RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 MP68P56378 58 aa9.74□□□□□ -0.85
PKP3-211ENST00000534401 A8MUN3 132 aa9.72□□□□□ -0.85
PKP3-211ENST00000534401 H3BPC8 53 aa9.72□□□□□ -0.85
PKP3-211ENST00000534401 IMUPQ9GZP8 106 aa9.72□□□□□ -0.85
PKP3-211ENST00000534401 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
PKP3-211ENST00000534401 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
PKP3-211ENST00000534401 K7ERU9 68 aa9.67□□□□□ -0.86
PKP3-211ENST00000534401 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
PKP3-211ENST00000534401 MACF1Q9UPN3 7388 aaKnown RBP9.64□□□□□ -0.87
PKP3-211ENST00000534401 MT-ATP8P03928 68 aa9.63□□□□□ -0.87
PKP3-211ENST00000534401 SCGB1A1P11684 91 aa9.63□□□□□ -0.87
PKP3-211ENST00000534401 NDUFC1O43677 76 aa9.61□□□□□ -0.87
PKP3-211ENST00000534401 H0YAA0 97 aa9.6□□□□□ -0.87
PKP3-211ENST00000534401 KRTAP19-8Q3LI54 63 aa9.6□□□□□ -0.87
PKP3-211ENST00000534401 SYNE2Q8WXH0 6885 aaKnown RBP9.6□□□□□ -0.87
PKP3-211ENST00000534401 MT1BP07438 61 aa9.56□□□□□ -0.88
PKP3-211ENST00000534401 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
PKP3-211ENST00000534401 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
PKP3-211ENST00000534401 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
PKP3-211ENST00000534401 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
PKP3-211ENST00000534401 Q5VV11 94 aa9.47□□□□□ -0.89
PKP3-211ENST00000534401 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
PKP3-211ENST00000534401 KRTAP10-5P60370 271 aa9.3□□□□□ -0.92
PKP3-211ENST00000534401 KRTAP6-3Q3LI67 103 aa9.3□□□□□ -0.92
PKP3-211ENST00000534401 A6NN06 94 aa9.28□□□□□ -0.92
PKP3-211ENST00000534401 ACYP2P14621 99 aa9.27□□□□□ -0.93
PKP3-211ENST00000534401 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
PKP3-211ENST00000534401 P0C880 135 aa9.24□□□□□ -0.93
PKP3-211ENST00000534401 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
PKP3-211ENST00000534401 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
PKP3-211ENST00000534401 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
PKP3-211ENST00000534401 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
PKP3-211ENST00000534401 R4GN34 69 aa9.12□□□□□ -0.95
PKP3-211ENST00000534401 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
PKP3-211ENST00000534401 NEBP20929 6669 aa9.09□□□□□ -0.95
PKP3-211ENST00000534401 M0QZ58 72 aa9.05□□□□□ -0.96
PKP3-211ENST00000534401 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
PKP3-211ENST00000534401 MT1XP80297 61 aa8.99□□□□□ -0.97
PKP3-211ENST00000534401 COX7CP15954 63 aa8.98□□□□□ -0.97
PKP3-211ENST00000534401 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
PKP3-211ENST00000534401 MUC12Q9UKN1 5478 aa8.96□□□□□ -0.97
PKP3-211ENST00000534401 PCP4P48539 62 aa8.96□□□□□ -0.98
PKP3-211ENST00000534401 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
PKP3-211ENST00000534401 KRTAP5-9P26371 169 aa8.85□□□□□ -0.99
PKP3-211ENST00000534401 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
PKP3-211ENST00000534401 H7BZZ5 65 aa8.84□□□□□ -0.99
PKP3-211ENST00000534401 KRTAP20-1Q3LI63 56 aa8.84□□□□□ -0.99
PKP3-211ENST00000534401 COA5Q86WW8 74 aa8.84□□□□□ -0.99
PKP3-211ENST00000534401 CYSTM1Q9H1C7 97 aa8.83□□□□□ -1
PKP3-211ENST00000534401 KRTAP12-2P59991 146 aa8.78□□□□□ -1
PKP3-211ENST00000534401 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
PKP3-211ENST00000534401 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
PKP3-211ENST00000534401 KMT2DO14686 5537 aa8.66□□□□□ -1.02
PKP3-211ENST00000534401 MDN1Q9NU22 5596 aa8.64□□□□□ -1.03
PKP3-211ENST00000534401 KRTAP10-12P60413 245 aa8.57□□□□□ -1.04
PKP3-211ENST00000534401 SEC61GP60059 68 aa8.56□□□□□ -1.04
PKP3-211ENST00000534401 KRTAP10-7P60409 375 aaPredicted RBP8.55□□□□□ -1.04
PKP3-211ENST00000534401 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
PKP3-211ENST00000534401 CCDC179H3BU77 68 aa8.54□□□□□ -1.04
PKP3-211ENST00000534401 KRTAP8-1Q8IUC2 63 aa8.53□□□□□ -1.04
PKP3-211ENST00000534401 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
PKP3-211ENST00000534401 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
PKP3-211ENST00000534401 SPRR2FQ96RM1 72 aa8.5□□□□□ -1.05
PKP3-211ENST00000534401 A0A1B0GU33 70 aa8.46□□□□□ -1.06
PKP3-211ENST00000534401 KRTAP2-3P0C7H8 128 aa8.46□□□□□ -1.06
PKP3-211ENST00000534401 KRTAP2-4Q9BYR9 128 aa8.46□□□□□ -1.06
PKP3-211ENST00000534401 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
PKP3-211ENST00000534401 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
PKP3-211ENST00000534401 CAMK2N1Q7Z7J9 78 aa8.36□□□□□ -1.07
PKP3-211ENST00000534401 A0A0D9SG42 100 aa8.35□□□□□ -1.07
PKP3-211ENST00000534401 A0A1B0GU69 56 aa8.34□□□□□ -1.07
PKP3-211ENST00000534401 LCE1AQ5T7P2 110 aa8.34□□□□□ -1.07
PKP3-211ENST00000534401 SPRR2EP22531 72 aa8.33□□□□□ -1.08
PKP3-211ENST00000534401 SPRR2BP35325 72 aa8.33□□□□□ -1.08
PKP3-211ENST00000534401 SPRR2AP35326 72 aa8.33□□□□□ -1.08
PKP3-211ENST00000534401 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
PKP3-211ENST00000534401 TMEM258P61165 79 aa8.24□□□□□ -1.09
PKP3-211ENST00000534401 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
PKP3-211ENST00000534401 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
PKP3-211ENST00000534401 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
PKP3-211ENST00000534401 KRTAP2-2Q9BYT5 123 aa8.16□□□□□ -1.1
PKP3-211ENST00000534401 KRTAP2-1Q9BYU5 128 aa8.16□□□□□ -1.1
PKP3-211ENST00000534401 A8MU10 97 aa8.14□□□□□ -1.11
PKP3-211ENST00000534401 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
PKP3-211ENST00000534401 KRTAP19-7Q3SYF9 63 aa8.06□□□□□ -1.12
PKP3-211ENST00000534401 SPRR2DP22532 72 aa8.05□□□□□ -1.12
PKP3-211ENST00000534401 RPS28P62857 69 aaKnown RBP8.01□□□□□ -1.13
PKP3-211ENST00000534401 MT1EP04732 61 aa7.95□□□□□ -1.14
PKP3-211ENST00000534401 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
PKP3-211ENST00000534401 UQCR11O14957 56 aa7.91□□□□□ -1.14
PKP3-211ENST00000534401 LCE5AQ5TCM9 118 aa7.88□□□□□ -1.15
PKP3-211ENST00000534401 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
PKP3-211ENST00000534401 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
PKP3-211ENST00000534401 KRTAP19-3Q7Z4W3 81 aa7.84□□□□□ -1.15
PKP3-211ENST00000534401 TNP1P09430 55 aa7.82□□□□□ -1.16
PKP3-211ENST00000534401 Q1T7F1 81 aa7.77□□□□□ -1.17
PKP3-211ENST00000534401 V9GYY9 64 aa7.76□□□□□ -1.17
PKP3-211ENST00000534401 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
PKP3-211ENST00000534401 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
PKP3-211ENST00000534401 GPR98Q8WXG9 6306 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms