RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
MKS1-204ENST00000537529 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
MKS1-204ENST00000537529 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
MKS1-204ENST00000537529 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
MKS1-204ENST00000537529 S4R3F8 94 aa7.97□□□□□ -1.13
MKS1-204ENST00000537529 A0A1B0GU33 70 aa7.96□□□□□ -1.14
MKS1-204ENST00000537529 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
MKS1-204ENST00000537529 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
MKS1-204ENST00000537529 H0YAA0 97 aa7.9□□□□□ -1.15
MKS1-204ENST00000537529 J3QL48 77 aa7.89□□□□□ -1.15
MKS1-204ENST00000537529 RBM12B-AS1Q9P1G2 102 aa7.88□□□□□ -1.15
MKS1-204ENST00000537529 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
MKS1-204ENST00000537529 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
MKS1-204ENST00000537529 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
MKS1-204ENST00000537529 LRP2P98164 4655 aa7.74□□□□□ -1.17
MKS1-204ENST00000537529 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
MKS1-204ENST00000537529 LPAP08519 4548 aa7.69□□□□□ -1.18
MKS1-204ENST00000537529 ABCA13Q86UQ4 5058 aa7.69□□□□□ -1.18
MKS1-204ENST00000537529 K7ERS5 55 aa7.68□□□□□ -1.18
MKS1-204ENST00000537529 P0C880 135 aa7.67□□□□□ -1.18
MKS1-204ENST00000537529 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
MKS1-204ENST00000537529 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
MKS1-204ENST00000537529 HERC2O95714 4834 aa7.64□□□□□ -1.19
MKS1-204ENST00000537529 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
MKS1-204ENST00000537529 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
MKS1-204ENST00000537529 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
MKS1-204ENST00000537529 A0A0D9SG42 100 aa7.58□□□□□ -1.2
MKS1-204ENST00000537529 M0QZ58 72 aa7.51□□□□□ -1.21
MKS1-204ENST00000537529 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
MKS1-204ENST00000537529 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
MKS1-204ENST00000537529 ROMO1P60602 79 aa7.42□□□□□ -1.22
MKS1-204ENST00000537529 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
MKS1-204ENST00000537529 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
MKS1-204ENST00000537529 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
MKS1-204ENST00000537529 R4GN34 69 aa7.36□□□□□ -1.23
MKS1-204ENST00000537529 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
MKS1-204ENST00000537529 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
MKS1-204ENST00000537529 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
MKS1-204ENST00000537529 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
MKS1-204ENST00000537529 PCLOQ9Y6V0 5065 aa7.21□□□□□ -1.26
MKS1-204ENST00000537529 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
MKS1-204ENST00000537529 HERC1Q15751 4861 aa7.18□□□□□ -1.26
MKS1-204ENST00000537529 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
MKS1-204ENST00000537529 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
MKS1-204ENST00000537529 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
MKS1-204ENST00000537529 MUC2Q02817 5179 aa7.05□□□□□ -1.28
MKS1-204ENST00000537529 M0R2T5 61 aa6.97□□□□□ -1.29
MKS1-204ENST00000537529 MT1HP80294 61 aa6.96□□□□□ -1.29
MKS1-204ENST00000537529 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.29
MKS1-204ENST00000537529 H3BS24 57 aa6.86□□□□□ -1.31
MKS1-204ENST00000537529 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
MKS1-204ENST00000537529 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
MKS1-204ENST00000537529 MT2AP02795 61 aa6.79□□□□□ -1.32
MKS1-204ENST00000537529 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
MKS1-204ENST00000537529 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
MKS1-204ENST00000537529 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
MKS1-204ENST00000537529 MT1FP04733 61 aa6.77□□□□□ -1.33
MKS1-204ENST00000537529 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
MKS1-204ENST00000537529 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
MKS1-204ENST00000537529 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
MKS1-204ENST00000537529 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
MKS1-204ENST00000537529 TNP1P09430 55 aa6.68□□□□□ -1.34
MKS1-204ENST00000537529 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
MKS1-204ENST00000537529 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
MKS1-204ENST00000537529 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
MKS1-204ENST00000537529 MT1BP07438 61 aa6.49□□□□□ -1.37
MKS1-204ENST00000537529 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
MKS1-204ENST00000537529 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
MKS1-204ENST00000537529 MT1XP80297 61 aa6.38□□□□□ -1.39
MKS1-204ENST00000537529 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
MKS1-204ENST00000537529 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
MKS1-204ENST00000537529 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
MKS1-204ENST00000537529 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
MKS1-204ENST00000537529 LCE2BO14633 110 aa6.24□□□□□ -1.41
MKS1-204ENST00000537529 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
MKS1-204ENST00000537529 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
MKS1-204ENST00000537529 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.42
MKS1-204ENST00000537529 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
MKS1-204ENST00000537529 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
MKS1-204ENST00000537529 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
MKS1-204ENST00000537529 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
MKS1-204ENST00000537529 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
MKS1-204ENST00000537529 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
MKS1-204ENST00000537529 USH2AO75445 5202 aa5.86□□□□□ -1.47
MKS1-204ENST00000537529 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
MKS1-204ENST00000537529 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
MKS1-204ENST00000537529 KRTAP19-6Q3LI70 58 aa5.76□□□□□ -1.49
MKS1-204ENST00000537529 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
MKS1-204ENST00000537529 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
MKS1-204ENST00000537529 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
MKS1-204ENST00000537529 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
MKS1-204ENST00000537529 KMT2DO14686 5537 aa5.57□□□□□ -1.52
MKS1-204ENST00000537529 MT1EP04732 61 aa5.56□□□□□ -1.52
MKS1-204ENST00000537529 MT1LQ93083 61 aa5.52□□□□□ -1.53
MKS1-204ENST00000537529 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
MKS1-204ENST00000537529 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
MKS1-204ENST00000537529 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
MKS1-204ENST00000537529 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
MKS1-204ENST00000537529 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
MKS1-204ENST00000537529 MT1GP13640 62 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms