RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
AC048338.1-201ENST00000535844 A0A1B0GU33 70 aa5.99□□□□□ -1.45
AC048338.1-201ENST00000535844 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
AC048338.1-201ENST00000535844 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
AC048338.1-201ENST00000535844 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
AC048338.1-201ENST00000535844 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
AC048338.1-201ENST00000535844 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
AC048338.1-201ENST00000535844 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
AC048338.1-201ENST00000535844 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
AC048338.1-201ENST00000535844 A0A1B0GVY2 172 aa5.9□□□□□ -1.46
AC048338.1-201ENST00000535844 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.47
AC048338.1-201ENST00000535844 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
AC048338.1-201ENST00000535844 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
AC048338.1-201ENST00000535844 HSPG2P98160 4391 aa5.88□□□□□ -1.47
AC048338.1-201ENST00000535844 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
AC048338.1-201ENST00000535844 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
AC048338.1-201ENST00000535844 COX6B2Q6YFQ2 88 aa5.83□□□□□ -1.48
AC048338.1-201ENST00000535844 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
AC048338.1-201ENST00000535844 RYR1P21817 5038 aa5.82□□□□□ -1.48
AC048338.1-201ENST00000535844 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
AC048338.1-201ENST00000535844 A0A0D9SG42 100 aa5.76□□□□□ -1.49
AC048338.1-201ENST00000535844 RPL37P61927 97 aaKnown RBP5.76□□□□□ -1.49
AC048338.1-201ENST00000535844 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
AC048338.1-201ENST00000535844 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
AC048338.1-201ENST00000535844 TNXBP22105 4242 aa5.72□□□□□ -1.49
AC048338.1-201ENST00000535844 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
AC048338.1-201ENST00000535844 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
AC048338.1-201ENST00000535844 HERC2O95714 4834 aa5.7□□□□□ -1.5
AC048338.1-201ENST00000535844 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
AC048338.1-201ENST00000535844 Q5VSD8 79 aa5.69□□□□□ -1.5
AC048338.1-201ENST00000535844 XP32Q5T750 250 aa5.68□□□□□ -1.5
AC048338.1-201ENST00000535844 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
AC048338.1-201ENST00000535844 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.51
AC048338.1-201ENST00000535844 S4R3F8 94 aa5.65□□□□□ -1.51
AC048338.1-201ENST00000535844 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.51
AC048338.1-201ENST00000535844 LPAP08519 4548 aa5.63□□□□□ -1.51
AC048338.1-201ENST00000535844 LRP2P98164 4655 aa5.57□□□□□ -1.52
AC048338.1-201ENST00000535844 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
AC048338.1-201ENST00000535844 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
AC048338.1-201ENST00000535844 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
AC048338.1-201ENST00000535844 HERC1Q15751 4861 aa5.49□□□□□ -1.53
AC048338.1-201ENST00000535844 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
AC048338.1-201ENST00000535844 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
AC048338.1-201ENST00000535844 M0QZ58 72 aa5.33□□□□□ -1.56
AC048338.1-201ENST00000535844 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
AC048338.1-201ENST00000535844 R4GN34 69 aa5.28□□□□□ -1.56
AC048338.1-201ENST00000535844 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
AC048338.1-201ENST00000535844 MUC2Q02817 5179 aa5.26□□□□□ -1.57
AC048338.1-201ENST00000535844 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
AC048338.1-201ENST00000535844 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
AC048338.1-201ENST00000535844 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
AC048338.1-201ENST00000535844 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
AC048338.1-201ENST00000535844 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
AC048338.1-201ENST00000535844 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
AC048338.1-201ENST00000535844 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
AC048338.1-201ENST00000535844 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
AC048338.1-201ENST00000535844 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
AC048338.1-201ENST00000535844 INE1O15225 51 aa5.01□□□□□ -1.61
AC048338.1-201ENST00000535844 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
AC048338.1-201ENST00000535844 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
AC048338.1-201ENST00000535844 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
AC048338.1-201ENST00000535844 TNP1P09430 55 aa4.8□□□□□ -1.64
AC048338.1-201ENST00000535844 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
AC048338.1-201ENST00000535844 M0R2T5 61 aa4.72□□□□□ -1.65
AC048338.1-201ENST00000535844 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
AC048338.1-201ENST00000535844 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
AC048338.1-201ENST00000535844 MT1HP80294 61 aa4.61□□□□□ -1.67
AC048338.1-201ENST00000535844 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
AC048338.1-201ENST00000535844 MT1FP04733 61 aa4.59□□□□□ -1.67
AC048338.1-201ENST00000535844 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
AC048338.1-201ENST00000535844 MT2AP02795 61 aa4.57□□□□□ -1.68
AC048338.1-201ENST00000535844 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
AC048338.1-201ENST00000535844 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
AC048338.1-201ENST00000535844 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
AC048338.1-201ENST00000535844 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
AC048338.1-201ENST00000535844 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
AC048338.1-201ENST00000535844 MT1BP07438 61 aa4.43□□□□□ -1.7
AC048338.1-201ENST00000535844 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
AC048338.1-201ENST00000535844 MT1XP80297 61 aa4.42□□□□□ -1.7
AC048338.1-201ENST00000535844 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
AC048338.1-201ENST00000535844 USH2AO75445 5202 aa4.42□□□□□ -1.7
AC048338.1-201ENST00000535844 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
AC048338.1-201ENST00000535844 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
AC048338.1-201ENST00000535844 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
AC048338.1-201ENST00000535844 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
AC048338.1-201ENST00000535844 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
AC048338.1-201ENST00000535844 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
AC048338.1-201ENST00000535844 KMT2DO14686 5537 aa4.23□□□□□ -1.73
AC048338.1-201ENST00000535844 LCE2BO14633 110 aa4.2□□□□□ -1.74
AC048338.1-201ENST00000535844 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
AC048338.1-201ENST00000535844 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
AC048338.1-201ENST00000535844 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
AC048338.1-201ENST00000535844 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
AC048338.1-201ENST00000535844 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
AC048338.1-201ENST00000535844 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
AC048338.1-201ENST00000535844 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
AC048338.1-201ENST00000535844 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
AC048338.1-201ENST00000535844 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
AC048338.1-201ENST00000535844 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
AC048338.1-201ENST00000535844 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms