RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
LTBR-210ENST00000542830 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
LTBR-210ENST00000542830 MT1BP07438 61 aa7.82□□□□□ -1.16
LTBR-210ENST00000542830 A0A087WVE0 104 aa7.81□□□□□ -1.16
LTBR-210ENST00000542830 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
LTBR-210ENST00000542830 A6NN06 94 aa7.78□□□□□ -1.16
LTBR-210ENST00000542830 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
LTBR-210ENST00000542830 A8MUN3 132 aa7.77□□□□□ -1.17
LTBR-210ENST00000542830 NDUFC1O43677 76 aa7.77□□□□□ -1.17
LTBR-210ENST00000542830 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
LTBR-210ENST00000542830 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
LTBR-210ENST00000542830 MP68P56378 58 aa7.73□□□□□ -1.17
LTBR-210ENST00000542830 A0A1B0GV90 55 aa7.72□□□□□ -1.17
LTBR-210ENST00000542830 H0YAA0 97 aa7.72□□□□□ -1.17
LTBR-210ENST00000542830 OCR1Q9BZK8 76 aa7.71□□□□□ -1.18
LTBR-210ENST00000542830 J3QR89 54 aa7.67□□□□□ -1.18
LTBR-210ENST00000542830 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
LTBR-210ENST00000542830 H3BPC8 53 aa7.62□□□□□ -1.19
LTBR-210ENST00000542830 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
LTBR-210ENST00000542830 SCGB1A1P11684 91 aa7.57□□□□□ -1.2
LTBR-210ENST00000542830 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
LTBR-210ENST00000542830 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
LTBR-210ENST00000542830 R4GN34 69 aa7.44□□□□□ -1.22
LTBR-210ENST00000542830 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
LTBR-210ENST00000542830 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
LTBR-210ENST00000542830 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
LTBR-210ENST00000542830 P0C880 135 aa7.4□□□□□ -1.22
LTBR-210ENST00000542830 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
LTBR-210ENST00000542830 NEBP20929 6669 aa7.39□□□□□ -1.23
LTBR-210ENST00000542830 TRAV7A0A075B6U4 112 aa7.37□□□□□ -1.23
LTBR-210ENST00000542830 SMIM20Q8N5G0 67 aa7.37□□□□□ -1.23
LTBR-210ENST00000542830 M0QZ58 72 aa7.36□□□□□ -1.23
LTBR-210ENST00000542830 K7ERU9 68 aa7.34□□□□□ -1.23
LTBR-210ENST00000542830 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
LTBR-210ENST00000542830 ACYP2P14621 99 aa7.34□□□□□ -1.23
LTBR-210ENST00000542830 MT1XP80297 61 aa7.33□□□□□ -1.24
LTBR-210ENST00000542830 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
LTBR-210ENST00000542830 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
LTBR-210ENST00000542830 KMT2DO14686 5537 aa7.27□□□□□ -1.25
LTBR-210ENST00000542830 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
LTBR-210ENST00000542830 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
LTBR-210ENST00000542830 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
LTBR-210ENST00000542830 KRTAP20-1Q3LI63 56 aa7.19□□□□□ -1.26
LTBR-210ENST00000542830 MDN1Q9NU22 5596 aa7.19□□□□□ -1.26
LTBR-210ENST00000542830 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
LTBR-210ENST00000542830 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
LTBR-210ENST00000542830 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
LTBR-210ENST00000542830 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
LTBR-210ENST00000542830 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
LTBR-210ENST00000542830 SPRR2EP22531 72 aa7.06□□□□□ -1.28
LTBR-210ENST00000542830 SPRR2BP35325 72 aa7.06□□□□□ -1.28
LTBR-210ENST00000542830 SPRR2AP35326 72 aa7.06□□□□□ -1.28
LTBR-210ENST00000542830 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
LTBR-210ENST00000542830 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
LTBR-210ENST00000542830 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
LTBR-210ENST00000542830 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
LTBR-210ENST00000542830 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
LTBR-210ENST00000542830 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
LTBR-210ENST00000542830 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
LTBR-210ENST00000542830 COA5Q86WW8 74 aa6.9□□□□□ -1.3
LTBR-210ENST00000542830 KRTAP13-4Q3LI77 160 aa6.89□□□□□ -1.31
LTBR-210ENST00000542830 SEC61GP60059 68 aa6.85□□□□□ -1.31
LTBR-210ENST00000542830 COX7CP15954 63 aa6.84□□□□□ -1.31
LTBR-210ENST00000542830 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
LTBR-210ENST00000542830 SPRR2DP22532 72 aa6.83□□□□□ -1.32
LTBR-210ENST00000542830 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
LTBR-210ENST00000542830 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
LTBR-210ENST00000542830 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
LTBR-210ENST00000542830 H7BZZ5 65 aa6.74□□□□□ -1.33
LTBR-210ENST00000542830 A0A0D9SG42 100 aa6.7□□□□□ -1.34
LTBR-210ENST00000542830 A0A1B0GU33 70 aa6.7□□□□□ -1.34
LTBR-210ENST00000542830 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
LTBR-210ENST00000542830 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
LTBR-210ENST00000542830 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
LTBR-210ENST00000542830 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
LTBR-210ENST00000542830 A0A1B0GU69 56 aa6.57□□□□□ -1.36
LTBR-210ENST00000542830 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
LTBR-210ENST00000542830 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
LTBR-210ENST00000542830 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
LTBR-210ENST00000542830 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
LTBR-210ENST00000542830 MT1EP04732 61 aa6.5□□□□□ -1.37
LTBR-210ENST00000542830 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
LTBR-210ENST00000542830 KRTAP19-3Q7Z4W3 81 aa6.47□□□□□ -1.37
LTBR-210ENST00000542830 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
LTBR-210ENST00000542830 A8MU10 97 aa6.41□□□□□ -1.38
LTBR-210ENST00000542830 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
LTBR-210ENST00000542830 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
LTBR-210ENST00000542830 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
LTBR-210ENST00000542830 MT1GP13640 62 aa6.32□□□□□ -1.4
LTBR-210ENST00000542830 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
LTBR-210ENST00000542830 TNP1P09430 55 aa6.31□□□□□ -1.4
LTBR-210ENST00000542830 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
LTBR-210ENST00000542830 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
LTBR-210ENST00000542830 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
LTBR-210ENST00000542830 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
LTBR-210ENST00000542830 TMEM258P61165 79 aa6.22□□□□□ -1.41
LTBR-210ENST00000542830 MT1LQ93083 61 aa6.21□□□□□ -1.42
LTBR-210ENST00000542830 MT1MQ8N339 61 aa6.19□□□□□ -1.42
LTBR-210ENST00000542830 UQCR11O14957 56 aa6.16□□□□□ -1.42
LTBR-210ENST00000542830 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms