RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
SLC28A1-204ENST00000538177 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
SLC28A1-204ENST00000538177 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
SLC28A1-204ENST00000538177 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
SLC28A1-204ENST00000538177 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
SLC28A1-204ENST00000538177 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
SLC28A1-204ENST00000538177 A0A1B0GU33 70 aa5.8□□□□□ -1.48
SLC28A1-204ENST00000538177 H1FX-AS1Q4G0G2 97 aa5.79□□□□□ -1.48
SLC28A1-204ENST00000538177 H0YAA0 97 aa5.78□□□□□ -1.48
SLC28A1-204ENST00000538177 S4R3F8 94 aa5.77□□□□□ -1.49
SLC28A1-204ENST00000538177 LRP2P98164 4655 aa5.77□□□□□ -1.49
SLC28A1-204ENST00000538177 HERC2O95714 4834 aa5.74□□□□□ -1.49
SLC28A1-204ENST00000538177 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SLC28A1-204ENST00000538177 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
SLC28A1-204ENST00000538177 KRTAP3-2Q9BYR7 98 aa5.7□□□□□ -1.5
SLC28A1-204ENST00000538177 LPAP08519 4548 aa5.7□□□□□ -1.5
SLC28A1-204ENST00000538177 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
SLC28A1-204ENST00000538177 J3QL48 77 aa5.65□□□□□ -1.5
SLC28A1-204ENST00000538177 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
SLC28A1-204ENST00000538177 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
SLC28A1-204ENST00000538177 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
SLC28A1-204ENST00000538177 P0C880 135 aa5.6□□□□□ -1.51
SLC28A1-204ENST00000538177 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
SLC28A1-204ENST00000538177 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
SLC28A1-204ENST00000538177 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
SLC28A1-204ENST00000538177 K7ERS5 55 aa5.56□□□□□ -1.52
SLC28A1-204ENST00000538177 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
SLC28A1-204ENST00000538177 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
SLC28A1-204ENST00000538177 A0A0D9SG42 100 aa5.51□□□□□ -1.53
SLC28A1-204ENST00000538177 M0QZ58 72 aa5.47□□□□□ -1.53
SLC28A1-204ENST00000538177 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
SLC28A1-204ENST00000538177 HERC1Q15751 4861 aa5.42□□□□□ -1.54
SLC28A1-204ENST00000538177 ROMO1P60602 79 aa5.42□□□□□ -1.54
SLC28A1-204ENST00000538177 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
SLC28A1-204ENST00000538177 KRTAP12-2P59991 146 aa5.4□□□□□ -1.55
SLC28A1-204ENST00000538177 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
SLC28A1-204ENST00000538177 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
SLC28A1-204ENST00000538177 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
SLC28A1-204ENST00000538177 R4GN34 69 aa5.33□□□□□ -1.56
SLC28A1-204ENST00000538177 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
SLC28A1-204ENST00000538177 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
SLC28A1-204ENST00000538177 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
SLC28A1-204ENST00000538177 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
SLC28A1-204ENST00000538177 MUC2Q02817 5179 aa5.26□□□□□ -1.57
SLC28A1-204ENST00000538177 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
SLC28A1-204ENST00000538177 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
SLC28A1-204ENST00000538177 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
SLC28A1-204ENST00000538177 RNF213Q63HN8 5207 aa5.06□□□□□ -1.6
SLC28A1-204ENST00000538177 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
SLC28A1-204ENST00000538177 MT1HP80294 61 aa5.05□□□□□ -1.6
SLC28A1-204ENST00000538177 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
SLC28A1-204ENST00000538177 M0R2T5 61 aa5□□□□□ -1.61
SLC28A1-204ENST00000538177 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
SLC28A1-204ENST00000538177 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
SLC28A1-204ENST00000538177 H3BS24 57 aa4.93□□□□□ -1.62
SLC28A1-204ENST00000538177 MT2AP02795 61 aa4.92□□□□□ -1.62
SLC28A1-204ENST00000538177 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
SLC28A1-204ENST00000538177 MT1FP04733 61 aa4.91□□□□□ -1.62
SLC28A1-204ENST00000538177 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
SLC28A1-204ENST00000538177 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
SLC28A1-204ENST00000538177 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
SLC28A1-204ENST00000538177 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
SLC28A1-204ENST00000538177 TNP1P09430 55 aa4.85□□□□□ -1.63
SLC28A1-204ENST00000538177 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
SLC28A1-204ENST00000538177 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
SLC28A1-204ENST00000538177 MT1BP07438 61 aa4.73□□□□□ -1.65
SLC28A1-204ENST00000538177 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
SLC28A1-204ENST00000538177 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
SLC28A1-204ENST00000538177 MT1XP80297 61 aa4.65□□□□□ -1.67
SLC28A1-204ENST00000538177 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
SLC28A1-204ENST00000538177 LCE2AQ5TA79 106 aaPredicted RBP4.61□□□□□ -1.67
SLC28A1-204ENST00000538177 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
SLC28A1-204ENST00000538177 LCE2BO14633 110 aa4.54□□□□□ -1.68
SLC28A1-204ENST00000538177 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
SLC28A1-204ENST00000538177 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
SLC28A1-204ENST00000538177 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SLC28A1-204ENST00000538177 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
SLC28A1-204ENST00000538177 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
SLC28A1-204ENST00000538177 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
SLC28A1-204ENST00000538177 A0A0A0MQY5 61 aa4.4□□□□□ -1.7
SLC28A1-204ENST00000538177 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
SLC28A1-204ENST00000538177 USH2AO75445 5202 aa4.35□□□□□ -1.71
SLC28A1-204ENST00000538177 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
SLC28A1-204ENST00000538177 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SLC28A1-204ENST00000538177 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SLC28A1-204ENST00000538177 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SLC28A1-204ENST00000538177 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
SLC28A1-204ENST00000538177 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
SLC28A1-204ENST00000538177 KMT2DO14686 5537 aa4.18□□□□□ -1.74
SLC28A1-204ENST00000538177 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
SLC28A1-204ENST00000538177 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
SLC28A1-204ENST00000538177 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
SLC28A1-204ENST00000538177 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
SLC28A1-204ENST00000538177 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
SLC28A1-204ENST00000538177 MT1EP04732 61 aa4.04□□□□□ -1.76
SLC28A1-204ENST00000538177 MT1LQ93083 61 aa4.02□□□□□ -1.77
SLC28A1-204ENST00000538177 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
SLC28A1-204ENST00000538177 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
SLC28A1-204ENST00000538177 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SLC28A1-204ENST00000538177 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms