RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.87
CHD4-206ENST00000536999 FAT1Q14517 4588 aa3.4□□□□□ -1.87
CHD4-206ENST00000536999 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.87
CHD4-206ENST00000536999 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
CHD4-206ENST00000536999 CIRBP-AS1Q8TBR5 109 aa3.4□□□□□ -1.87
CHD4-206ENST00000536999 VPS13BQ7Z7G8 4022 aa3.4□□□□□ -1.87
CHD4-206ENST00000536999 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
CHD4-206ENST00000536999 A8MU10 97 aa3.39□□□□□ -1.87
CHD4-206ENST00000536999 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
CHD4-206ENST00000536999 SPINK1P00995 79 aa3.38□□□□□ -1.87
CHD4-206ENST00000536999 SMR3BP02814 79 aaPredicted RBP3.35□□□□□ -1.87
CHD4-206ENST00000536999 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
CHD4-206ENST00000536999 MUC2Q02817 5179 aa3.34□□□□□ -1.88
CHD4-206ENST00000536999 LRP2P98164 4655 aa3.33□□□□□ -1.88
CHD4-206ENST00000536999 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
CHD4-206ENST00000536999 PANO1I0J062 215 aa3.32□□□□□ -1.88
CHD4-206ENST00000536999 ANAPC11Q9NYG5 84 aa3.32□□□□□ -1.88
CHD4-206ENST00000536999 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
CHD4-206ENST00000536999 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
CHD4-206ENST00000536999 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
CHD4-206ENST00000536999 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
CHD4-206ENST00000536999 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
CHD4-206ENST00000536999 A0A1B0GU33 70 aa3.29□□□□□ -1.88
CHD4-206ENST00000536999 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
CHD4-206ENST00000536999 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
CHD4-206ENST00000536999 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
CHD4-206ENST00000536999 TYMSOSQ8TAI1 123 aa3.28□□□□□ -1.88
CHD4-206ENST00000536999 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
CHD4-206ENST00000536999 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
CHD4-206ENST00000536999 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
CHD4-206ENST00000536999 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
CHD4-206ENST00000536999 A8MUU9 505 aa3.25□□□□□ -1.89
CHD4-206ENST00000536999 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
CHD4-206ENST00000536999 Q6ZSA8 131 aa3.25□□□□□ -1.89
CHD4-206ENST00000536999 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
CHD4-206ENST00000536999 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CHD4-206ENST00000536999 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
CHD4-206ENST00000536999 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
CHD4-206ENST00000536999 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
CHD4-206ENST00000536999 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
CHD4-206ENST00000536999 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
CHD4-206ENST00000536999 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
CHD4-206ENST00000536999 ROMO1P60602 79 aa3.21□□□□□ -1.9
CHD4-206ENST00000536999 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
CHD4-206ENST00000536999 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
CHD4-206ENST00000536999 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
CHD4-206ENST00000536999 TNXBP22105 4242 aa3.18□□□□□ -1.9
CHD4-206ENST00000536999 H0YAA0 97 aa3.18□□□□□ -1.9
CHD4-206ENST00000536999 RPL37P61927 97 aaKnown RBP3.18□□□□□ -1.9
CHD4-206ENST00000536999 MT1HL1P0DM35 61 aa3.14□□□□□ -1.91
CHD4-206ENST00000536999 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
CHD4-206ENST00000536999 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CHD4-206ENST00000536999 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
CHD4-206ENST00000536999 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CHD4-206ENST00000536999 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
CHD4-206ENST00000536999 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
CHD4-206ENST00000536999 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
CHD4-206ENST00000536999 M0QZ58 72 aa3.08□□□□□ -1.92
CHD4-206ENST00000536999 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
CHD4-206ENST00000536999 LPAP08519 4548 aa3.07□□□□□ -1.92
CHD4-206ENST00000536999 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
CHD4-206ENST00000536999 S4R3F8 94 aa3.06□□□□□ -1.92
CHD4-206ENST00000536999 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
CHD4-206ENST00000536999 KRTAP10-6P60371 365 aaPredicted RBP2.99□□□□□ -1.93
CHD4-206ENST00000536999 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
CHD4-206ENST00000536999 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
CHD4-206ENST00000536999 A0A0D9SG42 100 aa2.95□□□□□ -1.94
CHD4-206ENST00000536999 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
CHD4-206ENST00000536999 P0C880 135 aa2.95□□□□□ -1.94
CHD4-206ENST00000536999 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
CHD4-206ENST00000536999 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
CHD4-206ENST00000536999 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
CHD4-206ENST00000536999 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
CHD4-206ENST00000536999 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
CHD4-206ENST00000536999 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
CHD4-206ENST00000536999 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
CHD4-206ENST00000536999 R4GN34 69 aa2.87□□□□□ -1.95
CHD4-206ENST00000536999 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
CHD4-206ENST00000536999 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
CHD4-206ENST00000536999 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
CHD4-206ENST00000536999 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
CHD4-206ENST00000536999 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
CHD4-206ENST00000536999 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CHD4-206ENST00000536999 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
CHD4-206ENST00000536999 NEBP20929 6669 aa2.8□□□□□ -1.96
CHD4-206ENST00000536999 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
CHD4-206ENST00000536999 USH2AO75445 5202 aa2.79□□□□□ -1.96
CHD4-206ENST00000536999 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
CHD4-206ENST00000536999 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
CHD4-206ENST00000536999 TNP1P09430 55 aa2.73□□□□□ -1.97
CHD4-206ENST00000536999 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
CHD4-206ENST00000536999 M0R2T5 61 aa2.72□□□□□ -1.97
CHD4-206ENST00000536999 MT1HP80294 61 aa2.72□□□□□ -1.97
CHD4-206ENST00000536999 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
CHD4-206ENST00000536999 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
CHD4-206ENST00000536999 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
CHD4-206ENST00000536999 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
CHD4-206ENST00000536999 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CHD4-206ENST00000536999 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
CHD4-206ENST00000536999 INE1O15225 51 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms