RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
CHFR-220ENST00000541817 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
CHFR-220ENST00000541817 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
CHFR-220ENST00000541817 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
CHFR-220ENST00000541817 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
CHFR-220ENST00000541817 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
CHFR-220ENST00000541817 NEBP20929 6669 aa5.16□□□□□ -1.58
CHFR-220ENST00000541817 MT2AP02795 61 aa5.12□□□□□ -1.59
CHFR-220ENST00000541817 LIMD2Q9BT23 127 aa5.12□□□□□ -1.59
CHFR-220ENST00000541817 LOC101927531A0A1B0GV80 90 aa5.11□□□□□ -1.59
CHFR-220ENST00000541817 Q1T7F1 81 aa5.11□□□□□ -1.59
CHFR-220ENST00000541817 LINC00313P59037 77 aa5.1□□□□□ -1.59
CHFR-220ENST00000541817 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
CHFR-220ENST00000541817 MT1FP04733 61 aa5.09□□□□□ -1.59
CHFR-220ENST00000541817 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
CHFR-220ENST00000541817 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
CHFR-220ENST00000541817 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
CHFR-220ENST00000541817 COA5Q86WW8 74 aa5.06□□□□□ -1.6
CHFR-220ENST00000541817 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
CHFR-220ENST00000541817 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
CHFR-220ENST00000541817 Q5W150 140 aa5.02□□□□□ -1.61
CHFR-220ENST00000541817 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
CHFR-220ENST00000541817 PSPHP1O15172 72 aa5.01□□□□□ -1.61
CHFR-220ENST00000541817 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
CHFR-220ENST00000541817 A8MUN3 132 aa4.99□□□□□ -1.61
CHFR-220ENST00000541817 ACYP2P14621 99 aa4.99□□□□□ -1.61
CHFR-220ENST00000541817 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
CHFR-220ENST00000541817 HRES1P13985 223 aa4.98□□□□□ -1.61
CHFR-220ENST00000541817 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
CHFR-220ENST00000541817 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
CHFR-220ENST00000541817 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
CHFR-220ENST00000541817 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
CHFR-220ENST00000541817 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
CHFR-220ENST00000541817 Q5VV11 94 aa4.94□□□□□ -1.62
CHFR-220ENST00000541817 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
CHFR-220ENST00000541817 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
CHFR-220ENST00000541817 Q75L30 129 aa4.92□□□□□ -1.62
CHFR-220ENST00000541817 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
CHFR-220ENST00000541817 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
CHFR-220ENST00000541817 A6NED7 52 aa4.89□□□□□ -1.63
CHFR-220ENST00000541817 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
CHFR-220ENST00000541817 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
CHFR-220ENST00000541817 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
CHFR-220ENST00000541817 LCA10Q71F78 164 aa4.86□□□□□ -1.63
CHFR-220ENST00000541817 C20orf166-AS1Q96NR2 134 aa4.84□□□□□ -1.63
CHFR-220ENST00000541817 A6NN06 94 aa4.82□□□□□ -1.64
CHFR-220ENST00000541817 A8MUU9 505 aa4.82□□□□□ -1.64
CHFR-220ENST00000541817 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
CHFR-220ENST00000541817 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
CHFR-220ENST00000541817 A0A1B0GU69 56 aa4.8□□□□□ -1.64
CHFR-220ENST00000541817 KMT2DO14686 5537 aa4.8□□□□□ -1.64
CHFR-220ENST00000541817 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
CHFR-220ENST00000541817 SPINK7P58062 85 aa4.77□□□□□ -1.65
CHFR-220ENST00000541817 A8MU10 97 aa4.74□□□□□ -1.65
CHFR-220ENST00000541817 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
CHFR-220ENST00000541817 H3BS24 57 aa4.7□□□□□ -1.66
CHFR-220ENST00000541817 UQCR11O14957 56 aa4.7□□□□□ -1.66
CHFR-220ENST00000541817 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
CHFR-220ENST00000541817 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
CHFR-220ENST00000541817 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
CHFR-220ENST00000541817 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
CHFR-220ENST00000541817 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
CHFR-220ENST00000541817 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
CHFR-220ENST00000541817 SPRR2EP22531 72 aa4.62□□□□□ -1.67
CHFR-220ENST00000541817 SPRR2BP35325 72 aa4.62□□□□□ -1.67
CHFR-220ENST00000541817 SPRR2AP35326 72 aa4.62□□□□□ -1.67
CHFR-220ENST00000541817 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
CHFR-220ENST00000541817 A0A1B0GU33 70 aa4.56□□□□□ -1.68
CHFR-220ENST00000541817 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
CHFR-220ENST00000541817 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
CHFR-220ENST00000541817 S4R3F8 94 aa4.51□□□□□ -1.69
CHFR-220ENST00000541817 MT1BP07438 61 aa4.5□□□□□ -1.69
CHFR-220ENST00000541817 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
CHFR-220ENST00000541817 H0YAA0 97 aa4.48□□□□□ -1.69
CHFR-220ENST00000541817 K7ERS5 55 aa4.48□□□□□ -1.69
CHFR-220ENST00000541817 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
CHFR-220ENST00000541817 SPRR2DP22532 72 aa4.46□□□□□ -1.7
CHFR-220ENST00000541817 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
CHFR-220ENST00000541817 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
CHFR-220ENST00000541817 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
CHFR-220ENST00000541817 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
CHFR-220ENST00000541817 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
CHFR-220ENST00000541817 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
CHFR-220ENST00000541817 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
CHFR-220ENST00000541817 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
CHFR-220ENST00000541817 ROMO1P60602 79 aa4.32□□□□□ -1.72
CHFR-220ENST00000541817 A0A0D9SG42 100 aa4.31□□□□□ -1.72
CHFR-220ENST00000541817 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
CHFR-220ENST00000541817 P0C880 135 aa4.3□□□□□ -1.72
CHFR-220ENST00000541817 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
CHFR-220ENST00000541817 M0QZ58 72 aa4.28□□□□□ -1.72
CHFR-220ENST00000541817 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
CHFR-220ENST00000541817 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
CHFR-220ENST00000541817 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
CHFR-220ENST00000541817 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
CHFR-220ENST00000541817 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
CHFR-220ENST00000541817 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
CHFR-220ENST00000541817 R4GN34 69 aa4.17□□□□□ -1.74
CHFR-220ENST00000541817 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
CHFR-220ENST00000541817 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms