RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
LEMD3-203ENST00000541171 TRAV22A0A0B4J277 110 aa10.71□□□□□ -0.69
LEMD3-203ENST00000541171 KRTAP10-5P60370 271 aa10.68□□□□□ -0.7
LEMD3-203ENST00000541171 A0A087WVE0 104 aa10.65□□□□□ -0.7
LEMD3-203ENST00000541171 UQCRQO14949 82 aa10.65□□□□□ -0.7
LEMD3-203ENST00000541171 LOC101927531A0A1B0GV80 90 aa10.63□□□□□ -0.71
LEMD3-203ENST00000541171 KRTAP20-1Q3LI63 56 aa10.63□□□□□ -0.71
LEMD3-203ENST00000541171 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
LEMD3-203ENST00000541171 CYP4F30PQ9H0H9 118 aa10.62□□□□□ -0.71
LEMD3-203ENST00000541171 ATOX1O00244 68 aa10.59□□□□□ -0.71
LEMD3-203ENST00000541171 H0Y9P7 68 aa10.55□□□□□ -0.72
LEMD3-203ENST00000541171 KRTAP5-9P26371 169 aa10.53□□□□□ -0.72
LEMD3-203ENST00000541171 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
LEMD3-203ENST00000541171 IMUPQ9GZP8 106 aa10.52□□□□□ -0.73
LEMD3-203ENST00000541171 KMT2DO14686 5537 aa10.51□□□□□ -0.73
LEMD3-203ENST00000541171 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
LEMD3-203ENST00000541171 MDN1Q9NU22 5596 aa10.49□□□□□ -0.73
LEMD3-203ENST00000541171 K7ERU9 68 aa10.44□□□□□ -0.74
LEMD3-203ENST00000541171 MP68P56378 58 aa10.41□□□□□ -0.74
LEMD3-203ENST00000541171 CRIPTQ9P021 101 aa10.41□□□□□ -0.74
LEMD3-203ENST00000541171 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
LEMD3-203ENST00000541171 H3BPC8 53 aa10.33□□□□□ -0.76
LEMD3-203ENST00000541171 SCGB1A1P11684 91 aa10.33□□□□□ -0.76
LEMD3-203ENST00000541171 A8MUN3 132 aa10.3□□□□□ -0.76
LEMD3-203ENST00000541171 MT-ATP8P03928 68 aa10.29□□□□□ -0.76
LEMD3-203ENST00000541171 KRTAP2-3P0C7H8 128 aa10.23□□□□□ -0.77
LEMD3-203ENST00000541171 KRTAP2-4Q9BYR9 128 aa10.23□□□□□ -0.77
LEMD3-203ENST00000541171 NDUFC1O43677 76 aa10.21□□□□□ -0.77
LEMD3-203ENST00000541171 SPRR2FQ96RM1 72 aa10.2□□□□□ -0.78
LEMD3-203ENST00000541171 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
LEMD3-203ENST00000541171 H0YAA0 97 aa10.16□□□□□ -0.78
LEMD3-203ENST00000541171 SPRR2EP22531 72 aa10.15□□□□□ -0.78
LEMD3-203ENST00000541171 SPRR2BP35325 72 aa10.15□□□□□ -0.78
LEMD3-203ENST00000541171 SPRR2AP35326 72 aa10.15□□□□□ -0.78
LEMD3-203ENST00000541171 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
LEMD3-203ENST00000541171 TRAV7A0A075B6U4 112 aa10.12□□□□□ -0.79
LEMD3-203ENST00000541171 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
LEMD3-203ENST00000541171 MT1XP80297 61 aa10.08□□□□□ -0.8
LEMD3-203ENST00000541171 DMAC1Q96GE9 116 aa10.08□□□□□ -0.8
LEMD3-203ENST00000541171 KRTAP8-1Q8IUC2 63 aa10.03□□□□□ -0.8
LEMD3-203ENST00000541171 PLAC4Q8WY50 150 aa10.03□□□□□ -0.8
LEMD3-203ENST00000541171 LCE1AQ5T7P2 110 aa9.92□□□□□ -0.82
LEMD3-203ENST00000541171 R4GN34 69 aa9.89□□□□□ -0.83
LEMD3-203ENST00000541171 KRTAP2-2Q9BYT5 123 aa9.88□□□□□ -0.83
LEMD3-203ENST00000541171 KRTAP2-1Q9BYU5 128 aa9.88□□□□□ -0.83
LEMD3-203ENST00000541171 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
LEMD3-203ENST00000541171 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
LEMD3-203ENST00000541171 ACYP2P14621 99 aa9.85□□□□□ -0.83
LEMD3-203ENST00000541171 P0C880 135 aa9.84□□□□□ -0.83
LEMD3-203ENST00000541171 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
LEMD3-203ENST00000541171 KRTAP4-8A0A0G2JLE6 195 aa9.82□□□□□ -0.84
LEMD3-203ENST00000541171 SPRR2DP22532 72 aa9.82□□□□□ -0.84
LEMD3-203ENST00000541171 KRTAP4-8Q9BYQ9 185 aa9.82□□□□□ -0.84
LEMD3-203ENST00000541171 M0QZ58 72 aa9.81□□□□□ -0.84
LEMD3-203ENST00000541171 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
LEMD3-203ENST00000541171 SPANXA2-OT1Q8N9U9 137 aa9.77□□□□□ -0.85
LEMD3-203ENST00000541171 LINC01554Q52M75 96 aa9.74□□□□□ -0.85
LEMD3-203ENST00000541171 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
LEMD3-203ENST00000541171 CHKB-CPT1BH3BT56 60 aa9.66□□□□□ -0.86
LEMD3-203ENST00000541171 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
LEMD3-203ENST00000541171 KRTAP10-7P60409 375 aaPredicted RBP9.64□□□□□ -0.87
LEMD3-203ENST00000541171 COX7CP15954 63 aa9.63□□□□□ -0.87
LEMD3-203ENST00000541171 LCE3BQ5TA77 95 aa9.57□□□□□ -0.88
LEMD3-203ENST00000541171 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
LEMD3-203ENST00000541171 H7BZZ5 65 aa9.43□□□□□ -0.9
LEMD3-203ENST00000541171 COA5Q86WW8 74 aa9.43□□□□□ -0.9
LEMD3-203ENST00000541171 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
LEMD3-203ENST00000541171 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
LEMD3-203ENST00000541171 GPR98Q8WXG9 6306 aa9.22□□□□□ -0.93
LEMD3-203ENST00000541171 DSTQ03001 7570 aaKnown RBP9.2□□□□□ -0.94
LEMD3-203ENST00000541171 SEC61GP60059 68 aa9.18□□□□□ -0.94
LEMD3-203ENST00000541171 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
LEMD3-203ENST00000541171 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
LEMD3-203ENST00000541171 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
LEMD3-203ENST00000541171 ATP5EP56381 51 aaPredicted RBP9.1□□□□□ -0.95
LEMD3-203ENST00000541171 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
LEMD3-203ENST00000541171 KRTAP4-9Q9BYQ8 210 aa9.05□□□□□ -0.96
LEMD3-203ENST00000541171 LCE5AQ5TCM9 118 aa9.03□□□□□ -0.96
LEMD3-203ENST00000541171 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
LEMD3-203ENST00000541171 A0A1B0GU33 70 aa8.98□□□□□ -0.97
LEMD3-203ENST00000541171 MT1EP04732 61 aa8.96□□□□□ -0.98
LEMD3-203ENST00000541171 KRTAP19-3Q7Z4W3 81 aa8.96□□□□□ -0.98
LEMD3-203ENST00000541171 A0A1B0GU69 56 aa8.94□□□□□ -0.98
LEMD3-203ENST00000541171 TMEM258P61165 79 aa8.92□□□□□ -0.98
LEMD3-203ENST00000541171 SPATA8Q6RVD6 105 aa8.9□□□□□ -0.98
LEMD3-203ENST00000541171 A0A0D9SG42 100 aa8.86□□□□□ -0.99
LEMD3-203ENST00000541171 PRR15LQ9BU68 103 aa8.78□□□□□ -1
LEMD3-203ENST00000541171 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
LEMD3-203ENST00000541171 LCE1DQ5T752 114 aa8.75□□□□□ -1.01
LEMD3-203ENST00000541171 KRTAP12-1P59990 96 aa8.74□□□□□ -1.01
LEMD3-203ENST00000541171 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
LEMD3-203ENST00000541171 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
LEMD3-203ENST00000541171 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
LEMD3-203ENST00000541171 MT1GP13640 62 aa8.7□□□□□ -1.02
LEMD3-203ENST00000541171 MT4P47944 62 aa8.64□□□□□ -1.03
LEMD3-203ENST00000541171 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
LEMD3-203ENST00000541171 HMCN1Q96RW7 5635 aa8.62□□□□□ -1.03
LEMD3-203ENST00000541171 A8MU10 97 aa8.62□□□□□ -1.03
LEMD3-203ENST00000541171 LCE4AQ5TA78 99 aa8.6□□□□□ -1.03
LEMD3-203ENST00000541171 MT1MQ8N339 61 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms