RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 PCP4L1A6NKN8 68 aa3.29□□□□□ -1.88
NUP43-206ENST00000543637 ACYP1P07311 99 aa3.29□□□□□ -1.88
NUP43-206ENST00000543637 LCA10Q71F78 164 aa3.29□□□□□ -1.88
NUP43-206ENST00000543637 KRTAP3-1Q9BYR8 98 aa3.28□□□□□ -1.88
NUP43-206ENST00000543637 TRAV22A0A0B4J277 110 aa3.27□□□□□ -1.89
NUP43-206ENST00000543637 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
NUP43-206ENST00000543637 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
NUP43-206ENST00000543637 LOC101927531A0A1B0GV80 90 aa3.26□□□□□ -1.89
NUP43-206ENST00000543637 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
NUP43-206ENST00000543637 Q5VV11 94 aa3.26□□□□□ -1.89
NUP43-206ENST00000543637 A6NN06 94 aa3.24□□□□□ -1.89
NUP43-206ENST00000543637 UQCRQO14949 82 aa3.24□□□□□ -1.89
NUP43-206ENST00000543637 KLKP1Q107X0 134 aa3.24□□□□□ -1.89
NUP43-206ENST00000543637 ATOX1O00244 68 aa3.23□□□□□ -1.89
NUP43-206ENST00000543637 NDUFC1O43677 76 aa3.23□□□□□ -1.89
NUP43-206ENST00000543637 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
NUP43-206ENST00000543637 ATP5EP2Q5VTU8 51 aa3.23□□□□□ -1.89
NUP43-206ENST00000543637 IMUPQ9GZP8 106 aa3.23□□□□□ -1.89
NUP43-206ENST00000543637 H0Y9P7 68 aa3.22□□□□□ -1.89
NUP43-206ENST00000543637 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
NUP43-206ENST00000543637 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
NUP43-206ENST00000543637 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
NUP43-206ENST00000543637 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
NUP43-206ENST00000543637 A8MUN3 132 aa3.18□□□□□ -1.9
NUP43-206ENST00000543637 MT1BP07438 61 aa3.18□□□□□ -1.9
NUP43-206ENST00000543637 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
NUP43-206ENST00000543637 A0A087WVE0 104 aa3.17□□□□□ -1.9
NUP43-206ENST00000543637 MP68P56378 58 aa3.17□□□□□ -1.9
NUP43-206ENST00000543637 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
NUP43-206ENST00000543637 H0YAA0 97 aa3.15□□□□□ -1.91
NUP43-206ENST00000543637 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
NUP43-206ENST00000543637 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
NUP43-206ENST00000543637 J3QR89 54 aa3.12□□□□□ -1.91
NUP43-206ENST00000543637 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
NUP43-206ENST00000543637 H3BPC8 53 aa3.11□□□□□ -1.91
NUP43-206ENST00000543637 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
NUP43-206ENST00000543637 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
NUP43-206ENST00000543637 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
NUP43-206ENST00000543637 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
NUP43-206ENST00000543637 R4GN34 69 aa3.09□□□□□ -1.91
NUP43-206ENST00000543637 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
NUP43-206ENST00000543637 A0A1B0GV90 55 aa3.07□□□□□ -1.92
NUP43-206ENST00000543637 M0QZ58 72 aa3.04□□□□□ -1.92
NUP43-206ENST00000543637 ACYP2P14621 99 aa3.04□□□□□ -1.92
NUP43-206ENST00000543637 SPTSSBQ8NFR3 76 aa3.04□□□□□ -1.92
NUP43-206ENST00000543637 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
NUP43-206ENST00000543637 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
NUP43-206ENST00000543637 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
NUP43-206ENST00000543637 TRAV7A0A075B6U4 112 aa3.01□□□□□ -1.93
NUP43-206ENST00000543637 P0C880 135 aa3.01□□□□□ -1.93
NUP43-206ENST00000543637 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
NUP43-206ENST00000543637 SMIM20Q8N5G0 67 aa3.01□□□□□ -1.93
NUP43-206ENST00000543637 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
NUP43-206ENST00000543637 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
NUP43-206ENST00000543637 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
NUP43-206ENST00000543637 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
NUP43-206ENST00000543637 MT1XP80297 61 aa2.97□□□□□ -1.93
NUP43-206ENST00000543637 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
NUP43-206ENST00000543637 K7ERU9 68 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 SPRR2EP22531 72 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 SPRR2BP35325 72 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 SPRR2AP35326 72 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
NUP43-206ENST00000543637 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
NUP43-206ENST00000543637 SNURFQ9Y675 71 aa2.9□□□□□ -1.95
NUP43-206ENST00000543637 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
NUP43-206ENST00000543637 KRTAP15-1Q3LI76 137 aa2.89□□□□□ -1.95
NUP43-206ENST00000543637 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
NUP43-206ENST00000543637 SPRR2DP22532 72 aa2.86□□□□□ -1.95
NUP43-206ENST00000543637 SEC61GP60059 68 aa2.86□□□□□ -1.95
NUP43-206ENST00000543637 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
NUP43-206ENST00000543637 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
NUP43-206ENST00000543637 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
NUP43-206ENST00000543637 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
NUP43-206ENST00000543637 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
NUP43-206ENST00000543637 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
NUP43-206ENST00000543637 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
NUP43-206ENST00000543637 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
NUP43-206ENST00000543637 KMT2DO14686 5537 aa2.82□□□□□ -1.96
NUP43-206ENST00000543637 NEBP20929 6669 aa2.8□□□□□ -1.96
NUP43-206ENST00000543637 COA5Q86WW8 74 aa2.79□□□□□ -1.96
NUP43-206ENST00000543637 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
NUP43-206ENST00000543637 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
NUP43-206ENST00000543637 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
NUP43-206ENST00000543637 A0A0D9SG42 100 aa2.76□□□□□ -1.97
NUP43-206ENST00000543637 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
NUP43-206ENST00000543637 A0A1B0GU33 70 aa2.75□□□□□ -1.97
NUP43-206ENST00000543637 COX7CP15954 63 aa2.75□□□□□ -1.97
NUP43-206ENST00000543637 SVIPQ8NHG7 77 aa2.74□□□□□ -1.97
NUP43-206ENST00000543637 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
NUP43-206ENST00000543637 SMIM26A0A096LP01 95 aa2.7□□□□□ -1.98
NUP43-206ENST00000543637 A0A1B0GU69 56 aa2.7□□□□□ -1.98
NUP43-206ENST00000543637 H7BZZ5 65 aa2.68□□□□□ -1.98
NUP43-206ENST00000543637 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
NUP43-206ENST00000543637 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
NUP43-206ENST00000543637 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
NUP43-206ENST00000543637 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
NUP43-206ENST00000543637 MT1EP04732 61 aa2.64□□□□□ -1.99
NUP43-206ENST00000543637 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms