RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 Q5W150 140 aa3.91□□□□□ -1.78
PTPRB-203ENST00000538174 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
PTPRB-203ENST00000538174 SRRM2Q9UQ35 2752 aaKnown RBP3.9□□□□□ -1.78
PTPRB-203ENST00000538174 IGLV7-43P04211 117 aa3.9□□□□□ -1.78
PTPRB-203ENST00000538174 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
PTPRB-203ENST00000538174 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.78
PTPRB-203ENST00000538174 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
PTPRB-203ENST00000538174 MRPL34Q9BQ48 92 aaKnown RBP3.9□□□□□ -1.79
PTPRB-203ENST00000538174 UQCR11O14957 56 aa3.89□□□□□ -1.79
PTPRB-203ENST00000538174 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
PTPRB-203ENST00000538174 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
PTPRB-203ENST00000538174 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
PTPRB-203ENST00000538174 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
PTPRB-203ENST00000538174 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
PTPRB-203ENST00000538174 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
PTPRB-203ENST00000538174 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
PTPRB-203ENST00000538174 A0A1B0GU33 70 aa3.81□□□□□ -1.8
PTPRB-203ENST00000538174 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
PTPRB-203ENST00000538174 SPINK6Q6UWN8 80 aa3.8□□□□□ -1.8
PTPRB-203ENST00000538174 SPINK1P00995 79 aa3.79□□□□□ -1.8
PTPRB-203ENST00000538174 A0A1B0GU69 56 aa3.79□□□□□ -1.8
PTPRB-203ENST00000538174 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
PTPRB-203ENST00000538174 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
PTPRB-203ENST00000538174 ACYP2P14621 99 aa3.78□□□□□ -1.8
PTPRB-203ENST00000538174 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
PTPRB-203ENST00000538174 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
PTPRB-203ENST00000538174 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
PTPRB-203ENST00000538174 HRES1P13985 223 aa3.74□□□□□ -1.81
PTPRB-203ENST00000538174 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
PTPRB-203ENST00000538174 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
PTPRB-203ENST00000538174 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
PTPRB-203ENST00000538174 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
PTPRB-203ENST00000538174 PCOTHQ58A44 107 aa3.68□□□□□ -1.82
PTPRB-203ENST00000538174 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
PTPRB-203ENST00000538174 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
PTPRB-203ENST00000538174 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
PTPRB-203ENST00000538174 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.82
PTPRB-203ENST00000538174 R4GN34 69 aa3.65□□□□□ -1.83
PTPRB-203ENST00000538174 CRIPTQ9P021 101 aa3.63□□□□□ -1.83
PTPRB-203ENST00000538174 TPRXLQ17RH7 258 aa3.61□□□□□ -1.83
PTPRB-203ENST00000538174 LRP2P98164 4655 aa3.6□□□□□ -1.83
PTPRB-203ENST00000538174 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
PTPRB-203ENST00000538174 LCE2CQ5TA81 110 aa3.56□□□□□ -1.84
PTPRB-203ENST00000538174 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
PTPRB-203ENST00000538174 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
PTPRB-203ENST00000538174 MUC2Q02817 5179 aa3.5□□□□□ -1.85
PTPRB-203ENST00000538174 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
PTPRB-203ENST00000538174 RPL37P61927 97 aaKnown RBP3.47□□□□□ -1.85
PTPRB-203ENST00000538174 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
PTPRB-203ENST00000538174 H0YAA0 97 aa3.43□□□□□ -1.86
PTPRB-203ENST00000538174 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
PTPRB-203ENST00000538174 XP32Q5T750 250 aa3.42□□□□□ -1.86
PTPRB-203ENST00000538174 LCE2BO14633 110 aa3.4□□□□□ -1.87
PTPRB-203ENST00000538174 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
PTPRB-203ENST00000538174 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
PTPRB-203ENST00000538174 PLAC4Q8WY50 150 aa3.39□□□□□ -1.87
PTPRB-203ENST00000538174 MT1HP80294 61 aa3.37□□□□□ -1.87
PTPRB-203ENST00000538174 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
PTPRB-203ENST00000538174 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
PTPRB-203ENST00000538174 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
PTPRB-203ENST00000538174 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
PTPRB-203ENST00000538174 LPAP08519 4548 aa3.35□□□□□ -1.87
PTPRB-203ENST00000538174 INE1O15225 51 aa3.35□□□□□ -1.87
PTPRB-203ENST00000538174 S4R3F8 94 aa3.32□□□□□ -1.88
PTPRB-203ENST00000538174 M0QZ58 72 aa3.3□□□□□ -1.88
PTPRB-203ENST00000538174 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
PTPRB-203ENST00000538174 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
PTPRB-203ENST00000538174 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
PTPRB-203ENST00000538174 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
PTPRB-203ENST00000538174 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
PTPRB-203ENST00000538174 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
PTPRB-203ENST00000538174 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
PTPRB-203ENST00000538174 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
PTPRB-203ENST00000538174 M0R2T5 61 aa3.13□□□□□ -1.91
PTPRB-203ENST00000538174 USH2AO75445 5202 aa3.13□□□□□ -1.91
PTPRB-203ENST00000538174 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
PTPRB-203ENST00000538174 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
PTPRB-203ENST00000538174 NEBP20929 6669 aa3.1□□□□□ -1.91
PTPRB-203ENST00000538174 KRTAP9-3Q9BYQ3 159 aa3.09□□□□□ -1.91
PTPRB-203ENST00000538174 A0A0D9SG42 100 aa3.09□□□□□ -1.91
PTPRB-203ENST00000538174 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
PTPRB-203ENST00000538174 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
PTPRB-203ENST00000538174 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
PTPRB-203ENST00000538174 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
PTPRB-203ENST00000538174 MT2AP02795 61 aa3.05□□□□□ -1.92
PTPRB-203ENST00000538174 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
PTPRB-203ENST00000538174 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
PTPRB-203ENST00000538174 MT1FP04733 61 aa2.96□□□□□ -1.93
PTPRB-203ENST00000538174 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
PTPRB-203ENST00000538174 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
PTPRB-203ENST00000538174 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
PTPRB-203ENST00000538174 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
PTPRB-203ENST00000538174 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
PTPRB-203ENST00000538174 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
PTPRB-203ENST00000538174 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
PTPRB-203ENST00000538174 TNP1P09430 55 aa2.87□□□□□ -1.95
PTPRB-203ENST00000538174 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
PTPRB-203ENST00000538174 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
PTPRB-203ENST00000538174 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
PTPRB-203ENST00000538174 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms