RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
SFI1-229ENST00000540643 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
SFI1-229ENST00000540643 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
SFI1-229ENST00000540643 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
SFI1-229ENST00000540643 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
SFI1-229ENST00000540643 FRAS1Q86XX4 4008 aa6.2□□□□□ -1.42
SFI1-229ENST00000540643 KRTAP3-2Q9BYR7 98 aa6.19□□□□□ -1.42
SFI1-229ENST00000540643 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
SFI1-229ENST00000540643 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
SFI1-229ENST00000540643 DNAH17Q9UFH2 4485 aa6.17□□□□□ -1.42
SFI1-229ENST00000540643 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
SFI1-229ENST00000540643 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.42
SFI1-229ENST00000540643 HYDINQ4G0P3 5121 aa6.15□□□□□ -1.43
SFI1-229ENST00000540643 M0R2T5 61 aa6.13□□□□□ -1.43
SFI1-229ENST00000540643 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
SFI1-229ENST00000540643 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
SFI1-229ENST00000540643 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
SFI1-229ENST00000540643 FAT1Q14517 4588 aa6.09□□□□□ -1.43
SFI1-229ENST00000540643 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
SFI1-229ENST00000540643 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
SFI1-229ENST00000540643 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
SFI1-229ENST00000540643 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
SFI1-229ENST00000540643 DYNC1H1Q14204 4646 aaKnown RBP6.01□□□□□ -1.45
SFI1-229ENST00000540643 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
SFI1-229ENST00000540643 SACSQ9NZJ4 4579 aa5.99□□□□□ -1.45
SFI1-229ENST00000540643 KMT2CQ8NEZ4 4911 aaKnown RBP5.94□□□□□ -1.46
SFI1-229ENST00000540643 FAT2Q9NYQ8 4349 aa5.92□□□□□ -1.46
SFI1-229ENST00000540643 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
SFI1-229ENST00000540643 PKD1P98161 4303 aa5.85□□□□□ -1.47
SFI1-229ENST00000540643 KIAA1109Q2LD37 5005 aa5.83□□□□□ -1.48
SFI1-229ENST00000540643 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
SFI1-229ENST00000540643 RYR2Q92736 4967 aa5.82□□□□□ -1.48
SFI1-229ENST00000540643 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
SFI1-229ENST00000540643 MYCBP2O75592 4640 aa5.8□□□□□ -1.48
SFI1-229ENST00000540643 RYR3Q15413 4870 aa5.78□□□□□ -1.48
SFI1-229ENST00000540643 RYR1P21817 5038 aa5.71□□□□□ -1.5
SFI1-229ENST00000540643 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
SFI1-229ENST00000540643 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
SFI1-229ENST00000540643 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
SFI1-229ENST00000540643 MT1HL1P0DM35 61 aa5.65□□□□□ -1.51
SFI1-229ENST00000540643 HSPG2P98160 4391 aa5.6□□□□□ -1.51
SFI1-229ENST00000540643 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SFI1-229ENST00000540643 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
SFI1-229ENST00000540643 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
SFI1-229ENST00000540643 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SFI1-229ENST00000540643 LRP2P98164 4655 aa5.46□□□□□ -1.54
SFI1-229ENST00000540643 HERC2O95714 4834 aa5.41□□□□□ -1.54
SFI1-229ENST00000540643 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
SFI1-229ENST00000540643 TNXBP22105 4242 aa5.4□□□□□ -1.54
SFI1-229ENST00000540643 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
SFI1-229ENST00000540643 LPAP08519 4548 aa5.36□□□□□ -1.55
SFI1-229ENST00000540643 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
SFI1-229ENST00000540643 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SFI1-229ENST00000540643 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
SFI1-229ENST00000540643 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
SFI1-229ENST00000540643 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
SFI1-229ENST00000540643 MUC2Q02817 5179 aa5.15□□□□□ -1.58
SFI1-229ENST00000540643 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
SFI1-229ENST00000540643 HERC1Q15751 4861 aa5.14□□□□□ -1.59
SFI1-229ENST00000540643 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
SFI1-229ENST00000540643 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
SFI1-229ENST00000540643 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
SFI1-229ENST00000540643 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
SFI1-229ENST00000540643 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
SFI1-229ENST00000540643 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
SFI1-229ENST00000540643 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
SFI1-229ENST00000540643 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
SFI1-229ENST00000540643 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
SFI1-229ENST00000540643 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
SFI1-229ENST00000540643 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
SFI1-229ENST00000540643 MT1HP80294 61 aa4.78□□□□□ -1.64
SFI1-229ENST00000540643 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
SFI1-229ENST00000540643 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
SFI1-229ENST00000540643 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
SFI1-229ENST00000540643 MT2AP02795 61 aa4.7□□□□□ -1.66
SFI1-229ENST00000540643 MT1FP04733 61 aa4.66□□□□□ -1.66
SFI1-229ENST00000540643 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SFI1-229ENST00000540643 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
SFI1-229ENST00000540643 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
SFI1-229ENST00000540643 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
SFI1-229ENST00000540643 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.68
SFI1-229ENST00000540643 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
SFI1-229ENST00000540643 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
SFI1-229ENST00000540643 USH2AO75445 5202 aa4.38□□□□□ -1.71
SFI1-229ENST00000540643 MT1BP07438 61 aa4.38□□□□□ -1.71
SFI1-229ENST00000540643 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
SFI1-229ENST00000540643 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
SFI1-229ENST00000540643 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
SFI1-229ENST00000540643 PRM1P04553 51 aa4.33□□□□□ -1.72
SFI1-229ENST00000540643 MT1XP80297 61 aa4.32□□□□□ -1.72
SFI1-229ENST00000540643 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
SFI1-229ENST00000540643 LCE2BO14633 110 aa4.27□□□□□ -1.73
SFI1-229ENST00000540643 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
SFI1-229ENST00000540643 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
SFI1-229ENST00000540643 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
SFI1-229ENST00000540643 MT1GP13640 62 aa4.18□□□□□ -1.74
SFI1-229ENST00000540643 KMT2DO14686 5537 aa4.18□□□□□ -1.74
SFI1-229ENST00000540643 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
SFI1-229ENST00000540643 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
SFI1-229ENST00000540643 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms