RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 AKAP9Q99996 3911 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
MRPL48-212ENST00000543374 USP9YO00507 2555 aaPredicted RBP0.29□□□□□ -2.36
MRPL48-212ENST00000543374 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
MRPL48-212ENST00000543374 WDR87Q6ZQQ6 2873 aa0.28□□□□□ -2.36
MRPL48-212ENST00000543374 DYNC2H1Q8NCM8 4307 aaKnown RBP0.28□□□□□ -2.37
MRPL48-212ENST00000543374 NBEAL1Q6ZS30 2694 aa0.28□□□□□ -2.37
MRPL48-212ENST00000543374 SPENQ96T58 3664 aaKnown RBP0.27□□□□□ -2.37
MRPL48-212ENST00000543374 APOBP04114 4563 aaKnown RBP0.27□□□□□ -2.37
MRPL48-212ENST00000543374 MYO18BQ8IUG5 2567 aa0.27□□□□□ -2.37
MRPL48-212ENST00000543374 MXRA5Q9NR99 2828 aa0.27□□□□□ -2.37
MRPL48-212ENST00000543374 LRP2P98164 4655 aa0.27□□□□□ -2.37
MRPL48-212ENST00000543374 FRYQ5TBA9 3013 aa0.27□□□□□ -2.37
MRPL48-212ENST00000543374 ITPR1Q14643 2758 aa0.26□□□□□ -2.37
MRPL48-212ENST00000543374 LINC01590Q5TEZ4 76 aa0.26□□□□□ -2.37
MRPL48-212ENST00000543374 MGAM2Q2M2H8 2515 aa0.26□□□□□ -2.37
MRPL48-212ENST00000543374 TLN2Q9Y4G6 2542 aa0.25□□□□□ -2.37
MRPL48-212ENST00000543374 SVEP1Q4LDE5 3571 aa0.25□□□□□ -2.37
MRPL48-212ENST00000543374 DNAH6Q9C0G6 4158 aa0.25□□□□□ -2.37
MRPL48-212ENST00000543374 LAMA5O15230 3695 aa0.25□□□□□ -2.37
MRPL48-212ENST00000543374 CRYBG3Q68DQ2 2970 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 LEAP2Q969E1 77 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 ARHGAP5-AS1Q96IT6 56 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 CHD7Q9P2D1 2997 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 ITPR3Q14573 2671 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 USP9XQ93008 2570 aaPredicted RBP0.24□□□□□ -2.37
MRPL48-212ENST00000543374 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 NBPF19A0A087WUL8 3843 aa0.24□□□□□ -2.37
MRPL48-212ENST00000543374 CCDC168Q8NDH2 2452 aa0.23□□□□□ -2.37
MRPL48-212ENST00000543374 CELSR3Q9NYQ7 3312 aa0.23□□□□□ -2.37
MRPL48-212ENST00000543374 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
MRPL48-212ENST00000543374 TRIOO75962 3097 aa0.22□□□□□ -2.37
MRPL48-212ENST00000543374 VPS13DQ5THJ4 4388 aa0.21□□□□□ -2.38
MRPL48-212ENST00000543374 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
MRPL48-212ENST00000543374 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
MRPL48-212ENST00000543374 DNAH1Q9P2D7 4330 aa0.2□□□□□ -2.38
MRPL48-212ENST00000543374 MACF1Q9UPN3 7388 aaKnown RBP0.2□□□□□ -2.38
MRPL48-212ENST00000543374 LAMA1P25391 3075 aa0.19□□□□□ -2.38
MRPL48-212ENST00000543374 SMR3BP02814 79 aaPredicted RBP0.19□□□□□ -2.38
MRPL48-212ENST00000543374 SPTBN5Q9NRC6 3674 aaKnown RBP0.18□□□□□ -2.38
MRPL48-212ENST00000543374 DNAH8Q96JB1 4490 aa0.18□□□□□ -2.38
MRPL48-212ENST00000543374 DEFB1P60022 68 aa0.16□□□□□ -2.38
MRPL48-212ENST00000543374 PRCDQ00LT1 54 aa0.16□□□□□ -2.38
MRPL48-212ENST00000543374 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
MRPL48-212ENST00000543374 ZFHX4Q86UP3 3567 aa0.15□□□□□ -2.39
MRPL48-212ENST00000543374 FAT1Q14517 4588 aa0.14□□□□□ -2.39
MRPL48-212ENST00000543374 K7EIM0 57 aa0.12□□□□□ -2.39
MRPL48-212ENST00000543374 DNAH10Q8IVF4 4471 aa0.11□□□□□ -2.39
MRPL48-212ENST00000543374 SPTAN1Q13813 2472 aaKnown RBP0.11□□□□□ -2.39
MRPL48-212ENST00000543374 CSMD1Q96PZ7 3565 aa0.11□□□□□ -2.39
MRPL48-212ENST00000543374 MT1HP80294 61 aa0.1□□□□□ -2.39
MRPL48-212ENST00000543374 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
MRPL48-212ENST00000543374 MGAQ8IWI9 3026 aa0.1□□□□□ -2.39
MRPL48-212ENST00000543374 HERC1Q15751 4861 aa0.1□□□□□ -2.39
MRPL48-212ENST00000543374 LAMA3Q16787 3333 aa0.09□□□□□ -2.39
MRPL48-212ENST00000543374 RELNP78509 3460 aa0.09□□□□□ -2.39
MRPL48-212ENST00000543374 RHPN1-AS1Q9BWJ2 59 aa0.09□□□□□ -2.4
MRPL48-212ENST00000543374 C5orf42Q9H799 3197 aa0.09□□□□□ -2.4
MRPL48-212ENST00000543374 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
MRPL48-212ENST00000543374 ADGRG4Q8IZF6 3080 aa0.08□□□□□ -2.4
MRPL48-212ENST00000543374 DMXL2Q8TDJ6 3036 aa0.08□□□□□ -2.4
MRPL48-212ENST00000543374 DEFB136Q30KP8 78 aa0.08□□□□□ -2.4
MRPL48-212ENST00000543374 PCLOQ9Y6V0 5065 aa0.07□□□□□ -2.4
MRPL48-212ENST00000543374 PLECQ15149 4684 aaKnown RBP0.07□□□□□ -2.4
MRPL48-212ENST00000543374 TEX15Q9BXT5 2789 aa0.05□□□□□ -2.4
MRPL48-212ENST00000543374 DEFB104AQ8WTQ1 72 aa0.05□□□□□ -2.4
MRPL48-212ENST00000543374 TTTY10Q9BZA0 68 aa0.05□□□□□ -2.4
MRPL48-212ENST00000543374 MUC17Q685J3 4493 aa0.04□□□□□ -2.4
MRPL48-212ENST00000543374 MT1EP04732 61 aa0.04□□□□□ -2.4
MRPL48-212ENST00000543374 CEP250Q9BV73 2442 aa0.04□□□□□ -2.4
MRPL48-212ENST00000543374 MUC2Q02817 5179 aa0.03□□□□□ -2.4
MRPL48-212ENST00000543374 CFAP54Q96N23 3096 aa0.03□□□□□ -2.4
MRPL48-212ENST00000543374 NIPBLQ6KC79 2804 aaeCLIP0.03□□□□□ -2.4
MRPL48-212ENST00000543374 H3BUX3 64 aa0.03□□□□□ -2.4
MRPL48-212ENST00000543374 LRBAP50851 2863 aa0.03□□□□□ -2.41
MRPL48-212ENST00000543374 KMT2CQ8NEZ4 4911 aaKnown RBP0.02□□□□□ -2.41
MRPL48-212ENST00000543374 DYNC1H1Q14204 4646 aaKnown RBP0.02□□□□□ -2.41
MRPL48-212ENST00000543374 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
MRPL48-212ENST00000543374 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
MRPL48-212ENST00000543374 TMEM167AQ8TBQ9 72 aa0.01□□□□□ -2.41
MRPL48-212ENST00000543374 TRRAPQ9Y4A5 3859 aa0.01□□□□□ -2.41
MRPL48-212ENST00000543374 CFAP46Q8IYW2 2715 aa0.01□□□□□ -2.41
MRPL48-212ENST00000543374 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
MRPL48-212ENST00000543374 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
MRPL48-212ENST00000543374 DNAH17Q9UFH2 4485 aa0□□□□□ -2.41
MRPL48-212ENST00000543374 STARD9Q9P2P6 4700 aa-0.01□□□□□ -2.41
MRPL48-212ENST00000543374 MT1LQ93083 61 aa-0.02□□□□□ -2.41
MRPL48-212ENST00000543374 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
MRPL48-212ENST00000543374 SMG1Q96Q15 3661 aaKnown RBP-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 H3BSH0 61 aa-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 KRTAP19-8Q3LI54 63 aa-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 DEFB124Q8NES8 71 aa-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 UBR4Q5T4S7 5183 aa-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
MRPL48-212ENST00000543374 ATMQ13315 3056 aa-0.05□□□□□ -2.42
MRPL48-212ENST00000543374 MT1XP80297 61 aa-0.06□□□□□ -2.42
MRPL48-212ENST00000543374 ITPR2Q14571 2701 aa-0.06□□□□□ -2.42
MRPL48-212ENST00000543374 USH2AO75445 5202 aa-0.07□□□□□ -2.42
MRPL48-212ENST00000543374 DNAH5Q8TE73 4624 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 1011.9 ms