RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
CACNA2D4-215ENST00000542340 A8MUN3 132 aa9.16□□□□□ -0.94
CACNA2D4-215ENST00000542340 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D4-215ENST00000542340 SCGB1A1P11684 91 aa9.14□□□□□ -0.95
CACNA2D4-215ENST00000542340 H3BPC8 53 aa9.13□□□□□ -0.95
CACNA2D4-215ENST00000542340 K7ERU9 68 aa9.1□□□□□ -0.95
CACNA2D4-215ENST00000542340 NDUFC1O43677 76 aa9.1□□□□□ -0.95
CACNA2D4-215ENST00000542340 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
CACNA2D4-215ENST00000542340 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
CACNA2D4-215ENST00000542340 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
CACNA2D4-215ENST00000542340 H0YAA0 97 aa9□□□□□ -0.97
CACNA2D4-215ENST00000542340 CRIPTQ9P021 101 aa9□□□□□ -0.97
CACNA2D4-215ENST00000542340 KRTAP19-8Q3LI54 63 aa8.99□□□□□ -0.97
CACNA2D4-215ENST00000542340 KRTAP9-7A8MTY7 169 aa8.98□□□□□ -0.97
CACNA2D4-215ENST00000542340 Q5VV11 94 aa8.97□□□□□ -0.97
CACNA2D4-215ENST00000542340 MT1BP07438 61 aa8.95□□□□□ -0.98
CACNA2D4-215ENST00000542340 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
CACNA2D4-215ENST00000542340 DMAC1Q96GE9 116 aa8.93□□□□□ -0.98
CACNA2D4-215ENST00000542340 TRAV7A0A075B6U4 112 aa8.92□□□□□ -0.98
CACNA2D4-215ENST00000542340 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
CACNA2D4-215ENST00000542340 MACF1Q9UPN3 7388 aaKnown RBP8.87□□□□□ -0.99
CACNA2D4-215ENST00000542340 A6NN06 94 aa8.8□□□□□ -1
CACNA2D4-215ENST00000542340 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
CACNA2D4-215ENST00000542340 ACYP2P14621 99 aa8.75□□□□□ -1.01
CACNA2D4-215ENST00000542340 KRTAP10-5P60370 271 aa8.73□□□□□ -1.01
CACNA2D4-215ENST00000542340 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
CACNA2D4-215ENST00000542340 P0C880 135 aa8.69□□□□□ -1.02
CACNA2D4-215ENST00000542340 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
CACNA2D4-215ENST00000542340 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
CACNA2D4-215ENST00000542340 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
CACNA2D4-215ENST00000542340 R4GN34 69 aa8.65□□□□□ -1.02
CACNA2D4-215ENST00000542340 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
CACNA2D4-215ENST00000542340 KRTAP6-3Q3LI67 103 aa8.62□□□□□ -1.03
CACNA2D4-215ENST00000542340 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
CACNA2D4-215ENST00000542340 M0QZ58 72 aa8.58□□□□□ -1.04
CACNA2D4-215ENST00000542340 CHKB-CPT1BH3BT56 60 aa8.57□□□□□ -1.04
CACNA2D4-215ENST00000542340 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
CACNA2D4-215ENST00000542340 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
CACNA2D4-215ENST00000542340 COX7CP15954 63 aa8.43□□□□□ -1.06
CACNA2D4-215ENST00000542340 MT1XP80297 61 aa8.43□□□□□ -1.06
CACNA2D4-215ENST00000542340 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
CACNA2D4-215ENST00000542340 COA5Q86WW8 74 aa8.33□□□□□ -1.08
CACNA2D4-215ENST00000542340 KRTAP5-9P26371 169 aa8.29□□□□□ -1.08
CACNA2D4-215ENST00000542340 H7BZZ5 65 aa8.27□□□□□ -1.09
CACNA2D4-215ENST00000542340 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
CACNA2D4-215ENST00000542340 NEBP20929 6669 aa8.23□□□□□ -1.09
CACNA2D4-215ENST00000542340 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
CACNA2D4-215ENST00000542340 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CACNA2D4-215ENST00000542340 ANAPC13Q9BS18 74 aa8.19□□□□□ -1.1
CACNA2D4-215ENST00000542340 KMT2DO14686 5537 aa8.18□□□□□ -1.1
CACNA2D4-215ENST00000542340 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
CACNA2D4-215ENST00000542340 SEC61GP60059 68 aa8.15□□□□□ -1.1
CACNA2D4-215ENST00000542340 SERP1Q9Y6X1 66 aa8.14□□□□□ -1.11
CACNA2D4-215ENST00000542340 KRTAP8-1Q8IUC2 63 aa8.09□□□□□ -1.11
CACNA2D4-215ENST00000542340 MDN1Q9NU22 5596 aa8.07□□□□□ -1.12
CACNA2D4-215ENST00000542340 SPRR2FQ96RM1 72 aa8.06□□□□□ -1.12
CACNA2D4-215ENST00000542340 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
CACNA2D4-215ENST00000542340 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
CACNA2D4-215ENST00000542340 KRTAP4-8A0A0G2JLE6 195 aa8.01□□□□□ -1.13
CACNA2D4-215ENST00000542340 CCDC179H3BU77 68 aa8.01□□□□□ -1.13
CACNA2D4-215ENST00000542340 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
CACNA2D4-215ENST00000542340 A0A1B0GU33 70 aa8□□□□□ -1.13
CACNA2D4-215ENST00000542340 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
CACNA2D4-215ENST00000542340 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
CACNA2D4-215ENST00000542340 A0A0D9SG42 100 aa7.92□□□□□ -1.14
CACNA2D4-215ENST00000542340 A0A1B0GU69 56 aa7.91□□□□□ -1.14
CACNA2D4-215ENST00000542340 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
CACNA2D4-215ENST00000542340 SPRR2EP22531 72 aa7.9□□□□□ -1.14
CACNA2D4-215ENST00000542340 SPRR2BP35325 72 aa7.9□□□□□ -1.14
CACNA2D4-215ENST00000542340 SPRR2AP35326 72 aa7.9□□□□□ -1.14
CACNA2D4-215ENST00000542340 KRTAP20-1Q3LI63 56 aa7.89□□□□□ -1.15
CACNA2D4-215ENST00000542340 LCE1AQ5T7P2 110 aa7.83□□□□□ -1.16
CACNA2D4-215ENST00000542340 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
CACNA2D4-215ENST00000542340 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
CACNA2D4-215ENST00000542340 SMIM26A0A096LP01 95 aa7.77□□□□□ -1.17
CACNA2D4-215ENST00000542340 KRTAP2-3P0C7H8 128 aa7.75□□□□□ -1.17
CACNA2D4-215ENST00000542340 KRTAP2-4Q9BYR9 128 aa7.75□□□□□ -1.17
CACNA2D4-215ENST00000542340 TMEM258P61165 79 aa7.74□□□□□ -1.17
CACNA2D4-215ENST00000542340 PRR15LQ9BU68 103 aa7.72□□□□□ -1.17
CACNA2D4-215ENST00000542340 A8MU10 97 aa7.68□□□□□ -1.18
CACNA2D4-215ENST00000542340 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
CACNA2D4-215ENST00000542340 SPRR2DP22532 72 aa7.64□□□□□ -1.19
CACNA2D4-215ENST00000542340 KRTAP19-7Q3SYF9 63 aa7.54□□□□□ -1.2
CACNA2D4-215ENST00000542340 KRTAP2-2Q9BYT5 123 aa7.52□□□□□ -1.21
CACNA2D4-215ENST00000542340 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
CACNA2D4-215ENST00000542340 UQCR11O14957 56 aa7.47□□□□□ -1.21
CACNA2D4-215ENST00000542340 MT1EP04732 61 aa7.46□□□□□ -1.22
CACNA2D4-215ENST00000542340 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
CACNA2D4-215ENST00000542340 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
CACNA2D4-215ENST00000542340 TNP1P09430 55 aa7.4□□□□□ -1.22
CACNA2D4-215ENST00000542340 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
CACNA2D4-215ENST00000542340 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
CACNA2D4-215ENST00000542340 KRTAP19-3Q7Z4W3 81 aa7.38□□□□□ -1.23
CACNA2D4-215ENST00000542340 V9GYY9 64 aa7.32□□□□□ -1.24
CACNA2D4-215ENST00000542340 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
CACNA2D4-215ENST00000542340 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CACNA2D4-215ENST00000542340 Q1T7F1 81 aa7.27□□□□□ -1.25
CACNA2D4-215ENST00000542340 MT1GP13640 62 aa7.24□□□□□ -1.25
CACNA2D4-215ENST00000542340 PSPHP1O15172 72 aa7.23□□□□□ -1.25
CACNA2D4-215ENST00000542340 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms