RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 HERC2O95714 4834 aa5.74□□□□□ -1.49
PHACTR3-209ENST00000541461 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
PHACTR3-209ENST00000541461 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
PHACTR3-209ENST00000541461 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
PHACTR3-209ENST00000541461 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
PHACTR3-209ENST00000541461 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
PHACTR3-209ENST00000541461 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
PHACTR3-209ENST00000541461 H0YAA0 97 aa5.69□□□□□ -1.5
PHACTR3-209ENST00000541461 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
PHACTR3-209ENST00000541461 TNXBP22105 4242 aa5.68□□□□□ -1.5
PHACTR3-209ENST00000541461 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
PHACTR3-209ENST00000541461 A8MUU9 505 aa5.65□□□□□ -1.5
PHACTR3-209ENST00000541461 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
PHACTR3-209ENST00000541461 A0A1B0GU33 70 aa5.64□□□□□ -1.51
PHACTR3-209ENST00000541461 ROMO1P60602 79 aa5.64□□□□□ -1.51
PHACTR3-209ENST00000541461 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
PHACTR3-209ENST00000541461 H1FX-AS1Q4G0G2 97 aa5.6□□□□□ -1.51
PHACTR3-209ENST00000541461 DMBT1Q9UGM3 2413 aaPredicted RBP5.58□□□□□ -1.52
PHACTR3-209ENST00000541461 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
PHACTR3-209ENST00000541461 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
PHACTR3-209ENST00000541461 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
PHACTR3-209ENST00000541461 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
PHACTR3-209ENST00000541461 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
PHACTR3-209ENST00000541461 P0C880 135 aa5.51□□□□□ -1.53
PHACTR3-209ENST00000541461 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
PHACTR3-209ENST00000541461 HERC1Q15751 4861 aa5.48□□□□□ -1.53
PHACTR3-209ENST00000541461 K7ERS5 55 aa5.45□□□□□ -1.54
PHACTR3-209ENST00000541461 LPAP08519 4548 aa5.43□□□□□ -1.54
PHACTR3-209ENST00000541461 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
PHACTR3-209ENST00000541461 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
PHACTR3-209ENST00000541461 A0A0D9SG42 100 aa5.39□□□□□ -1.55
PHACTR3-209ENST00000541461 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
PHACTR3-209ENST00000541461 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
PHACTR3-209ENST00000541461 S4R3F8 94 aa5.34□□□□□ -1.56
PHACTR3-209ENST00000541461 LRP2P98164 4655 aa5.33□□□□□ -1.56
PHACTR3-209ENST00000541461 LCE2BO14633 110 aa5.32□□□□□ -1.56
PHACTR3-209ENST00000541461 XP32Q5T750 250 aa5.32□□□□□ -1.56
PHACTR3-209ENST00000541461 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
PHACTR3-209ENST00000541461 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
PHACTR3-209ENST00000541461 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
PHACTR3-209ENST00000541461 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
PHACTR3-209ENST00000541461 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
PHACTR3-209ENST00000541461 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
PHACTR3-209ENST00000541461 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
PHACTR3-209ENST00000541461 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
PHACTR3-209ENST00000541461 MUC2Q02817 5179 aa5.15□□□□□ -1.58
PHACTR3-209ENST00000541461 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
PHACTR3-209ENST00000541461 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
PHACTR3-209ENST00000541461 M0QZ58 72 aa5.08□□□□□ -1.6
PHACTR3-209ENST00000541461 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
PHACTR3-209ENST00000541461 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
PHACTR3-209ENST00000541461 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
PHACTR3-209ENST00000541461 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
PHACTR3-209ENST00000541461 KRTAP4-1Q9BYQ7 146 aa5.02□□□□□ -1.61
PHACTR3-209ENST00000541461 R4GN34 69 aa4.96□□□□□ -1.61
PHACTR3-209ENST00000541461 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
PHACTR3-209ENST00000541461 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
PHACTR3-209ENST00000541461 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
PHACTR3-209ENST00000541461 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
PHACTR3-209ENST00000541461 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
PHACTR3-209ENST00000541461 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
PHACTR3-209ENST00000541461 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
PHACTR3-209ENST00000541461 MT1HP80294 61 aa4.68□□□□□ -1.66
PHACTR3-209ENST00000541461 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
PHACTR3-209ENST00000541461 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
PHACTR3-209ENST00000541461 M0R2T5 61 aa4.64□□□□□ -1.67
PHACTR3-209ENST00000541461 TNP1P09430 55 aa4.55□□□□□ -1.68
PHACTR3-209ENST00000541461 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
PHACTR3-209ENST00000541461 MT2AP02795 61 aa4.46□□□□□ -1.7
PHACTR3-209ENST00000541461 MT1FP04733 61 aa4.45□□□□□ -1.7
PHACTR3-209ENST00000541461 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
PHACTR3-209ENST00000541461 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
PHACTR3-209ENST00000541461 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
PHACTR3-209ENST00000541461 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
PHACTR3-209ENST00000541461 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
PHACTR3-209ENST00000541461 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
PHACTR3-209ENST00000541461 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
PHACTR3-209ENST00000541461 USH2AO75445 5202 aa4.31□□□□□ -1.72
PHACTR3-209ENST00000541461 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
PHACTR3-209ENST00000541461 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
PHACTR3-209ENST00000541461 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
PHACTR3-209ENST00000541461 INE1O15225 51 aa4.29□□□□□ -1.72
PHACTR3-209ENST00000541461 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
PHACTR3-209ENST00000541461 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
PHACTR3-209ENST00000541461 MT1BP07438 61 aa4.17□□□□□ -1.74
PHACTR3-209ENST00000541461 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
PHACTR3-209ENST00000541461 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
PHACTR3-209ENST00000541461 MT1XP80297 61 aa4.15□□□□□ -1.74
PHACTR3-209ENST00000541461 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
PHACTR3-209ENST00000541461 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
PHACTR3-209ENST00000541461 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
PHACTR3-209ENST00000541461 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
PHACTR3-209ENST00000541461 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
PHACTR3-209ENST00000541461 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
PHACTR3-209ENST00000541461 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PHACTR3-209ENST00000541461 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
PHACTR3-209ENST00000541461 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
PHACTR3-209ENST00000541461 KMT2DO14686 5537 aa3.95□□□□□ -1.78
PHACTR3-209ENST00000541461 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
PHACTR3-209ENST00000541461 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms