RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 MXRA5Q9NR99 2828 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 M0R2T5 61 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 DEFB135Q30KP9 77 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 APCP25054 2843 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 EP400Q96L91 3159 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 DNAH11Q96DT5 4516 aa0.85□□□□□ -2.27
GTF2H3-213ENST00000543415 RIF1Q5UIP0 2472 aaKnown RBP0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 UNC80Q8N2C7 3258 aa0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 ASPMQ8IZT6 3477 aa0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 DSPP15924 2871 aaKnown RBP0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 AKAP9Q99996 3911 aa0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 RELNP78509 3460 aa0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
GTF2H3-213ENST00000543415 ACACAQ13085 2346 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 CELSR1Q9NYQ6 3014 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 VPS13DQ5THJ4 4388 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 SPTA1P02549 2419 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 ZZEF1O43149 2961 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 CRYBG3Q68DQ2 2970 aa0.84□□□□□ -2.28
GTF2H3-213ENST00000543415 FRYLO94915 3013 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 NBPF19A0A087WUL8 3843 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 MTORP42345 2549 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 FAM186AA6NE01 2351 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 RNF213Q63HN8 5207 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 MYCBP2O75592 4640 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 FAT4Q6V0I7 4981 aa0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 DMBT1Q9UGM3 2413 aaPredicted RBP0.83□□□□□ -2.28
GTF2H3-213ENST00000543415 MAP1AP78559 2803 aaPredicted RBP0.82□□□□□ -2.28
GTF2H3-213ENST00000543415 DEFB136Q30KP8 78 aa0.82□□□□□ -2.28
GTF2H3-213ENST00000543415 DEFB133Q30KQ1 61 aa0.82□□□□□ -2.28
GTF2H3-213ENST00000543415 DEFB124Q8NES8 71 aa0.82□□□□□ -2.28
GTF2H3-213ENST00000543415 TRIOO75962 3097 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 PRUNE2Q8WUY3 3088 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 DMDP11532 3685 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 H3BNG1 76 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 ACANP16112 2415 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 ZNF469Q96JG9 3925 aaPredicted RBP0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 ANK2Q01484 3957 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 DCHS1Q96JQ0 3298 aa0.81□□□□□ -2.28
GTF2H3-213ENST00000543415 HTTP42858 3142 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 M0QZ58 72 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 LINC01556Q5JQF7 62 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 USP34Q70CQ2 3546 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 CEP290O15078 2479 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 PRRC2CQ9Y520 2896 aaKnown RBP0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 COL12A1Q99715 3063 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 CSPG4Q6UVK1 2322 aa0.8□□□□□ -2.28
GTF2H3-213ENST00000543415 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 XIRP2A4UGR9 3374 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 LRBAP50851 2863 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 CSMD3Q7Z407 3707 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 MDN1Q9NU22 5596 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 DNAH8Q96JB1 4490 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 MUC3AQ02505 3323 aa0.79□□□□□ -2.28
GTF2H3-213ENST00000543415 A0A096LPF7 62 aa0.78□□□□□ -2.28
GTF2H3-213ENST00000543415 SRRM2Q9UQ35 2752 aaKnown RBP0.78□□□□□ -2.29
GTF2H3-213ENST00000543415 BRCA2P51587 3418 aa0.77□□□□□ -2.29
GTF2H3-213ENST00000543415 A0A096LNI7 61 aa0.77□□□□□ -2.29
GTF2H3-213ENST00000543415 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH1Q9P2D7 4330 aa0.77□□□□□ -2.29
GTF2H3-213ENST00000543415 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
GTF2H3-213ENST00000543415 TRRAPQ9Y4A5 3859 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 SPENQ96T58 3664 aaKnown RBP0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 LAMA3Q16787 3333 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 FRYQ5TBA9 3013 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 NF1P21359 2839 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 NIPBLQ6KC79 2804 aaeCLIP0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 TGP01266 2768 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 FREM2Q5SZK8 3169 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 SACSQ9NZJ4 4579 aa0.76□□□□□ -2.29
GTF2H3-213ENST00000543415 ITPR2Q14571 2701 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 APC2O95996 2303 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 SPART-AS1P0CW21 52 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 DMXL2Q8TDJ6 3036 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 LAMA5O15230 3695 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
GTF2H3-213ENST00000543415 HIVEP1P15822 2718 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 SMG1Q96Q15 3661 aaKnown RBP0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 ATMQ13315 3056 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 WDFY3Q8IZQ1 3526 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH2Q9P225 4427 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 HUWE1Q7Z6Z7 4374 aaKnown RBP0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 RPS29P62273 56 aaKnown RBP0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 HERC2O95714 4834 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH10Q8IVF4 4471 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 DMXL1Q9Y485 3027 aa0.74□□□□□ -2.29
GTF2H3-213ENST00000543415 ANK3Q12955 4377 aaKnown RBP0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 HMCN2Q8NDA2 5059 aa0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 LOC400499M0QZD8 3231 aa0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 LAMA1P25391 3075 aa0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 CMYA5Q8N3K9 4069 aa0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
GTF2H3-213ENST00000543415 APOBP04114 4563 aaKnown RBP0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 PRKDCP78527 4128 aaKnown RBP0.72□□□□□ -2.29
GTF2H3-213ENST00000543415 DNAH3Q8TD57 4116 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms