RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TNXBP22105 4242 aa7.16□□□□□ -1.26
SMG6-203ENST00000536871 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.27
SMG6-203ENST00000536871 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
SMG6-203ENST00000536871 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
SMG6-203ENST00000536871 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
SMG6-203ENST00000536871 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
SMG6-203ENST00000536871 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
SMG6-203ENST00000536871 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
SMG6-203ENST00000536871 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
SMG6-203ENST00000536871 ROMO1P60602 79 aa7.02□□□□□ -1.29
SMG6-203ENST00000536871 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
SMG6-203ENST00000536871 S4R3F8 94 aa6.92□□□□□ -1.3
SMG6-203ENST00000536871 J3QL48 77 aa6.92□□□□□ -1.3
SMG6-203ENST00000536871 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
SMG6-203ENST00000536871 KRTAP4-5Q9BYR2 181 aa6.92□□□□□ -1.3
SMG6-203ENST00000536871 A0A1B0GU33 70 aa6.9□□□□□ -1.3
SMG6-203ENST00000536871 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.31
SMG6-203ENST00000536871 MYCBP2O75592 4640 aa6.88□□□□□ -1.31
SMG6-203ENST00000536871 H0YAA0 97 aa6.87□□□□□ -1.31
SMG6-203ENST00000536871 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
SMG6-203ENST00000536871 K7ERS5 55 aa6.83□□□□□ -1.32
SMG6-203ENST00000536871 HERC2O95714 4834 aa6.82□□□□□ -1.32
SMG6-203ENST00000536871 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
SMG6-203ENST00000536871 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
SMG6-203ENST00000536871 P0C880 135 aa6.72□□□□□ -1.33
SMG6-203ENST00000536871 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
SMG6-203ENST00000536871 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
SMG6-203ENST00000536871 LRP2P98164 4655 aa6.65□□□□□ -1.35
SMG6-203ENST00000536871 M0QZ58 72 aa6.6□□□□□ -1.35
SMG6-203ENST00000536871 LPAP08519 4548 aa6.56□□□□□ -1.36
SMG6-203ENST00000536871 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
SMG6-203ENST00000536871 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
SMG6-203ENST00000536871 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
SMG6-203ENST00000536871 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
SMG6-203ENST00000536871 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
SMG6-203ENST00000536871 A0A0D9SG42 100 aa6.48□□□□□ -1.37
SMG6-203ENST00000536871 CRIPTQ9P021 101 aa6.47□□□□□ -1.37
SMG6-203ENST00000536871 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
SMG6-203ENST00000536871 HERC1Q15751 4861 aa6.43□□□□□ -1.38
SMG6-203ENST00000536871 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
SMG6-203ENST00000536871 R4GN34 69 aa6.41□□□□□ -1.38
SMG6-203ENST00000536871 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
SMG6-203ENST00000536871 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
SMG6-203ENST00000536871 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
SMG6-203ENST00000536871 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
SMG6-203ENST00000536871 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
SMG6-203ENST00000536871 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
SMG6-203ENST00000536871 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
SMG6-203ENST00000536871 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
SMG6-203ENST00000536871 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
SMG6-203ENST00000536871 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.43
SMG6-203ENST00000536871 M0R2T5 61 aa6.07□□□□□ -1.44
SMG6-203ENST00000536871 MT1HP80294 61 aa6.05□□□□□ -1.44
SMG6-203ENST00000536871 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
SMG6-203ENST00000536871 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
SMG6-203ENST00000536871 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
SMG6-203ENST00000536871 MUC2Q02817 5179 aa5.99□□□□□ -1.45
SMG6-203ENST00000536871 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
SMG6-203ENST00000536871 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
SMG6-203ENST00000536871 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
SMG6-203ENST00000536871 MT2AP02795 61 aa5.88□□□□□ -1.47
SMG6-203ENST00000536871 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
SMG6-203ENST00000536871 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SMG6-203ENST00000536871 TNP1P09430 55 aa5.85□□□□□ -1.47
SMG6-203ENST00000536871 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
SMG6-203ENST00000536871 MT1FP04733 61 aa5.84□□□□□ -1.47
SMG6-203ENST00000536871 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
SMG6-203ENST00000536871 FAT4Q6V0I7 4981 aa5.78□□□□□ -1.48
SMG6-203ENST00000536871 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
SMG6-203ENST00000536871 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
SMG6-203ENST00000536871 MT1BP07438 61 aa5.62□□□□□ -1.51
SMG6-203ENST00000536871 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
SMG6-203ENST00000536871 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
SMG6-203ENST00000536871 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
SMG6-203ENST00000536871 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
SMG6-203ENST00000536871 MT1XP80297 61 aa5.51□□□□□ -1.53
SMG6-203ENST00000536871 INE1O15225 51 aa5.43□□□□□ -1.54
SMG6-203ENST00000536871 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
SMG6-203ENST00000536871 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
SMG6-203ENST00000536871 LCE2BO14633 110 aa5.39□□□□□ -1.55
SMG6-203ENST00000536871 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
SMG6-203ENST00000536871 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
SMG6-203ENST00000536871 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
SMG6-203ENST00000536871 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
SMG6-203ENST00000536871 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
SMG6-203ENST00000536871 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
SMG6-203ENST00000536871 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
SMG6-203ENST00000536871 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
SMG6-203ENST00000536871 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
SMG6-203ENST00000536871 USH2AO75445 5202 aa4.98□□□□□ -1.61
SMG6-203ENST00000536871 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
SMG6-203ENST00000536871 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
SMG6-203ENST00000536871 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SMG6-203ENST00000536871 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
SMG6-203ENST00000536871 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.62
SMG6-203ENST00000536871 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SMG6-203ENST00000536871 MT1EP04732 61 aa4.83□□□□□ -1.64
SMG6-203ENST00000536871 MT1LQ93083 61 aa4.78□□□□□ -1.64
SMG6-203ENST00000536871 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
SMG6-203ENST00000536871 KMT2DO14686 5537 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms