RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
YBX3-211ENST00000541351 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.45□□□□□ -1.7
YBX3-211ENST00000541351 BPY2O14599 106 aa4.44□□□□□ -1.7
YBX3-211ENST00000541351 ELOF1P60002 83 aaKnown RBP4.44□□□□□ -1.7
YBX3-211ENST00000541351 Q1T7F1 81 aa4.44□□□□□ -1.7
YBX3-211ENST00000541351 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
YBX3-211ENST00000541351 A0A1B0GW54 56 aa4.43□□□□□ -1.7
YBX3-211ENST00000541351 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
YBX3-211ENST00000541351 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
YBX3-211ENST00000541351 IGLV5-48A0A075B6I7 105 aa4.41□□□□□ -1.7
YBX3-211ENST00000541351 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
YBX3-211ENST00000541351 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
YBX3-211ENST00000541351 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
YBX3-211ENST00000541351 Q5VV11 94 aa4.4□□□□□ -1.71
YBX3-211ENST00000541351 IGKV4-1P06312 121 aa4.39□□□□□ -1.71
YBX3-211ENST00000541351 SPRR2DP22532 72 aa4.39□□□□□ -1.71
YBX3-211ENST00000541351 Q6ZQY7 126 aa4.39□□□□□ -1.71
YBX3-211ENST00000541351 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
YBX3-211ENST00000541351 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
YBX3-211ENST00000541351 NDUFB1O75438 58 aa4.36□□□□□ -1.71
YBX3-211ENST00000541351 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
YBX3-211ENST00000541351 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
YBX3-211ENST00000541351 LINC00313P59037 77 aa4.33□□□□□ -1.72
YBX3-211ENST00000541351 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
YBX3-211ENST00000541351 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
YBX3-211ENST00000541351 DSCR10P59022 87 aa4.32□□□□□ -1.72
YBX3-211ENST00000541351 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
YBX3-211ENST00000541351 NDUFS5O43920 106 aa4.31□□□□□ -1.72
YBX3-211ENST00000541351 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
YBX3-211ENST00000541351 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
YBX3-211ENST00000541351 H3BPC8 53 aa4.3□□□□□ -1.72
YBX3-211ENST00000541351 MT1BP07438 61 aa4.3□□□□□ -1.72
YBX3-211ENST00000541351 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
YBX3-211ENST00000541351 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
YBX3-211ENST00000541351 MP68P56378 58 aa4.27□□□□□ -1.73
YBX3-211ENST00000541351 SPINK7P58062 85 aa4.27□□□□□ -1.73
YBX3-211ENST00000541351 Q8N9L7 120 aa4.27□□□□□ -1.73
YBX3-211ENST00000541351 PSPHP1O15172 72 aa4.26□□□□□ -1.73
YBX3-211ENST00000541351 A8MUN3 132 aa4.25□□□□□ -1.73
YBX3-211ENST00000541351 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
YBX3-211ENST00000541351 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
YBX3-211ENST00000541351 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
YBX3-211ENST00000541351 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
YBX3-211ENST00000541351 LOC101927531A0A1B0GV80 90 aa4.23□□□□□ -1.73
YBX3-211ENST00000541351 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
YBX3-211ENST00000541351 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
YBX3-211ENST00000541351 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
YBX3-211ENST00000541351 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
YBX3-211ENST00000541351 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
YBX3-211ENST00000541351 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
YBX3-211ENST00000541351 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
YBX3-211ENST00000541351 A0A087WSZ3 146 aa4.18□□□□□ -1.74
YBX3-211ENST00000541351 K7EQZ3 153 aa4.18□□□□□ -1.74
YBX3-211ENST00000541351 A6NED7 52 aa4.17□□□□□ -1.74
YBX3-211ENST00000541351 LCA10Q71F78 164 aa4.17□□□□□ -1.74
YBX3-211ENST00000541351 H0Y9P7 68 aa4.16□□□□□ -1.74
YBX3-211ENST00000541351 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
YBX3-211ENST00000541351 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
YBX3-211ENST00000541351 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
YBX3-211ENST00000541351 COA5Q86WW8 74 aa4.14□□□□□ -1.75
YBX3-211ENST00000541351 C8orf87E5RJ46 101 aa4.13□□□□□ -1.75
YBX3-211ENST00000541351 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
YBX3-211ENST00000541351 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
YBX3-211ENST00000541351 A8MU10 97 aa4.11□□□□□ -1.75
YBX3-211ENST00000541351 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
YBX3-211ENST00000541351 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
YBX3-211ENST00000541351 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
YBX3-211ENST00000541351 LINC00472Q9H8W2 130 aa4.05□□□□□ -1.76
YBX3-211ENST00000541351 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
YBX3-211ENST00000541351 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
YBX3-211ENST00000541351 A0A1B0GVX0 72 aa4.02□□□□□ -1.77
YBX3-211ENST00000541351 DEFB116Q30KQ4 102 aa4.02□□□□□ -1.77
YBX3-211ENST00000541351 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
YBX3-211ENST00000541351 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
YBX3-211ENST00000541351 LINC01554Q52M75 96 aa4□□□□□ -1.77
YBX3-211ENST00000541351 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
YBX3-211ENST00000541351 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
YBX3-211ENST00000541351 ACYP2P14621 99 aa3.96□□□□□ -1.78
YBX3-211ENST00000541351 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
YBX3-211ENST00000541351 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
YBX3-211ENST00000541351 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
YBX3-211ENST00000541351 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
YBX3-211ENST00000541351 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
YBX3-211ENST00000541351 S4R3F8 94 aa3.92□□□□□ -1.78
YBX3-211ENST00000541351 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
YBX3-211ENST00000541351 A0A1B0GU69 56 aa3.9□□□□□ -1.79
YBX3-211ENST00000541351 UQCR11O14957 56 aa3.9□□□□□ -1.79
YBX3-211ENST00000541351 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
YBX3-211ENST00000541351 MT1XP80297 61 aa3.89□□□□□ -1.79
YBX3-211ENST00000541351 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
YBX3-211ENST00000541351 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
YBX3-211ENST00000541351 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
YBX3-211ENST00000541351 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
YBX3-211ENST00000541351 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
YBX3-211ENST00000541351 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
YBX3-211ENST00000541351 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
YBX3-211ENST00000541351 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
YBX3-211ENST00000541351 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
YBX3-211ENST00000541351 KRTAP3-1Q9BYR8 98 aa3.85□□□□□ -1.79
YBX3-211ENST00000541351 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms