RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
COL21A1-212ENST00000535941 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
COL21A1-212ENST00000535941 P0C880 135 aa4.4□□□□□ -1.7
COL21A1-212ENST00000535941 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
COL21A1-212ENST00000535941 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
COL21A1-212ENST00000535941 Q5W150 140 aa4.39□□□□□ -1.71
COL21A1-212ENST00000535941 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
COL21A1-212ENST00000535941 A8MUU9 505 aa4.38□□□□□ -1.71
COL21A1-212ENST00000535941 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
COL21A1-212ENST00000535941 DMBT1Q9UGM3 2413 aaPredicted RBP4.37□□□□□ -1.71
COL21A1-212ENST00000535941 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
COL21A1-212ENST00000535941 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
COL21A1-212ENST00000535941 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
COL21A1-212ENST00000535941 IGKV2-30P06310 120 aa4.31□□□□□ -1.72
COL21A1-212ENST00000535941 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
COL21A1-212ENST00000535941 XP32Q5T750 250 aa4.25□□□□□ -1.73
COL21A1-212ENST00000535941 LPAP08519 4548 aa4.25□□□□□ -1.73
COL21A1-212ENST00000535941 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
COL21A1-212ENST00000535941 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
COL21A1-212ENST00000535941 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
COL21A1-212ENST00000535941 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
COL21A1-212ENST00000535941 K7ERS5 55 aa4.22□□□□□ -1.73
COL21A1-212ENST00000535941 C9orf92A6NGG3 77 aa4.2□□□□□ -1.74
COL21A1-212ENST00000535941 LRP2P98164 4655 aa4.2□□□□□ -1.74
COL21A1-212ENST00000535941 H0YAA0 97 aa4.19□□□□□ -1.74
COL21A1-212ENST00000535941 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
COL21A1-212ENST00000535941 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
COL21A1-212ENST00000535941 A0A1B0GU33 70 aa4.17□□□□□ -1.74
COL21A1-212ENST00000535941 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
COL21A1-212ENST00000535941 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
COL21A1-212ENST00000535941 HERC1Q15751 4861 aa4.1□□□□□ -1.75
COL21A1-212ENST00000535941 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
COL21A1-212ENST00000535941 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
COL21A1-212ENST00000535941 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
COL21A1-212ENST00000535941 KRTAP3-3Q9BYR6 98 aa4.05□□□□□ -1.76
COL21A1-212ENST00000535941 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
COL21A1-212ENST00000535941 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
COL21A1-212ENST00000535941 A0A0D9SG42 100 aa3.99□□□□□ -1.77
COL21A1-212ENST00000535941 J3QL48 77 aa3.99□□□□□ -1.77
COL21A1-212ENST00000535941 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
COL21A1-212ENST00000535941 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
COL21A1-212ENST00000535941 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
COL21A1-212ENST00000535941 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
COL21A1-212ENST00000535941 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
COL21A1-212ENST00000535941 S4R3F8 94 aa3.89□□□□□ -1.79
COL21A1-212ENST00000535941 MUC2Q02817 5179 aa3.88□□□□□ -1.79
COL21A1-212ENST00000535941 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
COL21A1-212ENST00000535941 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
COL21A1-212ENST00000535941 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
COL21A1-212ENST00000535941 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
COL21A1-212ENST00000535941 MT1HP80294 61 aa3.74□□□□□ -1.81
COL21A1-212ENST00000535941 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
COL21A1-212ENST00000535941 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
COL21A1-212ENST00000535941 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
COL21A1-212ENST00000535941 M0QZ58 72 aa3.66□□□□□ -1.82
COL21A1-212ENST00000535941 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
COL21A1-212ENST00000535941 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
COL21A1-212ENST00000535941 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
COL21A1-212ENST00000535941 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
COL21A1-212ENST00000535941 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
COL21A1-212ENST00000535941 MT2AP02795 61 aa3.59□□□□□ -1.83
COL21A1-212ENST00000535941 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
COL21A1-212ENST00000535941 MT1FP04733 61 aa3.57□□□□□ -1.84
COL21A1-212ENST00000535941 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
COL21A1-212ENST00000535941 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
COL21A1-212ENST00000535941 R4GN34 69 aa3.51□□□□□ -1.85
COL21A1-212ENST00000535941 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
COL21A1-212ENST00000535941 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
COL21A1-212ENST00000535941 MT1BP07438 61 aa3.45□□□□□ -1.86
COL21A1-212ENST00000535941 M0R2T5 61 aa3.39□□□□□ -1.87
COL21A1-212ENST00000535941 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
COL21A1-212ENST00000535941 LCE2BO14633 110 aa3.38□□□□□ -1.87
COL21A1-212ENST00000535941 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
COL21A1-212ENST00000535941 MT1XP80297 61 aa3.34□□□□□ -1.87
COL21A1-212ENST00000535941 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
COL21A1-212ENST00000535941 USH2AO75445 5202 aa3.3□□□□□ -1.88
COL21A1-212ENST00000535941 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
COL21A1-212ENST00000535941 TNP1P09430 55 aa3.28□□□□□ -1.89
COL21A1-212ENST00000535941 INE1O15225 51 aa3.27□□□□□ -1.89
COL21A1-212ENST00000535941 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
COL21A1-212ENST00000535941 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
COL21A1-212ENST00000535941 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
COL21A1-212ENST00000535941 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
COL21A1-212ENST00000535941 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
COL21A1-212ENST00000535941 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
COL21A1-212ENST00000535941 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
COL21A1-212ENST00000535941 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
COL21A1-212ENST00000535941 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
COL21A1-212ENST00000535941 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
COL21A1-212ENST00000535941 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
COL21A1-212ENST00000535941 KMT2DO14686 5537 aa2.99□□□□□ -1.93
COL21A1-212ENST00000535941 KRTAP4-8A0A0G2JLE6 195 aa2.97□□□□□ -1.93
COL21A1-212ENST00000535941 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
COL21A1-212ENST00000535941 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
COL21A1-212ENST00000535941 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
COL21A1-212ENST00000535941 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
COL21A1-212ENST00000535941 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
COL21A1-212ENST00000535941 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
COL21A1-212ENST00000535941 MT1EP04732 61 aa2.92□□□□□ -1.94
COL21A1-212ENST00000535941 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms