RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ACYP2P14621 99 aa4.78□□□□□ -1.64
THBS3-210ENST00000541576 J3QL48 77 aa4.78□□□□□ -1.64
THBS3-210ENST00000541576 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
THBS3-210ENST00000541576 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
THBS3-210ENST00000541576 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
THBS3-210ENST00000541576 KRTAP13-3Q3SY46 172 aa4.72□□□□□ -1.65
THBS3-210ENST00000541576 UQCR11O14957 56 aa4.72□□□□□ -1.65
THBS3-210ENST00000541576 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
THBS3-210ENST00000541576 A8MUU9 505 aa4.71□□□□□ -1.66
THBS3-210ENST00000541576 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
THBS3-210ENST00000541576 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
THBS3-210ENST00000541576 XP32Q5T750 250 aa4.67□□□□□ -1.66
THBS3-210ENST00000541576 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.66
THBS3-210ENST00000541576 DMAC1Q96GE9 116 aa4.65□□□□□ -1.66
THBS3-210ENST00000541576 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
THBS3-210ENST00000541576 HERC1Q15751 4861 aa4.64□□□□□ -1.67
THBS3-210ENST00000541576 LPAP08519 4548 aa4.63□□□□□ -1.67
THBS3-210ENST00000541576 LRP2P98164 4655 aa4.62□□□□□ -1.67
THBS3-210ENST00000541576 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
THBS3-210ENST00000541576 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
THBS3-210ENST00000541576 H0YAA0 97 aa4.51□□□□□ -1.69
THBS3-210ENST00000541576 ROMO1P60602 79 aa4.5□□□□□ -1.69
THBS3-210ENST00000541576 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
THBS3-210ENST00000541576 A0A0D9SG42 100 aa4.48□□□□□ -1.69
THBS3-210ENST00000541576 A0A1B0GU33 70 aa4.48□□□□□ -1.69
THBS3-210ENST00000541576 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
THBS3-210ENST00000541576 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
THBS3-210ENST00000541576 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
THBS3-210ENST00000541576 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
THBS3-210ENST00000541576 K7ERS5 55 aa4.42□□□□□ -1.7
THBS3-210ENST00000541576 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
THBS3-210ENST00000541576 P0C880 135 aa4.4□□□□□ -1.7
THBS3-210ENST00000541576 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
THBS3-210ENST00000541576 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
THBS3-210ENST00000541576 MUC2Q02817 5179 aa4.39□□□□□ -1.71
THBS3-210ENST00000541576 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
THBS3-210ENST00000541576 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
THBS3-210ENST00000541576 RNF213Q63HN8 5207 aa4.34□□□□□ -1.72
THBS3-210ENST00000541576 S4R3F8 94 aa4.31□□□□□ -1.72
THBS3-210ENST00000541576 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
THBS3-210ENST00000541576 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
THBS3-210ENST00000541576 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
THBS3-210ENST00000541576 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
THBS3-210ENST00000541576 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.74
THBS3-210ENST00000541576 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
THBS3-210ENST00000541576 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.75
THBS3-210ENST00000541576 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
THBS3-210ENST00000541576 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
THBS3-210ENST00000541576 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
THBS3-210ENST00000541576 MT1HP80294 61 aa4.12□□□□□ -1.75
THBS3-210ENST00000541576 M0R2T5 61 aa4.1□□□□□ -1.75
THBS3-210ENST00000541576 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
THBS3-210ENST00000541576 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
THBS3-210ENST00000541576 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
THBS3-210ENST00000541576 M0QZ58 72 aa3.99□□□□□ -1.77
THBS3-210ENST00000541576 R4GN34 69 aa3.98□□□□□ -1.77
THBS3-210ENST00000541576 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
THBS3-210ENST00000541576 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
THBS3-210ENST00000541576 MT2AP02795 61 aa3.95□□□□□ -1.78
THBS3-210ENST00000541576 MT1FP04733 61 aa3.93□□□□□ -1.78
THBS3-210ENST00000541576 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
THBS3-210ENST00000541576 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
THBS3-210ENST00000541576 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
THBS3-210ENST00000541576 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
THBS3-210ENST00000541576 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
THBS3-210ENST00000541576 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
THBS3-210ENST00000541576 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
THBS3-210ENST00000541576 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
THBS3-210ENST00000541576 LCE2BO14633 110 aa3.71□□□□□ -1.82
THBS3-210ENST00000541576 MT1BP07438 61 aa3.71□□□□□ -1.82
THBS3-210ENST00000541576 USH2AO75445 5202 aa3.68□□□□□ -1.82
THBS3-210ENST00000541576 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
THBS3-210ENST00000541576 MT1XP80297 61 aa3.59□□□□□ -1.83
THBS3-210ENST00000541576 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
THBS3-210ENST00000541576 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
THBS3-210ENST00000541576 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
THBS3-210ENST00000541576 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
THBS3-210ENST00000541576 TNP1P09430 55 aa3.56□□□□□ -1.84
THBS3-210ENST00000541576 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
THBS3-210ENST00000541576 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
THBS3-210ENST00000541576 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
THBS3-210ENST00000541576 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
THBS3-210ENST00000541576 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
THBS3-210ENST00000541576 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
THBS3-210ENST00000541576 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
THBS3-210ENST00000541576 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
THBS3-210ENST00000541576 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
THBS3-210ENST00000541576 KMT2DO14686 5537 aa3.37□□□□□ -1.87
THBS3-210ENST00000541576 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
THBS3-210ENST00000541576 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
THBS3-210ENST00000541576 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
THBS3-210ENST00000541576 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
THBS3-210ENST00000541576 INE1O15225 51 aa3.26□□□□□ -1.89
THBS3-210ENST00000541576 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
THBS3-210ENST00000541576 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
THBS3-210ENST00000541576 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
THBS3-210ENST00000541576 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
THBS3-210ENST00000541576 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
THBS3-210ENST00000541576 MT1EP04732 61 aa3.15□□□□□ -1.91
THBS3-210ENST00000541576 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms