RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
CD9-209ENST00000540891 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
CD9-209ENST00000540891 A8MUN3 132 aa7.65□□□□□ -1.18
CD9-209ENST00000540891 MT-ATP8P03928 68 aa7.65□□□□□ -1.18
CD9-209ENST00000540891 SCGB1A1P11684 91 aa7.64□□□□□ -1.19
CD9-209ENST00000540891 H3BPC8 53 aa7.63□□□□□ -1.19
CD9-209ENST00000540891 K7ERU9 68 aa7.63□□□□□ -1.19
CD9-209ENST00000540891 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
CD9-209ENST00000540891 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
CD9-209ENST00000540891 NDUFC1O43677 76 aa7.59□□□□□ -1.19
CD9-209ENST00000540891 MT1BP07438 61 aa7.56□□□□□ -1.2
CD9-209ENST00000540891 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
CD9-209ENST00000540891 H0YAA0 97 aa7.53□□□□□ -1.2
CD9-209ENST00000540891 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
CD9-209ENST00000540891 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
CD9-209ENST00000540891 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
CD9-209ENST00000540891 Q5VV11 94 aa7.49□□□□□ -1.21
CD9-209ENST00000540891 CRIPTQ9P021 101 aa7.49□□□□□ -1.21
CD9-209ENST00000540891 TRAV7A0A075B6U4 112 aa7.48□□□□□ -1.21
CD9-209ENST00000540891 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
CD9-209ENST00000540891 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
CD9-209ENST00000540891 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
CD9-209ENST00000540891 A6NN06 94 aa7.36□□□□□ -1.23
CD9-209ENST00000540891 P0C880 135 aa7.33□□□□□ -1.24
CD9-209ENST00000540891 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
CD9-209ENST00000540891 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
CD9-209ENST00000540891 ACYP2P14621 99 aa7.31□□□□□ -1.24
CD9-209ENST00000540891 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
CD9-209ENST00000540891 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
CD9-209ENST00000540891 C20orf197Q8N268 126 aa7.26□□□□□ -1.25
CD9-209ENST00000540891 R4GN34 69 aa7.22□□□□□ -1.25
CD9-209ENST00000540891 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
CD9-209ENST00000540891 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
CD9-209ENST00000540891 M0QZ58 72 aa7.19□□□□□ -1.26
CD9-209ENST00000540891 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
CD9-209ENST00000540891 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
CD9-209ENST00000540891 MT1XP80297 61 aa7.12□□□□□ -1.27
CD9-209ENST00000540891 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
CD9-209ENST00000540891 COX7CP15954 63 aa7.1□□□□□ -1.27
CD9-209ENST00000540891 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
CD9-209ENST00000540891 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
CD9-209ENST00000540891 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
CD9-209ENST00000540891 COA5Q86WW8 74 aa7.01□□□□□ -1.29
CD9-209ENST00000540891 H7BZZ5 65 aa6.99□□□□□ -1.29
CD9-209ENST00000540891 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
CD9-209ENST00000540891 NEBP20929 6669 aa6.97□□□□□ -1.29
CD9-209ENST00000540891 KRTAP5-9P26371 169 aa6.96□□□□□ -1.3
CD9-209ENST00000540891 KMT2DO14686 5537 aa6.94□□□□□ -1.3
CD9-209ENST00000540891 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
CD9-209ENST00000540891 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
CD9-209ENST00000540891 ANAPC13Q9BS18 74 aa6.89□□□□□ -1.31
CD9-209ENST00000540891 PCP4P48539 62 aa6.86□□□□□ -1.31
CD9-209ENST00000540891 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
CD9-209ENST00000540891 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
CD9-209ENST00000540891 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
CD9-209ENST00000540891 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
CD9-209ENST00000540891 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
CD9-209ENST00000540891 SEC61GP60059 68 aa6.77□□□□□ -1.33
CD9-209ENST00000540891 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
CD9-209ENST00000540891 SERP1Q9Y6X1 66 aa6.77□□□□□ -1.33
CD9-209ENST00000540891 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
CD9-209ENST00000540891 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
CD9-209ENST00000540891 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
CD9-209ENST00000540891 A0A1B0GU33 70 aa6.69□□□□□ -1.34
CD9-209ENST00000540891 A0A0D9SG42 100 aa6.66□□□□□ -1.34
CD9-209ENST00000540891 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
CD9-209ENST00000540891 A0A1B0GU69 56 aa6.62□□□□□ -1.35
CD9-209ENST00000540891 SPRR2EP22531 72 aa6.62□□□□□ -1.35
CD9-209ENST00000540891 SPRR2BP35325 72 aa6.62□□□□□ -1.35
CD9-209ENST00000540891 SPRR2AP35326 72 aa6.62□□□□□ -1.35
CD9-209ENST00000540891 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
CD9-209ENST00000540891 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
CD9-209ENST00000540891 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
CD9-209ENST00000540891 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
CD9-209ENST00000540891 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
CD9-209ENST00000540891 TMEM258P61165 79 aa6.51□□□□□ -1.37
CD9-209ENST00000540891 A8MU10 97 aa6.49□□□□□ -1.37
CD9-209ENST00000540891 SMIM26A0A096LP01 95 aa6.47□□□□□ -1.37
CD9-209ENST00000540891 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
CD9-209ENST00000540891 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
CD9-209ENST00000540891 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
CD9-209ENST00000540891 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
CD9-209ENST00000540891 SPRR2DP22532 72 aa6.39□□□□□ -1.39
CD9-209ENST00000540891 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
CD9-209ENST00000540891 MT1EP04732 61 aa6.29□□□□□ -1.4
CD9-209ENST00000540891 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
CD9-209ENST00000540891 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
CD9-209ENST00000540891 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
CD9-209ENST00000540891 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
CD9-209ENST00000540891 UQCR11O14957 56 aa6.24□□□□□ -1.41
CD9-209ENST00000540891 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
CD9-209ENST00000540891 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
CD9-209ENST00000540891 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
CD9-209ENST00000540891 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
CD9-209ENST00000540891 TNP1P09430 55 aa6.17□□□□□ -1.42
CD9-209ENST00000540891 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
CD9-209ENST00000540891 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
CD9-209ENST00000540891 Q1T7F1 81 aa6.11□□□□□ -1.43
CD9-209ENST00000540891 PSPHP1O15172 72 aa6.1□□□□□ -1.43
CD9-209ENST00000540891 V9GYY9 64 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms