RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 LINC00313P59037 77 aa3.94□□□□□ -1.78
LMO3-220ENST00000539232 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
LMO3-220ENST00000539232 IGFL1Q6UW32 110 aa3.93□□□□□ -1.78
LMO3-220ENST00000539232 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
LMO3-220ENST00000539232 KRTAP3-3Q9BYR6 98 aa3.92□□□□□ -1.78
LMO3-220ENST00000539232 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
LMO3-220ENST00000539232 H3BS24 57 aa3.91□□□□□ -1.78
LMO3-220ENST00000539232 LORP23490 312 aaPredicted RBP3.91□□□□□ -1.78
LMO3-220ENST00000539232 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
LMO3-220ENST00000539232 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
LMO3-220ENST00000539232 A0A087WSZ3 146 aa3.9□□□□□ -1.79
LMO3-220ENST00000539232 SPINK7P58062 85 aa3.9□□□□□ -1.79
LMO3-220ENST00000539232 PCOTHQ58A44 107 aa3.9□□□□□ -1.79
LMO3-220ENST00000539232 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
LMO3-220ENST00000539232 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
LMO3-220ENST00000539232 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
LMO3-220ENST00000539232 HRES1P13985 223 aa3.88□□□□□ -1.79
LMO3-220ENST00000539232 ACYP2P14621 99 aa3.88□□□□□ -1.79
LMO3-220ENST00000539232 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
LMO3-220ENST00000539232 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
LMO3-220ENST00000539232 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
LMO3-220ENST00000539232 MT1HP80294 61 aa3.86□□□□□ -1.79
LMO3-220ENST00000539232 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
LMO3-220ENST00000539232 UQCR11O14957 56 aa3.84□□□□□ -1.79
LMO3-220ENST00000539232 USH2AO75445 5202 aa3.83□□□□□ -1.8
LMO3-220ENST00000539232 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
LMO3-220ENST00000539232 Q96NJ1 140 aa3.83□□□□□ -1.8
LMO3-220ENST00000539232 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
LMO3-220ENST00000539232 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
LMO3-220ENST00000539232 A0A1B0GU69 56 aa3.81□□□□□ -1.8
LMO3-220ENST00000539232 MRPL34Q9BQ48 92 aaKnown RBP3.81□□□□□ -1.8
LMO3-220ENST00000539232 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
LMO3-220ENST00000539232 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
LMO3-220ENST00000539232 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
LMO3-220ENST00000539232 DMAC1Q96GE9 116 aa3.8□□□□□ -1.8
LMO3-220ENST00000539232 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
LMO3-220ENST00000539232 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
LMO3-220ENST00000539232 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
LMO3-220ENST00000539232 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
LMO3-220ENST00000539232 IGHV6-1A0A0B4J1U7 121 aa3.76□□□□□ -1.81
LMO3-220ENST00000539232 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
LMO3-220ENST00000539232 M0R2T5 61 aa3.75□□□□□ -1.81
LMO3-220ENST00000539232 A8MUU9 505 aa3.74□□□□□ -1.81
LMO3-220ENST00000539232 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
LMO3-220ENST00000539232 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
LMO3-220ENST00000539232 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
LMO3-220ENST00000539232 NEBP20929 6669 aa3.71□□□□□ -1.82
LMO3-220ENST00000539232 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
LMO3-220ENST00000539232 ROMO1P60602 79 aa3.7□□□□□ -1.82
LMO3-220ENST00000539232 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
LMO3-220ENST00000539232 COX6B2Q6YFQ2 88 aa3.68□□□□□ -1.82
LMO3-220ENST00000539232 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
LMO3-220ENST00000539232 Q5W150 140 aa3.65□□□□□ -1.83
LMO3-220ENST00000539232 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
LMO3-220ENST00000539232 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
LMO3-220ENST00000539232 K7ERS5 55 aa3.61□□□□□ -1.83
LMO3-220ENST00000539232 LCE2BO14633 110 aa3.58□□□□□ -1.84
LMO3-220ENST00000539232 MT2AP02795 61 aa3.58□□□□□ -1.84
LMO3-220ENST00000539232 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
LMO3-220ENST00000539232 MT1FP04733 61 aa3.56□□□□□ -1.84
LMO3-220ENST00000539232 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
LMO3-220ENST00000539232 A0A1B0GU33 70 aa3.53□□□□□ -1.84
LMO3-220ENST00000539232 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
LMO3-220ENST00000539232 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
LMO3-220ENST00000539232 H0YAA0 97 aa3.52□□□□□ -1.85
LMO3-220ENST00000539232 H1FX-AS1Q4G0G2 97 aa3.51□□□□□ -1.85
LMO3-220ENST00000539232 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
LMO3-220ENST00000539232 P0C880 135 aa3.5□□□□□ -1.85
LMO3-220ENST00000539232 KMT2DO14686 5537 aa3.49□□□□□ -1.85
LMO3-220ENST00000539232 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
LMO3-220ENST00000539232 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
LMO3-220ENST00000539232 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
LMO3-220ENST00000539232 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
LMO3-220ENST00000539232 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
LMO3-220ENST00000539232 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
LMO3-220ENST00000539232 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
LMO3-220ENST00000539232 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
LMO3-220ENST00000539232 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
LMO3-220ENST00000539232 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
LMO3-220ENST00000539232 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
LMO3-220ENST00000539232 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
LMO3-220ENST00000539232 S4R3F8 94 aa3.29□□□□□ -1.88
LMO3-220ENST00000539232 MT1BP07438 61 aa3.27□□□□□ -1.89
LMO3-220ENST00000539232 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
LMO3-220ENST00000539232 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
LMO3-220ENST00000539232 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
LMO3-220ENST00000539232 SPRR2EP22531 72 aa3.21□□□□□ -1.9
LMO3-220ENST00000539232 SPRR2BP35325 72 aa3.21□□□□□ -1.9
LMO3-220ENST00000539232 SPRR2AP35326 72 aa3.21□□□□□ -1.9
LMO3-220ENST00000539232 M0QZ58 72 aa3.18□□□□□ -1.9
LMO3-220ENST00000539232 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
LMO3-220ENST00000539232 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
LMO3-220ENST00000539232 A0A0D9SG42 100 aa3.16□□□□□ -1.9
LMO3-220ENST00000539232 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
LMO3-220ENST00000539232 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
LMO3-220ENST00000539232 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
LMO3-220ENST00000539232 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
LMO3-220ENST00000539232 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
LMO3-220ENST00000539232 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
LMO3-220ENST00000539232 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms