RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 LINC01554Q52M75 96 aa8.64□□□□□ -1.03
CACNB3-203ENST00000540990 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
CACNB3-203ENST00000540990 HSPG2P98160 4391 aa8.61□□□□□ -1.03
CACNB3-203ENST00000540990 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
CACNB3-203ENST00000540990 LRP1Q07954 4544 aaKnown RBP8.59□□□□□ -1.03
CACNB3-203ENST00000540990 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
CACNB3-203ENST00000540990 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
CACNB3-203ENST00000540990 K7ERS5 55 aa8.52□□□□□ -1.04
CACNB3-203ENST00000540990 S4R3F8 94 aa8.52□□□□□ -1.04
CACNB3-203ENST00000540990 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
CACNB3-203ENST00000540990 RYR1P21817 5038 aa8.51□□□□□ -1.05
CACNB3-203ENST00000540990 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
CACNB3-203ENST00000540990 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
CACNB3-203ENST00000540990 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
CACNB3-203ENST00000540990 DMBT1Q9UGM3 2413 aaPredicted RBP8.4□□□□□ -1.06
CACNB3-203ENST00000540990 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
CACNB3-203ENST00000540990 ROMO1P60602 79 aa8.36□□□□□ -1.07
CACNB3-203ENST00000540990 BIRC6Q9NR09 4857 aa8.35□□□□□ -1.07
CACNB3-203ENST00000540990 P0C880 135 aa8.34□□□□□ -1.07
CACNB3-203ENST00000540990 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
CACNB3-203ENST00000540990 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.09
CACNB3-203ENST00000540990 A0A0D9SG42 100 aa8.26□□□□□ -1.09
CACNB3-203ENST00000540990 M0QZ58 72 aa8.18□□□□□ -1.1
CACNB3-203ENST00000540990 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
CACNB3-203ENST00000540990 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
CACNB3-203ENST00000540990 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
CACNB3-203ENST00000540990 LRP2P98164 4655 aa8.12□□□□□ -1.11
CACNB3-203ENST00000540990 HERC2O95714 4834 aa8.12□□□□□ -1.11
CACNB3-203ENST00000540990 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
CACNB3-203ENST00000540990 LPAP08519 4548 aa8.1□□□□□ -1.11
CACNB3-203ENST00000540990 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
CACNB3-203ENST00000540990 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
CACNB3-203ENST00000540990 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.13
CACNB3-203ENST00000540990 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
CACNB3-203ENST00000540990 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
CACNB3-203ENST00000540990 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
CACNB3-203ENST00000540990 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
CACNB3-203ENST00000540990 J3QL48 77 aa7.88□□□□□ -1.15
CACNB3-203ENST00000540990 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
CACNB3-203ENST00000540990 R4GN34 69 aa7.87□□□□□ -1.15
CACNB3-203ENST00000540990 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
CACNB3-203ENST00000540990 H3BS24 57 aa7.75□□□□□ -1.17
CACNB3-203ENST00000540990 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
CACNB3-203ENST00000540990 HERC1Q15751 4861 aa7.55□□□□□ -1.2
CACNB3-203ENST00000540990 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
CACNB3-203ENST00000540990 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
CACNB3-203ENST00000540990 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
CACNB3-203ENST00000540990 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
CACNB3-203ENST00000540990 NDUFAF8A1L188 74 aa7.42□□□□□ -1.22
CACNB3-203ENST00000540990 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
CACNB3-203ENST00000540990 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
CACNB3-203ENST00000540990 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
CACNB3-203ENST00000540990 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
CACNB3-203ENST00000540990 SPRR2GQ9BYE4 73 aa7.26□□□□□ -1.25
CACNB3-203ENST00000540990 TNP1P09430 55 aa7.24□□□□□ -1.25
CACNB3-203ENST00000540990 MUC2Q02817 5179 aa7.23□□□□□ -1.25
CACNB3-203ENST00000540990 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
CACNB3-203ENST00000540990 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
CACNB3-203ENST00000540990 MT1HP80294 61 aa7.11□□□□□ -1.27
CACNB3-203ENST00000540990 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
CACNB3-203ENST00000540990 MT2AP02795 61 aa7.01□□□□□ -1.29
CACNB3-203ENST00000540990 M0R2T5 61 aa6.99□□□□□ -1.29
CACNB3-203ENST00000540990 MT1FP04733 61 aa6.99□□□□□ -1.29
CACNB3-203ENST00000540990 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
CACNB3-203ENST00000540990 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
CACNB3-203ENST00000540990 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
CACNB3-203ENST00000540990 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
CACNB3-203ENST00000540990 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
CACNB3-203ENST00000540990 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
CACNB3-203ENST00000540990 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
CACNB3-203ENST00000540990 MT1BP07438 61 aa6.81□□□□□ -1.32
CACNB3-203ENST00000540990 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
CACNB3-203ENST00000540990 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
CACNB3-203ENST00000540990 MT1XP80297 61 aa6.75□□□□□ -1.33
CACNB3-203ENST00000540990 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
CACNB3-203ENST00000540990 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
CACNB3-203ENST00000540990 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
CACNB3-203ENST00000540990 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CACNB3-203ENST00000540990 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
CACNB3-203ENST00000540990 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
CACNB3-203ENST00000540990 LCE2BO14633 110 aa6.38□□□□□ -1.39
CACNB3-203ENST00000540990 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
CACNB3-203ENST00000540990 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
CACNB3-203ENST00000540990 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
CACNB3-203ENST00000540990 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
CACNB3-203ENST00000540990 INE1O15225 51 aa6.13□□□□□ -1.43
CACNB3-203ENST00000540990 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
CACNB3-203ENST00000540990 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
CACNB3-203ENST00000540990 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CACNB3-203ENST00000540990 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
CACNB3-203ENST00000540990 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
CACNB3-203ENST00000540990 USH2AO75445 5202 aa5.97□□□□□ -1.45
CACNB3-203ENST00000540990 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
CACNB3-203ENST00000540990 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
CACNB3-203ENST00000540990 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
CACNB3-203ENST00000540990 MT1EP04732 61 aa5.85□□□□□ -1.47
CACNB3-203ENST00000540990 MT1LQ93083 61 aa5.85□□□□□ -1.47
CACNB3-203ENST00000540990 KMT2DO14686 5537 aa5.85□□□□□ -1.47
CACNB3-203ENST00000540990 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
CACNB3-203ENST00000540990 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms