RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 CCKP06307 115 aa6.85□□□□□ -1.31
LPCAT3-206ENST00000537179 WFDC13Q8IUB5 93 aa6.85□□□□□ -1.31
LPCAT3-206ENST00000537179 LINC00575Q6W349 94 aa6.84□□□□□ -1.31
LPCAT3-206ENST00000537179 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
LPCAT3-206ENST00000537179 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
LPCAT3-206ENST00000537179 LCE1AQ5T7P2 110 aa6.82□□□□□ -1.32
LPCAT3-206ENST00000537179 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
LPCAT3-206ENST00000537179 SPRR2DP22532 72 aa6.78□□□□□ -1.32
LPCAT3-206ENST00000537179 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-206ENST00000537179 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
LPCAT3-206ENST00000537179 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
LPCAT3-206ENST00000537179 NDUFS5O43920 106 aa6.76□□□□□ -1.33
LPCAT3-206ENST00000537179 DNAL4O96015 105 aa6.76□□□□□ -1.33
LPCAT3-206ENST00000537179 IGKV4-1P06312 121 aa6.76□□□□□ -1.33
LPCAT3-206ENST00000537179 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
LPCAT3-206ENST00000537179 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.75□□□□□ -1.33
LPCAT3-206ENST00000537179 Q1T7F1 81 aa6.74□□□□□ -1.33
LPCAT3-206ENST00000537179 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
LPCAT3-206ENST00000537179 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
LPCAT3-206ENST00000537179 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
LPCAT3-206ENST00000537179 IGHV6-1A0A0B4J1U7 121 aa6.71□□□□□ -1.34
LPCAT3-206ENST00000537179 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
LPCAT3-206ENST00000537179 A0A087WVE0 104 aa6.68□□□□□ -1.34
LPCAT3-206ENST00000537179 H0YGX0 51 aa6.66□□□□□ -1.34
LPCAT3-206ENST00000537179 DEFB116Q30KQ4 102 aa6.66□□□□□ -1.34
LPCAT3-206ENST00000537179 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.34
LPCAT3-206ENST00000537179 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
LPCAT3-206ENST00000537179 Q6ZVQ6 151 aa6.64□□□□□ -1.35
LPCAT3-206ENST00000537179 TRBV7-4A0A0J9YYF1 115 aa6.61□□□□□ -1.35
LPCAT3-206ENST00000537179 C8orf87E5RJ46 101 aa6.61□□□□□ -1.35
LPCAT3-206ENST00000537179 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
LPCAT3-206ENST00000537179 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
LPCAT3-206ENST00000537179 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
LPCAT3-206ENST00000537179 LINC00472Q9H8W2 130 aa6.6□□□□□ -1.35
LPCAT3-206ENST00000537179 CXCL6P80162 114 aa6.59□□□□□ -1.35
LPCAT3-206ENST00000537179 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-206ENST00000537179 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
LPCAT3-206ENST00000537179 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
LPCAT3-206ENST00000537179 H3BS24 57 aa6.57□□□□□ -1.36
LPCAT3-206ENST00000537179 LCA10Q71F78 164 aa6.57□□□□□ -1.36
LPCAT3-206ENST00000537179 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
LPCAT3-206ENST00000537179 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
LPCAT3-206ENST00000537179 SNURFQ9Y675 71 aa6.54□□□□□ -1.36
LPCAT3-206ENST00000537179 H3BQ85 93 aa6.53□□□□□ -1.36
LPCAT3-206ENST00000537179 PDE6GP18545 87 aa6.53□□□□□ -1.36
LPCAT3-206ENST00000537179 ORMDL1Q9P0S3 153 aa6.53□□□□□ -1.36
LPCAT3-206ENST00000537179 TMEM256-PLSCR3K7ERE1 68 aa6.52□□□□□ -1.37
LPCAT3-206ENST00000537179 CYP4F30PQ9H0H9 118 aa6.52□□□□□ -1.37
LPCAT3-206ENST00000537179 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
LPCAT3-206ENST00000537179 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
LPCAT3-206ENST00000537179 NREPQ16612 68 aa6.49□□□□□ -1.37
LPCAT3-206ENST00000537179 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
LPCAT3-206ENST00000537179 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
LPCAT3-206ENST00000537179 A8MUN3 132 aa6.44□□□□□ -1.38
LPCAT3-206ENST00000537179 Q6ZQT0 140 aa6.42□□□□□ -1.38
LPCAT3-206ENST00000537179 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
LPCAT3-206ENST00000537179 BPY2O14599 106 aa6.41□□□□□ -1.38
LPCAT3-206ENST00000537179 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
LPCAT3-206ENST00000537179 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
LPCAT3-206ENST00000537179 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
LPCAT3-206ENST00000537179 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
LPCAT3-206ENST00000537179 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
LPCAT3-206ENST00000537179 NDUFB1O75438 58 aa6.36□□□□□ -1.39
LPCAT3-206ENST00000537179 PSPHP1O15172 72 aa6.35□□□□□ -1.39
LPCAT3-206ENST00000537179 MT1XP80297 61 aa6.35□□□□□ -1.39
LPCAT3-206ENST00000537179 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
LPCAT3-206ENST00000537179 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
LPCAT3-206ENST00000537179 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
LPCAT3-206ENST00000537179 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
LPCAT3-206ENST00000537179 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
LPCAT3-206ENST00000537179 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
LPCAT3-206ENST00000537179 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
LPCAT3-206ENST00000537179 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
LPCAT3-206ENST00000537179 A0A1B0GW54 56 aa6.29□□□□□ -1.4
LPCAT3-206ENST00000537179 MP68P56378 58 aa6.29□□□□□ -1.4
LPCAT3-206ENST00000537179 SPANXA2-OT1Q8N9U9 137 aa6.29□□□□□ -1.4
LPCAT3-206ENST00000537179 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
LPCAT3-206ENST00000537179 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
LPCAT3-206ENST00000537179 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
LPCAT3-206ENST00000537179 S4R3F8 94 aa6.27□□□□□ -1.41
LPCAT3-206ENST00000537179 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
LPCAT3-206ENST00000537179 H3BPC8 53 aa6.23□□□□□ -1.41
LPCAT3-206ENST00000537179 A6NED7 52 aa6.22□□□□□ -1.41
LPCAT3-206ENST00000537179 A8MU10 97 aa6.2□□□□□ -1.42
LPCAT3-206ENST00000537179 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
LPCAT3-206ENST00000537179 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
LPCAT3-206ENST00000537179 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
LPCAT3-206ENST00000537179 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
LPCAT3-206ENST00000537179 KRTAP5-10Q6L8G5 202 aa6.18□□□□□ -1.42
LPCAT3-206ENST00000537179 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
LPCAT3-206ENST00000537179 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-206ENST00000537179 Q5W150 140 aa6.14□□□□□ -1.43
LPCAT3-206ENST00000537179 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
LPCAT3-206ENST00000537179 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
LPCAT3-206ENST00000537179 K7EQZ3 153 aa6.04□□□□□ -1.44
LPCAT3-206ENST00000537179 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
LPCAT3-206ENST00000537179 KRTAP5-7Q6L8G8 165 aa6.04□□□□□ -1.44
LPCAT3-206ENST00000537179 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
LPCAT3-206ENST00000537179 MT4P47944 62 aa6.01□□□□□ -1.45
LPCAT3-206ENST00000537179 KRTAP10-12P60413 245 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms