RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
DDB1-213ENST00000539332 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
DDB1-213ENST00000539332 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
DDB1-213ENST00000539332 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.61
DDB1-213ENST00000539332 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
DDB1-213ENST00000539332 A0A1B0GU69 56 aa4.95□□□□□ -1.62
DDB1-213ENST00000539332 UQCR11O14957 56 aa4.92□□□□□ -1.62
DDB1-213ENST00000539332 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
DDB1-213ENST00000539332 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
DDB1-213ENST00000539332 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.63
DDB1-213ENST00000539332 Q5W150 140 aa4.9□□□□□ -1.63
DDB1-213ENST00000539332 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
DDB1-213ENST00000539332 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
DDB1-213ENST00000539332 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
DDB1-213ENST00000539332 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
DDB1-213ENST00000539332 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
DDB1-213ENST00000539332 HERC1Q15751 4861 aa4.82□□□□□ -1.64
DDB1-213ENST00000539332 A8MUU9 505 aa4.81□□□□□ -1.64
DDB1-213ENST00000539332 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
DDB1-213ENST00000539332 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
DDB1-213ENST00000539332 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
DDB1-213ENST00000539332 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
DDB1-213ENST00000539332 K7ERS5 55 aa4.75□□□□□ -1.65
DDB1-213ENST00000539332 LCE2BO14633 110 aa4.75□□□□□ -1.65
DDB1-213ENST00000539332 CSAG1Q6PB30 78 aa4.74□□□□□ -1.65
DDB1-213ENST00000539332 LPAP08519 4548 aa4.73□□□□□ -1.65
DDB1-213ENST00000539332 XP32Q5T750 250 aa4.72□□□□□ -1.65
DDB1-213ENST00000539332 LRP2P98164 4655 aa4.7□□□□□ -1.66
DDB1-213ENST00000539332 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
DDB1-213ENST00000539332 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
DDB1-213ENST00000539332 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.66
DDB1-213ENST00000539332 ROMO1P60602 79 aa4.65□□□□□ -1.67
DDB1-213ENST00000539332 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
DDB1-213ENST00000539332 A0A1B0GU33 70 aa4.62□□□□□ -1.67
DDB1-213ENST00000539332 H0YAA0 97 aa4.6□□□□□ -1.67
DDB1-213ENST00000539332 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
DDB1-213ENST00000539332 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
DDB1-213ENST00000539332 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
DDB1-213ENST00000539332 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.69
DDB1-213ENST00000539332 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
DDB1-213ENST00000539332 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
DDB1-213ENST00000539332 MUC2Q02817 5179 aa4.5□□□□□ -1.69
DDB1-213ENST00000539332 P0C880 135 aa4.48□□□□□ -1.69
DDB1-213ENST00000539332 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
DDB1-213ENST00000539332 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
DDB1-213ENST00000539332 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
DDB1-213ENST00000539332 S4R3F8 94 aa4.36□□□□□ -1.71
DDB1-213ENST00000539332 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
DDB1-213ENST00000539332 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
DDB1-213ENST00000539332 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
DDB1-213ENST00000539332 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
DDB1-213ENST00000539332 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
DDB1-213ENST00000539332 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
DDB1-213ENST00000539332 A0A0D9SG42 100 aa4.26□□□□□ -1.73
DDB1-213ENST00000539332 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
DDB1-213ENST00000539332 MT1HP80294 61 aa4.24□□□□□ -1.73
DDB1-213ENST00000539332 M0QZ58 72 aa4.2□□□□□ -1.74
DDB1-213ENST00000539332 M0R2T5 61 aa4.18□□□□□ -1.74
DDB1-213ENST00000539332 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
DDB1-213ENST00000539332 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
DDB1-213ENST00000539332 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
DDB1-213ENST00000539332 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
DDB1-213ENST00000539332 R4GN34 69 aa4.1□□□□□ -1.75
DDB1-213ENST00000539332 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
DDB1-213ENST00000539332 MT2AP02795 61 aa4.04□□□□□ -1.76
DDB1-213ENST00000539332 MT1FP04733 61 aa4.02□□□□□ -1.77
DDB1-213ENST00000539332 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
DDB1-213ENST00000539332 KRTAP10-10P60014 251 aa4□□□□□ -1.77
DDB1-213ENST00000539332 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
DDB1-213ENST00000539332 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
DDB1-213ENST00000539332 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
DDB1-213ENST00000539332 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
DDB1-213ENST00000539332 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.8
DDB1-213ENST00000539332 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
DDB1-213ENST00000539332 MT1BP07438 61 aa3.77□□□□□ -1.81
DDB1-213ENST00000539332 USH2AO75445 5202 aa3.76□□□□□ -1.81
DDB1-213ENST00000539332 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
DDB1-213ENST00000539332 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
DDB1-213ENST00000539332 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
DDB1-213ENST00000539332 TNP1P09430 55 aa3.73□□□□□ -1.81
DDB1-213ENST00000539332 INE1O15225 51 aa3.71□□□□□ -1.81
DDB1-213ENST00000539332 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
DDB1-213ENST00000539332 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
DDB1-213ENST00000539332 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
DDB1-213ENST00000539332 MT1XP80297 61 aa3.65□□□□□ -1.83
DDB1-213ENST00000539332 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
DDB1-213ENST00000539332 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
DDB1-213ENST00000539332 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
DDB1-213ENST00000539332 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
DDB1-213ENST00000539332 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
DDB1-213ENST00000539332 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
DDB1-213ENST00000539332 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
DDB1-213ENST00000539332 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
DDB1-213ENST00000539332 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
DDB1-213ENST00000539332 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
DDB1-213ENST00000539332 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
DDB1-213ENST00000539332 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
DDB1-213ENST00000539332 KMT2DO14686 5537 aa3.4□□□□□ -1.87
DDB1-213ENST00000539332 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
DDB1-213ENST00000539332 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms