RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 AEBP2Q6ZN18 517 aaPredicted RBP31.53■■■□□ 2.64
MRPL48-212ENST00000543374 CHIC1Q5VXU3 224 aa30.21■■■□□ 2.43
MRPL48-212ENST00000543374 SENP3Q9H4L4 574 aaPredicted RBP27.07■■□□□ 1.92
MRPL48-212ENST00000543374 PHF23Q9BUL5 403 aaPredicted RBP26.67■■□□□ 1.86
MRPL48-212ENST00000543374 FOXD1Q16676 465 aa25.08■■□□□ 1.61
MRPL48-212ENST00000543374 PLPPR3Q6T4P5 718 aa24.29■■□□□ 1.48
MRPL48-212ENST00000543374 MSH5O43196 834 aa23.58■■□□□ 1.37
MRPL48-212ENST00000543374 PIAS4Q8N2W9 510 aaPredicted RBP23.53■■□□□ 1.36
MRPL48-212ENST00000543374 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
MRPL48-212ENST00000543374 ADRA2BP18089 450 aa23.47■■□□□ 1.35
MRPL48-212ENST00000543374 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
MRPL48-212ENST00000543374 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
MRPL48-212ENST00000543374 MAPK8IP2Q13387 824 aaPredicted RBP21.48■■□□□ 1.03
MRPL48-212ENST00000543374 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
MRPL48-212ENST00000543374 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
MRPL48-212ENST00000543374 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
MRPL48-212ENST00000543374 HOXD11P31277 338 aaPredicted RBP20.72■□□□□ 0.91
MRPL48-212ENST00000543374 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
MRPL48-212ENST00000543374 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
MRPL48-212ENST00000543374 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
MRPL48-212ENST00000543374 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
MRPL48-212ENST00000543374 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
MRPL48-212ENST00000543374 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
MRPL48-212ENST00000543374 RNF39Q9H2S5 420 aa20.05■□□□□ 0.8
MRPL48-212ENST00000543374 C1QBPQ07021 282 aaKnown RBP19.86■□□□□ 0.77
MRPL48-212ENST00000543374 KCNA4P22459 653 aa19.85■□□□□ 0.77
MRPL48-212ENST00000543374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
MRPL48-212ENST00000543374 U3KPZ7 1027 aaPredicted RBP19.28■□□□□ 0.68
MRPL48-212ENST00000543374 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
MRPL48-212ENST00000543374 APLP2Q06481 763 aa19.02■□□□□ 0.64
MRPL48-212ENST00000543374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
MRPL48-212ENST00000543374 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
MRPL48-212ENST00000543374 CAPN15O75808 1086 aa18.98■□□□□ 0.63
MRPL48-212ENST00000543374 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
MRPL48-212ENST00000543374 SAMD1Q6SPF0 538 aaPredicted RBP18.85■□□□□ 0.61
MRPL48-212ENST00000543374 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
MRPL48-212ENST00000543374 DSG3P32926 999 aa18.81■□□□□ 0.6
MRPL48-212ENST00000543374 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.6
MRPL48-212ENST00000543374 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
MRPL48-212ENST00000543374 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
MRPL48-212ENST00000543374 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
MRPL48-212ENST00000543374 ABCB7O75027 752 aa18.47■□□□□ 0.55
MRPL48-212ENST00000543374 POLA2Q14181 598 aa18.25■□□□□ 0.51
MRPL48-212ENST00000543374 ZBTB22O15209 634 aa18.18■□□□□ 0.5
MRPL48-212ENST00000543374 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
MRPL48-212ENST00000543374 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.48
MRPL48-212ENST00000543374 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
MRPL48-212ENST00000543374 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
MRPL48-212ENST00000543374 POTEHQ6S545 545 aa17.8■□□□□ 0.44
MRPL48-212ENST00000543374 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
MRPL48-212ENST00000543374 FBLN2P98095 1184 aa17.6■□□□□ 0.41
MRPL48-212ENST00000543374 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
MRPL48-212ENST00000543374 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
MRPL48-212ENST00000543374 CHRDL2Q6WN34 429 aa17.52■□□□□ 0.4
MRPL48-212ENST00000543374 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
MRPL48-212ENST00000543374 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
MRPL48-212ENST00000543374 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
MRPL48-212ENST00000543374 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
MRPL48-212ENST00000543374 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
MRPL48-212ENST00000543374 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
MRPL48-212ENST00000543374 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
MRPL48-212ENST00000543374 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
MRPL48-212ENST00000543374 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
MRPL48-212ENST00000543374 PIP4P2Q8N4L2 257 aa17.1■□□□□ 0.33
MRPL48-212ENST00000543374 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
MRPL48-212ENST00000543374 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
MRPL48-212ENST00000543374 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
MRPL48-212ENST00000543374 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
MRPL48-212ENST00000543374 HAX1O00165 279 aa16.81■□□□□ 0.28
MRPL48-212ENST00000543374 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
MRPL48-212ENST00000543374 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
MRPL48-212ENST00000543374 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
MRPL48-212ENST00000543374 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
MRPL48-212ENST00000543374 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
MRPL48-212ENST00000543374 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
MRPL48-212ENST00000543374 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
MRPL48-212ENST00000543374 EVX2Q03828 476 aa16.45■□□□□ 0.22
MRPL48-212ENST00000543374 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
MRPL48-212ENST00000543374 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
MRPL48-212ENST00000543374 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
MRPL48-212ENST00000543374 PROM2Q8N271 834 aa16.26■□□□□ 0.19
MRPL48-212ENST00000543374 CLCN6P51797 869 aa16.24■□□□□ 0.19
MRPL48-212ENST00000543374 GABBR2O75899 941 aa16.2■□□□□ 0.18
MRPL48-212ENST00000543374 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
MRPL48-212ENST00000543374 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
MRPL48-212ENST00000543374 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
MRPL48-212ENST00000543374 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
MRPL48-212ENST00000543374 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
MRPL48-212ENST00000543374 MNX1P50219 401 aaPredicted RBP16.02■□□□□ 0.16
MRPL48-212ENST00000543374 FKBP8Q14318 412 aa15.94■□□□□ 0.14
MRPL48-212ENST00000543374 MIER1Q8N108 512 aa15.93■□□□□ 0.14
MRPL48-212ENST00000543374 DCBLD2Q96PD2 775 aa15.89■□□□□ 0.13
MRPL48-212ENST00000543374 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
MRPL48-212ENST00000543374 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
MRPL48-212ENST00000543374 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
MRPL48-212ENST00000543374 PHF12Q96QT6 1004 aa15.77■□□□□ 0.12
MRPL48-212ENST00000543374 GALR2O43603 387 aaPredicted RBP15.75■□□□□ 0.11
MRPL48-212ENST00000543374 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
MRPL48-212ENST00000543374 LHX8Q68G74 356 aa15.73■□□□□ 0.11
MRPL48-212ENST00000543374 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms