RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 PKD1P98161 4303 aa2.87□□□□□ -1.95
KDM3B-209ENST00000542866 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
KDM3B-209ENST00000542866 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
KDM3B-209ENST00000542866 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
KDM3B-209ENST00000542866 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
KDM3B-209ENST00000542866 DNAH5Q8TE73 4624 aa2.84□□□□□ -1.95
KDM3B-209ENST00000542866 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.96
KDM3B-209ENST00000542866 PKHD1P08F94 4074 aa2.84□□□□□ -1.96
KDM3B-209ENST00000542866 A0A0D9SG42 100 aa2.82□□□□□ -1.96
KDM3B-209ENST00000542866 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
KDM3B-209ENST00000542866 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
KDM3B-209ENST00000542866 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
KDM3B-209ENST00000542866 KRTAP15-1Q3LI76 137 aa2.81□□□□□ -1.96
KDM3B-209ENST00000542866 HERC2O95714 4834 aa2.81□□□□□ -1.96
KDM3B-209ENST00000542866 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
KDM3B-209ENST00000542866 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
KDM3B-209ENST00000542866 VPS13BQ7Z7G8 4022 aa2.8□□□□□ -1.96
KDM3B-209ENST00000542866 RPL37P61927 97 aaKnown RBP2.79□□□□□ -1.96
KDM3B-209ENST00000542866 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
KDM3B-209ENST00000542866 KRTAP10-4P60372 401 aaPredicted RBP2.78□□□□□ -1.96
KDM3B-209ENST00000542866 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
KDM3B-209ENST00000542866 KRTAP4-5Q9BYR2 181 aa2.78□□□□□ -1.97
KDM3B-209ENST00000542866 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
KDM3B-209ENST00000542866 KIAA1109Q2LD37 5005 aa2.76□□□□□ -1.97
KDM3B-209ENST00000542866 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
KDM3B-209ENST00000542866 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
KDM3B-209ENST00000542866 FAT1Q14517 4588 aa2.75□□□□□ -1.97
KDM3B-209ENST00000542866 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
KDM3B-209ENST00000542866 LCE2AQ5TA79 106 aaPredicted RBP2.74□□□□□ -1.97
KDM3B-209ENST00000542866 HSPG2P98160 4391 aa2.74□□□□□ -1.97
KDM3B-209ENST00000542866 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
KDM3B-209ENST00000542866 APOBP04114 4563 aaKnown RBP2.72□□□□□ -1.97
KDM3B-209ENST00000542866 MT1HL1P0DM35 61 aa2.72□□□□□ -1.97
KDM3B-209ENST00000542866 RYR1P21817 5038 aa2.72□□□□□ -1.97
KDM3B-209ENST00000542866 S4R3F8 94 aa2.71□□□□□ -1.98
KDM3B-209ENST00000542866 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
KDM3B-209ENST00000542866 FAT3Q8TDW7 4589 aa2.69□□□□□ -1.98
KDM3B-209ENST00000542866 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
KDM3B-209ENST00000542866 LORP23490 312 aaPredicted RBP2.68□□□□□ -1.98
KDM3B-209ENST00000542866 XP32Q5T750 250 aa2.66□□□□□ -1.98
KDM3B-209ENST00000542866 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
KDM3B-209ENST00000542866 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
KDM3B-209ENST00000542866 M0R2T5 61 aa2.61□□□□□ -1.99
KDM3B-209ENST00000542866 LRP1Q07954 4544 aaKnown RBP2.6□□□□□ -1.99
KDM3B-209ENST00000542866 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
KDM3B-209ENST00000542866 TNXBP22105 4242 aa2.6□□□□□ -1.99
KDM3B-209ENST00000542866 M0QZ58 72 aa2.59□□□□□ -2
KDM3B-209ENST00000542866 R4GN34 69 aa2.55□□□□□ -2
KDM3B-209ENST00000542866 HERC1Q15751 4861 aa2.54□□□□□ -2
KDM3B-209ENST00000542866 PLAC4Q8WY50 150 aa2.53□□□□□ -2
KDM3B-209ENST00000542866 HMCN2Q8NDA2 5059 aa2.51□□□□□ -2.01
KDM3B-209ENST00000542866 LPAP08519 4548 aa2.51□□□□□ -2.01
KDM3B-209ENST00000542866 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
KDM3B-209ENST00000542866 LRP2P98164 4655 aa2.48□□□□□ -2.01
KDM3B-209ENST00000542866 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
KDM3B-209ENST00000542866 KRTAP9-2Q9BYQ4 174 aa2.44□□□□□ -2.02
KDM3B-209ENST00000542866 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
KDM3B-209ENST00000542866 UBR4Q5T4S7 5183 aa2.42□□□□□ -2.02
KDM3B-209ENST00000542866 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
KDM3B-209ENST00000542866 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
KDM3B-209ENST00000542866 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
KDM3B-209ENST00000542866 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
KDM3B-209ENST00000542866 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
KDM3B-209ENST00000542866 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
KDM3B-209ENST00000542866 TNP1P09430 55 aa2.35□□□□□ -2.03
KDM3B-209ENST00000542866 MT1HP80294 61 aa2.31□□□□□ -2.04
KDM3B-209ENST00000542866 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
KDM3B-209ENST00000542866 MUC2Q02817 5179 aa2.29□□□□□ -2.04
KDM3B-209ENST00000542866 LOC100996750A0A140TA64 210 aa2.29□□□□□ -2.04
KDM3B-209ENST00000542866 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
KDM3B-209ENST00000542866 INE1O15225 51 aa2.28□□□□□ -2.04
KDM3B-209ENST00000542866 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
KDM3B-209ENST00000542866 KRTAP19-2Q3LHN2 52 aa2.27□□□□□ -2.05
KDM3B-209ENST00000542866 KRTAP9-7A8MTY7 169 aa2.25□□□□□ -2.05
KDM3B-209ENST00000542866 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
KDM3B-209ENST00000542866 MT2AP02795 61 aa2.22□□□□□ -2.05
KDM3B-209ENST00000542866 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
KDM3B-209ENST00000542866 MT1FP04733 61 aa2.19□□□□□ -2.06
KDM3B-209ENST00000542866 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
KDM3B-209ENST00000542866 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.06
KDM3B-209ENST00000542866 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
KDM3B-209ENST00000542866 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
KDM3B-209ENST00000542866 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
KDM3B-209ENST00000542866 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
KDM3B-209ENST00000542866 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
KDM3B-209ENST00000542866 KRTAP9-3Q9BYQ3 159 aa2.09□□□□□ -2.07
KDM3B-209ENST00000542866 KRTAP12-3P60328 96 aa2.09□□□□□ -2.08
KDM3B-209ENST00000542866 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP10-12P60413 245 aa2.06□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP10-5P60370 271 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 LCE3BQ5TA77 95 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 USH2AO75445 5202 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 MT1XP80297 61 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP9-9Q9BYP9 154 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 KRTAP9-4Q9BYQ2 154 aa2.04□□□□□ -2.08
KDM3B-209ENST00000542866 MT1BP07438 61 aa2.03□□□□□ -2.09
KDM3B-209ENST00000542866 KRTAP10-7P60409 375 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms