RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
CCDC60-204ENST00000539847 KRTAP11-1Q8IUC1 163 aa4.53□□□□□ -1.68
CCDC60-204ENST00000539847 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
CCDC60-204ENST00000539847 C8orf87E5RJ46 101 aa4.52□□□□□ -1.69
CCDC60-204ENST00000539847 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
CCDC60-204ENST00000539847 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
CCDC60-204ENST00000539847 SPINK7P58062 85 aa4.51□□□□□ -1.69
CCDC60-204ENST00000539847 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
CCDC60-204ENST00000539847 CHTF8P0CG12 524 aa4.5□□□□□ -1.69
CCDC60-204ENST00000539847 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
CCDC60-204ENST00000539847 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
CCDC60-204ENST00000539847 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
CCDC60-204ENST00000539847 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
CCDC60-204ENST00000539847 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
CCDC60-204ENST00000539847 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
CCDC60-204ENST00000539847 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
CCDC60-204ENST00000539847 ZNF861PO60384 105 aa4.45□□□□□ -1.7
CCDC60-204ENST00000539847 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
CCDC60-204ENST00000539847 Q5W150 140 aa4.43□□□□□ -1.7
CCDC60-204ENST00000539847 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
CCDC60-204ENST00000539847 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
CCDC60-204ENST00000539847 LRP2P98164 4655 aa4.42□□□□□ -1.7
CCDC60-204ENST00000539847 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
CCDC60-204ENST00000539847 A0A1B0GU69 56 aa4.41□□□□□ -1.7
CCDC60-204ENST00000539847 UQCR11O14957 56 aa4.41□□□□□ -1.7
CCDC60-204ENST00000539847 LINC00313P59037 77 aa4.41□□□□□ -1.7
CCDC60-204ENST00000539847 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
CCDC60-204ENST00000539847 PANO1I0J062 215 aa4.39□□□□□ -1.71
CCDC60-204ENST00000539847 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
CCDC60-204ENST00000539847 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
CCDC60-204ENST00000539847 TNXBP22105 4242 aa4.38□□□□□ -1.71
CCDC60-204ENST00000539847 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
CCDC60-204ENST00000539847 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CCDC60-204ENST00000539847 RETNLBQ9BQ08 111 aa4.36□□□□□ -1.71
CCDC60-204ENST00000539847 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
CCDC60-204ENST00000539847 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
CCDC60-204ENST00000539847 KRTAP16-1A8MUX0 517 aa4.31□□□□□ -1.72
CCDC60-204ENST00000539847 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
CCDC60-204ENST00000539847 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
CCDC60-204ENST00000539847 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
CCDC60-204ENST00000539847 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
CCDC60-204ENST00000539847 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
CCDC60-204ENST00000539847 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
CCDC60-204ENST00000539847 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
CCDC60-204ENST00000539847 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
CCDC60-204ENST00000539847 SPINK1P00995 79 aa4.2□□□□□ -1.74
CCDC60-204ENST00000539847 A8MUU9 505 aa4.19□□□□□ -1.74
CCDC60-204ENST00000539847 MUC2Q02817 5179 aa4.17□□□□□ -1.74
CCDC60-204ENST00000539847 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
CCDC60-204ENST00000539847 LPAP08519 4548 aa4.16□□□□□ -1.74
CCDC60-204ENST00000539847 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
CCDC60-204ENST00000539847 A0A1B0GU33 70 aa4.15□□□□□ -1.75
CCDC60-204ENST00000539847 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.75
CCDC60-204ENST00000539847 H0YAA0 97 aa4.13□□□□□ -1.75
CCDC60-204ENST00000539847 K7ERS5 55 aa4.13□□□□□ -1.75
CCDC60-204ENST00000539847 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
CCDC60-204ENST00000539847 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
CCDC60-204ENST00000539847 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
CCDC60-204ENST00000539847 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
CCDC60-204ENST00000539847 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
CCDC60-204ENST00000539847 ROMO1P60602 79 aa4.09□□□□□ -1.75
CCDC60-204ENST00000539847 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
CCDC60-204ENST00000539847 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
CCDC60-204ENST00000539847 TPRXLQ17RH7 258 aa4.02□□□□□ -1.77
CCDC60-204ENST00000539847 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
CCDC60-204ENST00000539847 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
CCDC60-204ENST00000539847 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
CCDC60-204ENST00000539847 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
CCDC60-204ENST00000539847 P0C880 135 aa3.9□□□□□ -1.79
CCDC60-204ENST00000539847 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
CCDC60-204ENST00000539847 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
CCDC60-204ENST00000539847 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
CCDC60-204ENST00000539847 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
CCDC60-204ENST00000539847 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
CCDC60-204ENST00000539847 S4R3F8 94 aa3.83□□□□□ -1.8
CCDC60-204ENST00000539847 M0QZ58 72 aa3.82□□□□□ -1.8
CCDC60-204ENST00000539847 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
CCDC60-204ENST00000539847 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
CCDC60-204ENST00000539847 MT3P25713 68 aa3.81□□□□□ -1.8
CCDC60-204ENST00000539847 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
CCDC60-204ENST00000539847 A0A0D9SG42 100 aa3.77□□□□□ -1.81
CCDC60-204ENST00000539847 MT1HP80294 61 aa3.77□□□□□ -1.81
CCDC60-204ENST00000539847 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
CCDC60-204ENST00000539847 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
CCDC60-204ENST00000539847 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CCDC60-204ENST00000539847 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.82
CCDC60-204ENST00000539847 M0R2T5 61 aa3.66□□□□□ -1.82
CCDC60-204ENST00000539847 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
CCDC60-204ENST00000539847 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
CCDC60-204ENST00000539847 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CCDC60-204ENST00000539847 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
CCDC60-204ENST00000539847 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
CCDC60-204ENST00000539847 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CCDC60-204ENST00000539847 USH2AO75445 5202 aa3.56□□□□□ -1.84
CCDC60-204ENST00000539847 R4GN34 69 aa3.54□□□□□ -1.84
CCDC60-204ENST00000539847 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
CCDC60-204ENST00000539847 MT2AP02795 61 aa3.46□□□□□ -1.86
CCDC60-204ENST00000539847 MT1FP04733 61 aa3.42□□□□□ -1.86
CCDC60-204ENST00000539847 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
CCDC60-204ENST00000539847 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms