00000544440 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
MYCBP2-211ENST00000544440 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
MYCBP2-211ENST00000544440 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
MYCBP2-211ENST00000544440 PKD1P98161 4303 aa1.91□□□□□ -2.1
MYCBP2-211ENST00000544440 LYSTQ99698 3801 aa1.91□□□□□ -2.1
MYCBP2-211ENST00000544440 CMYA5Q8N3K9 4069 aa1.9□□□□□ -2.11
MYCBP2-211ENST00000544440 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
MYCBP2-211ENST00000544440 KMT2AQ03164 3969 aa1.89□□□□□ -2.11
MYCBP2-211ENST00000544440 LRP2P98164 4655 aa1.88□□□□□ -2.11
MYCBP2-211ENST00000544440 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
MYCBP2-211ENST00000544440 HERC2O95714 4834 aa1.88□□□□□ -2.11
MYCBP2-211ENST00000544440 HECTD4Q9Y4D8 3996 aa1.88□□□□□ -2.11
MYCBP2-211ENST00000544440 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
MYCBP2-211ENST00000544440 BIRC6Q9NR09 4857 aa1.85□□□□□ -2.11
MYCBP2-211ENST00000544440 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
MYCBP2-211ENST00000544440 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
MYCBP2-211ENST00000544440 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
MYCBP2-211ENST00000544440 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
MYCBP2-211ENST00000544440 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
MYCBP2-211ENST00000544440 HERC1Q15751 4861 aa1.79□□□□□ -2.12
MYCBP2-211ENST00000544440 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
MYCBP2-211ENST00000544440 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
MYCBP2-211ENST00000544440 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
MYCBP2-211ENST00000544440 HSPG2P98160 4391 aa1.78□□□□□ -2.12
MYCBP2-211ENST00000544440 PCLOQ9Y6V0 5065 aa1.78□□□□□ -2.13
MYCBP2-211ENST00000544440 LCE2CQ5TA81 110 aa1.76□□□□□ -2.13
MYCBP2-211ENST00000544440 PKHD1L1Q86WI1 4243 aa1.75□□□□□ -2.13
MYCBP2-211ENST00000544440 KRTAP19-1Q8IUB9 90 aa1.75□□□□□ -2.13
MYCBP2-211ENST00000544440 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
MYCBP2-211ENST00000544440 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
MYCBP2-211ENST00000544440 SPRR2EP22531 72 aa1.73□□□□□ -2.13
MYCBP2-211ENST00000544440 SPRR2BP35325 72 aa1.73□□□□□ -2.13
MYCBP2-211ENST00000544440 SPRR2AP35326 72 aa1.73□□□□□ -2.13
MYCBP2-211ENST00000544440 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
MYCBP2-211ENST00000544440 MT2AP02795 61 aa1.72□□□□□ -2.13
MYCBP2-211ENST00000544440 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
MYCBP2-211ENST00000544440 MUC2Q02817 5179 aa1.71□□□□□ -2.14
MYCBP2-211ENST00000544440 MT1FP04733 61 aa1.71□□□□□ -2.14
MYCBP2-211ENST00000544440 LPAP08519 4548 aa1.68□□□□□ -2.14
MYCBP2-211ENST00000544440 MT1HP80294 61 aa1.68□□□□□ -2.14
MYCBP2-211ENST00000544440 TNXBP22105 4242 aa1.68□□□□□ -2.14
MYCBP2-211ENST00000544440 SPRR2DP22532 72 aa1.67□□□□□ -2.14
MYCBP2-211ENST00000544440 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
MYCBP2-211ENST00000544440 LCE3AQ5TA76 89 aa1.66□□□□□ -2.14
MYCBP2-211ENST00000544440 KRTAP10-5P60370 271 aa1.66□□□□□ -2.14
MYCBP2-211ENST00000544440 MT1BP07438 61 aa1.65□□□□□ -2.14
MYCBP2-211ENST00000544440 KRTAP9-8Q9BYQ0 159 aa1.65□□□□□ -2.15
MYCBP2-211ENST00000544440 KRTAP10-12P60413 245 aa1.65□□□□□ -2.15
MYCBP2-211ENST00000544440 MT1XP80297 61 aa1.62□□□□□ -2.15
MYCBP2-211ENST00000544440 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
MYCBP2-211ENST00000544440 KRTAP19-4Q3LI73 84 aa1.61□□□□□ -2.15
MYCBP2-211ENST00000544440 KRTAP9-6A0A140TA67 174 aa1.6□□□□□ -2.15
MYCBP2-211ENST00000544440 KRTAP9-3Q9BYQ3 159 aa1.6□□□□□ -2.15
MYCBP2-211ENST00000544440 USH2AO75445 5202 aa1.59□□□□□ -2.15
MYCBP2-211ENST00000544440 MT4P47944 62 aa1.56□□□□□ -2.16
MYCBP2-211ENST00000544440 LCE2BO14633 110 aa1.56□□□□□ -2.16
MYCBP2-211ENST00000544440 KRTAP9-2Q9BYQ4 174 aa1.56□□□□□ -2.16
MYCBP2-211ENST00000544440 LCE2DQ5TA82 110 aaPredicted RBP1.55□□□□□ -2.16
MYCBP2-211ENST00000544440 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
MYCBP2-211ENST00000544440 FLGP20930 4061 aaPredicted RBP1.54□□□□□ -2.16
MYCBP2-211ENST00000544440 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
MYCBP2-211ENST00000544440 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
MYCBP2-211ENST00000544440 MT3P25713 68 aa1.51□□□□□ -2.17
MYCBP2-211ENST00000544440 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
MYCBP2-211ENST00000544440 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
MYCBP2-211ENST00000544440 LCE2AQ5TA79 106 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms