RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 NBEAL2Q6ZNJ1 2754 aa1.27□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 NSD1Q96L73 2696 aaPredicted RBP1.27□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 HIVEP1P15822 2718 aa1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 CELSR3Q9NYQ7 3312 aa1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 SMG1Q96Q15 3661 aaKnown RBP1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TGP01266 2768 aa1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 MYO18BQ8IUG5 2567 aa1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 KALRNO60229 2985 aa1.26□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 PKD1L1Q8TDX9 2849 aa1.25□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 MXRA5Q9NR99 2828 aa1.25□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 CFAP47Q6ZTR5 3102 aa1.25□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 FREM2Q5SZK8 3169 aa1.24□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 ZFYVE26Q68DK2 2539 aa1.24□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 GOLGB1Q14789 3259 aaKnown RBP1.24□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TEP1Q99973 2627 aaKnown RBP1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 UNC79Q9P2D8 2635 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TLN1Q9Y490 2541 aaKnown RBP1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TLN2Q9Y4G6 2542 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TNXBP22105 4242 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 PKHD1L1Q86WI1 4243 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 DOPEY1Q5JWR5 2465 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 HTN3P15516 51 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 SMR3AQ99954 134 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 WDFY4Q6ZS81 3184 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 STAB1Q9NY15 2570 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 DCHS1Q96JQ0 3298 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 ACACBO00763 2458 aa1.23□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 LAMA5O15230 3695 aa1.22□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 DNAH2Q9P225 4427 aa1.22□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 FRAS1Q86XX4 4008 aa1.22□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 SPTBN5Q9NRC6 3674 aaKnown RBP1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 HRNRQ86YZ3 2850 aaPredicted RBP1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 NBEAL1Q6ZS30 2694 aa1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 ANK3Q12955 4377 aaKnown RBP1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 TEX15Q9BXT5 2789 aa1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 CSMD1Q96PZ7 3565 aa1.21□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 LAMA1P25391 3075 aa1.2□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 SPTAN1Q13813 2472 aaKnown RBP1.19□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 HECTD4Q9Y4D8 3996 aa1.19□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 LAMA3Q16787 3333 aa1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 UTRNP46939 3433 aa1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 SPEGQ15772 3267 aa1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 FBN3Q75N90 2809 aa1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 MUC3AQ02505 3323 aa1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 DNAH10Q8IVF4 4471 aa1.17□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 CMYA5Q8N3K9 4069 aa1.17□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 DNAH1Q9P2D7 4330 aa1.17□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 XIRP2A4UGR9 3374 aa1.17□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 TENM3Q9P273 2699 aa1.17□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 FLNBO75369 2602 aaKnown RBP1.16□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 CEP295Q9C0D2 2601 aa1.16□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 U3KQA8 63 aa1.16□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 DNAH6Q9C0G6 4158 aa1.16□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 PKD1P98161 4303 aa1.16□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 EP400Q96L91 3159 aa1.15□□□□□ -2.22
CACNA1C-IT2-201ENST00000541871 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 HSPG2P98160 4391 aa1.15□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 CUBNO60494 3623 aa1.15□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 PRM1P04553 51 aa1.14□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 TRRAPQ9Y4A5 3859 aa1.14□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 FAT3Q8TDW7 4589 aa1.13□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 DEFB4AO15263 64 aa1.13□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 USP34Q70CQ2 3546 aa1.13□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 HUWE1Q7Z6Z7 4374 aaKnown RBP1.13□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 LOC400499M0QZD8 3231 aa1.12□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 MGAM2Q2M2H8 2515 aa1.12□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 STAB2Q8WWQ8 2551 aa1.12□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 DNAH9Q9NYC9 4486 aa1.11□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 ADGRG4Q8IZF6 3080 aa1.11□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 SVEP1Q4LDE5 3571 aa1.11□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 PKHD1P08F94 4074 aa1.1□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 LAMA2P24043 3122 aaKnown RBP1.1□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 ASPMQ8IZT6 3477 aa1.09□□□□□ -2.23
CACNA1C-IT2-201ENST00000541871 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 CSMD2Q7Z408 3487 aa1.08□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 CENPFP49454 3210 aa1.07□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 SMR3BP02814 79 aaPredicted RBP1.07□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 MAST4O15021 2626 aa1.07□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 DNAH17Q9UFH2 4485 aa1.07□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 DNAH5Q8TE73 4624 aa1.06□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 VPS13CQ709C8 3753 aa1.04□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 LRP1Q07954 4544 aaKnown RBP1.04□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 TENM1Q9UKZ4 2725 aa1.03□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 MYO9AB2RTY4 2548 aa1.03□□□□□ -2.24
CACNA1C-IT2-201ENST00000541871 MYO15AQ9UKN7 3530 aa1.02□□□□□ -2.25
CACNA1C-IT2-201ENST00000541871 PCNTO95613 3336 aa1.02□□□□□ -2.25
CACNA1C-IT2-201ENST00000541871 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
CACNA1C-IT2-201ENST00000541871 LPAP08519 4548 aa1.01□□□□□ -2.25
CACNA1C-IT2-201ENST00000541871 VCANP13611 3396 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms