RNA–Protein interactions for RNA: ENST00000539277.5

TMTC1-203, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMTC1, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-203ENST00000539277 KRTAP16-1A8MUX0 517 aa10.54□□□□□ -0.72
TMTC1-203ENST00000539277 P0C880 135 aa10.54□□□□□ -0.72
TMTC1-203ENST00000539277 TNXBP22105 4242 aa10.52□□□□□ -0.72
TMTC1-203ENST00000539277 FAT3Q8TDW7 4589 aa10.47□□□□□ -0.73
TMTC1-203ENST00000539277 A0A1B0GU33 70 aa10.45□□□□□ -0.74
TMTC1-203ENST00000539277 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
TMTC1-203ENST00000539277 H1FX-AS1Q4G0G2 97 aa10.36□□□□□ -0.75
TMTC1-203ENST00000539277 C9orf92A6NGG3 77 aa10.34□□□□□ -0.75
TMTC1-203ENST00000539277 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
TMTC1-203ENST00000539277 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
TMTC1-203ENST00000539277 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
TMTC1-203ENST00000539277 K7ERS5 55 aa10.29□□□□□ -0.76
TMTC1-203ENST00000539277 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
TMTC1-203ENST00000539277 MT1HL1P0DM35 61 aa10.23□□□□□ -0.77
TMTC1-203ENST00000539277 HERC2O95714 4834 aa10.21□□□□□ -0.78
TMTC1-203ENST00000539277 BIRC6Q9NR09 4857 aa10.21□□□□□ -0.78
TMTC1-203ENST00000539277 NDUFAF8A1L188 74 aa10.15□□□□□ -0.78
TMTC1-203ENST00000539277 COX6B2Q6YFQ2 88 aa10.15□□□□□ -0.78
TMTC1-203ENST00000539277 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
TMTC1-203ENST00000539277 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
TMTC1-203ENST00000539277 C10orf95Q9H7T3 257 aa10.05□□□□□ -0.8
TMTC1-203ENST00000539277 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
TMTC1-203ENST00000539277 LPAP08519 4548 aa10.05□□□□□ -0.8
TMTC1-203ENST00000539277 A0A0D9SG42 100 aa10□□□□□ -0.81
TMTC1-203ENST00000539277 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
TMTC1-203ENST00000539277 KRTAP15-1Q3LI76 137 aa9.98□□□□□ -0.81
TMTC1-203ENST00000539277 LRP2P98164 4655 aa9.98□□□□□ -0.81
TMTC1-203ENST00000539277 PCLOQ9Y6V0 5065 aa9.94□□□□□ -0.82
TMTC1-203ENST00000539277 J3QL48 77 aa9.91□□□□□ -0.82
TMTC1-203ENST00000539277 XP32Q5T750 250 aa9.9□□□□□ -0.83
TMTC1-203ENST00000539277 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
TMTC1-203ENST00000539277 HERC1Q15751 4861 aa9.85□□□□□ -0.83
TMTC1-203ENST00000539277 KRTAP10-6P60371 365 aaPredicted RBP9.8□□□□□ -0.84
TMTC1-203ENST00000539277 A0A0A0MQY5 61 aa9.78□□□□□ -0.84
TMTC1-203ENST00000539277 S4R3F8 94 aa9.68□□□□□ -0.86
TMTC1-203ENST00000539277 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
TMTC1-203ENST00000539277 KRTAP12-2P59991 146 aa9.64□□□□□ -0.87
TMTC1-203ENST00000539277 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
TMTC1-203ENST00000539277 MUC2Q02817 5179 aa9.59□□□□□ -0.87
TMTC1-203ENST00000539277 HMCN2Q8NDA2 5059 aa9.53□□□□□ -0.88
TMTC1-203ENST00000539277 KRTAP12-1P59990 96 aa9.46□□□□□ -0.9
TMTC1-203ENST00000539277 LUZP6Q538Z0 58 aa9.44□□□□□ -0.9
TMTC1-203ENST00000539277 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
TMTC1-203ENST00000539277 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
TMTC1-203ENST00000539277 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
TMTC1-203ENST00000539277 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
TMTC1-203ENST00000539277 RNF213Q63HN8 5207 aa9.28□□□□□ -0.92
TMTC1-203ENST00000539277 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
TMTC1-203ENST00000539277 FAT4Q6V0I7 4981 aa9.15□□□□□ -0.94
TMTC1-203ENST00000539277 M0QZ58 72 aa9.12□□□□□ -0.95
TMTC1-203ENST00000539277 KRTAP19-2Q3LHN2 52 aa9.03□□□□□ -0.96
TMTC1-203ENST00000539277 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.98
TMTC1-203ENST00000539277 R4GN34 69 aa8.86□□□□□ -0.99
TMTC1-203ENST00000539277 LCE2CQ5TA81 110 aa8.79□□□□□ -1
TMTC1-203ENST00000539277 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
TMTC1-203ENST00000539277 M0R2T5 61 aa8.66□□□□□ -1.02
TMTC1-203ENST00000539277 PP632Q6XCG6 107 aa8.65□□□□□ -1.03
TMTC1-203ENST00000539277 MT1HP80294 61 aa8.62□□□□□ -1.03
TMTC1-203ENST00000539277 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
TMTC1-203ENST00000539277 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.07
TMTC1-203ENST00000539277 MT1FP04733 61 aa8.32□□□□□ -1.08
TMTC1-203ENST00000539277 MT2AP02795 61 aa8.31□□□□□ -1.08
TMTC1-203ENST00000539277 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
TMTC1-203ENST00000539277 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
TMTC1-203ENST00000539277 TNP1P09430 55 aa8.23□□□□□ -1.09
TMTC1-203ENST00000539277 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
TMTC1-203ENST00000539277 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
TMTC1-203ENST00000539277 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
TMTC1-203ENST00000539277 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
TMTC1-203ENST00000539277 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
TMTC1-203ENST00000539277 USH2AO75445 5202 aa8.02□□□□□ -1.13
TMTC1-203ENST00000539277 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
TMTC1-203ENST00000539277 INE1O15225 51 aa7.93□□□□□ -1.14
TMTC1-203ENST00000539277 MT1BP07438 61 aa7.85□□□□□ -1.15
TMTC1-203ENST00000539277 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
TMTC1-203ENST00000539277 LCE2BO14633 110 aa7.82□□□□□ -1.16
TMTC1-203ENST00000539277 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
TMTC1-203ENST00000539277 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
TMTC1-203ENST00000539277 MT1XP80297 61 aa7.64□□□□□ -1.19
TMTC1-203ENST00000539277 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
TMTC1-203ENST00000539277 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
TMTC1-203ENST00000539277 KMT2DO14686 5537 aa7.51□□□□□ -1.21
TMTC1-203ENST00000539277 KRTAP10-7P60409 375 aaPredicted RBP7.43□□□□□ -1.22
TMTC1-203ENST00000539277 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
TMTC1-203ENST00000539277 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
TMTC1-203ENST00000539277 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
TMTC1-203ENST00000539277 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
TMTC1-203ENST00000539277 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
TMTC1-203ENST00000539277 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
TMTC1-203ENST00000539277 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
TMTC1-203ENST00000539277 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
TMTC1-203ENST00000539277 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
TMTC1-203ENST00000539277 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
TMTC1-203ENST00000539277 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
TMTC1-203ENST00000539277 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
TMTC1-203ENST00000539277 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
TMTC1-203ENST00000539277 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
TMTC1-203ENST00000539277 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
TMTC1-203ENST00000539277 SYNE2Q8WXH0 6885 aaKnown RBP6.8□□□□□ -1.32
TMTC1-203ENST00000539277 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms