RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
CDH20-203ENST00000538374 H0YAA0 97 aa8.19□□□□□ -1.1
CDH20-203ENST00000538374 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
CDH20-203ENST00000538374 LPAP08519 4548 aa8.11□□□□□ -1.11
CDH20-203ENST00000538374 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
CDH20-203ENST00000538374 A0A1B0GU33 70 aa8.09□□□□□ -1.11
CDH20-203ENST00000538374 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
CDH20-203ENST00000538374 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
CDH20-203ENST00000538374 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
CDH20-203ENST00000538374 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
CDH20-203ENST00000538374 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
CDH20-203ENST00000538374 LRP2P98164 4655 aa7.97□□□□□ -1.13
CDH20-203ENST00000538374 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
CDH20-203ENST00000538374 A0A0D9SG42 100 aa7.9□□□□□ -1.14
CDH20-203ENST00000538374 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
CDH20-203ENST00000538374 XP32Q5T750 250 aa7.88□□□□□ -1.15
CDH20-203ENST00000538374 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
CDH20-203ENST00000538374 KRTAP10-6P60371 365 aaPredicted RBP7.86□□□□□ -1.15
CDH20-203ENST00000538374 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
CDH20-203ENST00000538374 H3BS24 57 aa7.85□□□□□ -1.15
CDH20-203ENST00000538374 HERC2O95714 4834 aa7.83□□□□□ -1.16
CDH20-203ENST00000538374 BIRC6Q9NR09 4857 aa7.83□□□□□ -1.16
CDH20-203ENST00000538374 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
CDH20-203ENST00000538374 P0C880 135 aa7.8□□□□□ -1.16
CDH20-203ENST00000538374 KRTAP25-1Q3LHN0 102 aa7.8□□□□□ -1.16
CDH20-203ENST00000538374 S4R3F8 94 aa7.76□□□□□ -1.17
CDH20-203ENST00000538374 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
CDH20-203ENST00000538374 K7ERS5 55 aa7.73□□□□□ -1.17
CDH20-203ENST00000538374 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.19
CDH20-203ENST00000538374 ROMO1P60602 79 aa7.64□□□□□ -1.19
CDH20-203ENST00000538374 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
CDH20-203ENST00000538374 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
CDH20-203ENST00000538374 J3QL48 77 aa7.56□□□□□ -1.2
CDH20-203ENST00000538374 MUC2Q02817 5179 aa7.51□□□□□ -1.21
CDH20-203ENST00000538374 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
CDH20-203ENST00000538374 PCLOQ9Y6V0 5065 aa7.48□□□□□ -1.21
CDH20-203ENST00000538374 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
CDH20-203ENST00000538374 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
CDH20-203ENST00000538374 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
CDH20-203ENST00000538374 HERC1Q15751 4861 aa7.35□□□□□ -1.23
CDH20-203ENST00000538374 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
CDH20-203ENST00000538374 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
CDH20-203ENST00000538374 M0QZ58 72 aa7.33□□□□□ -1.24
CDH20-203ENST00000538374 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
CDH20-203ENST00000538374 R4GN34 69 aa7.25□□□□□ -1.25
CDH20-203ENST00000538374 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
CDH20-203ENST00000538374 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
CDH20-203ENST00000538374 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
CDH20-203ENST00000538374 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
CDH20-203ENST00000538374 LCE2CQ5TA81 110 aa7□□□□□ -1.29
CDH20-203ENST00000538374 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
CDH20-203ENST00000538374 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
CDH20-203ENST00000538374 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
CDH20-203ENST00000538374 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
CDH20-203ENST00000538374 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
CDH20-203ENST00000538374 MT1HP80294 61 aa6.79□□□□□ -1.32
CDH20-203ENST00000538374 M0R2T5 61 aa6.6□□□□□ -1.35
CDH20-203ENST00000538374 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
CDH20-203ENST00000538374 MT2AP02795 61 aa6.59□□□□□ -1.35
CDH20-203ENST00000538374 MT1FP04733 61 aa6.57□□□□□ -1.36
CDH20-203ENST00000538374 TNP1P09430 55 aa6.57□□□□□ -1.36
CDH20-203ENST00000538374 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
CDH20-203ENST00000538374 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
CDH20-203ENST00000538374 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
CDH20-203ENST00000538374 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
CDH20-203ENST00000538374 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
CDH20-203ENST00000538374 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
CDH20-203ENST00000538374 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
CDH20-203ENST00000538374 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
CDH20-203ENST00000538374 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
CDH20-203ENST00000538374 MT1BP07438 61 aa6.29□□□□□ -1.4
CDH20-203ENST00000538374 USH2AO75445 5202 aa6.27□□□□□ -1.41
CDH20-203ENST00000538374 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
CDH20-203ENST00000538374 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CDH20-203ENST00000538374 KMT2DO14686 5537 aa6.2□□□□□ -1.42
CDH20-203ENST00000538374 KRTAP10-5P60370 271 aa6.15□□□□□ -1.43
CDH20-203ENST00000538374 LCE2BO14633 110 aa6.14□□□□□ -1.43
CDH20-203ENST00000538374 MT1XP80297 61 aa6.14□□□□□ -1.43
CDH20-203ENST00000538374 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
CDH20-203ENST00000538374 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.44
CDH20-203ENST00000538374 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
CDH20-203ENST00000538374 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
CDH20-203ENST00000538374 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
CDH20-203ENST00000538374 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
CDH20-203ENST00000538374 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
CDH20-203ENST00000538374 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
CDH20-203ENST00000538374 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
CDH20-203ENST00000538374 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
CDH20-203ENST00000538374 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
CDH20-203ENST00000538374 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
CDH20-203ENST00000538374 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
CDH20-203ENST00000538374 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
CDH20-203ENST00000538374 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
CDH20-203ENST00000538374 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
CDH20-203ENST00000538374 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
CDH20-203ENST00000538374 INE1O15225 51 aa5.41□□□□□ -1.54
CDH20-203ENST00000538374 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
CDH20-203ENST00000538374 MT1EP04732 61 aa5.35□□□□□ -1.55
CDH20-203ENST00000538374 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
CDH20-203ENST00000538374 MT1LQ93083 61 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms