RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 A6NED7 52 aa3.23□□□□□ -1.89
CHKA-208ENST00000533910 SPINK1P00995 79 aa3.23□□□□□ -1.89
CHKA-208ENST00000533910 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
CHKA-208ENST00000533910 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
CHKA-208ENST00000533910 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
CHKA-208ENST00000533910 NDUFB1O75438 58 aa3.22□□□□□ -1.89
CHKA-208ENST00000533910 ADM2Q7Z4H4 148 aa3.22□□□□□ -1.89
CHKA-208ENST00000533910 CYP4F30PQ9H0H9 118 aa3.21□□□□□ -1.9
CHKA-208ENST00000533910 ROMO1P60602 79 aa3.2□□□□□ -1.9
CHKA-208ENST00000533910 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
CHKA-208ENST00000533910 WFDC13Q8IUB5 93 aa3.2□□□□□ -1.9
CHKA-208ENST00000533910 LRP1Q07954 4544 aaKnown RBP3.2□□□□□ -1.9
CHKA-208ENST00000533910 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
CHKA-208ENST00000533910 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
CHKA-208ENST00000533910 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
CHKA-208ENST00000533910 H3BPC8 53 aa3.18□□□□□ -1.9
CHKA-208ENST00000533910 KLKP1Q107X0 134 aa3.18□□□□□ -1.9
CHKA-208ENST00000533910 TMEM254Q8TBM7 123 aa3.18□□□□□ -1.9
CHKA-208ENST00000533910 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
CHKA-208ENST00000533910 TNXBP22105 4242 aa3.16□□□□□ -1.9
CHKA-208ENST00000533910 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
CHKA-208ENST00000533910 H7BZZ5 65 aa3.16□□□□□ -1.9
CHKA-208ENST00000533910 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
CHKA-208ENST00000533910 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
CHKA-208ENST00000533910 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
CHKA-208ENST00000533910 MYCBP2O75592 4640 aa3.15□□□□□ -1.9
CHKA-208ENST00000533910 A8MUU9 505 aa3.15□□□□□ -1.91
CHKA-208ENST00000533910 C20orf197Q8N268 126 aa3.15□□□□□ -1.91
CHKA-208ENST00000533910 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CHKA-208ENST00000533910 ZCCHC13Q8WW36 166 aaKnown RBP3.14□□□□□ -1.91
CHKA-208ENST00000533910 TP53AIP1Q9HCN2 124 aa3.14□□□□□ -1.91
CHKA-208ENST00000533910 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
CHKA-208ENST00000533910 HERC2O95714 4834 aa3.14□□□□□ -1.91
CHKA-208ENST00000533910 TRAV22A0A0B4J277 110 aa3.13□□□□□ -1.91
CHKA-208ENST00000533910 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
CHKA-208ENST00000533910 SNURFQ9Y675 71 aa3.12□□□□□ -1.91
CHKA-208ENST00000533910 H0Y9P7 68 aa3.11□□□□□ -1.91
CHKA-208ENST00000533910 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
CHKA-208ENST00000533910 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
CHKA-208ENST00000533910 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
CHKA-208ENST00000533910 DMBT1Q9UGM3 2413 aaPredicted RBP3.1□□□□□ -1.91
CHKA-208ENST00000533910 Q5W150 140 aa3.09□□□□□ -1.91
CHKA-208ENST00000533910 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
CHKA-208ENST00000533910 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CHKA-208ENST00000533910 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
CHKA-208ENST00000533910 LOC101927531A0A1B0GV80 90 aa3.07□□□□□ -1.92
CHKA-208ENST00000533910 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CHKA-208ENST00000533910 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
CHKA-208ENST00000533910 C9orf92A6NGG3 77 aa3.06□□□□□ -1.92
CHKA-208ENST00000533910 A0A1B0GU33 70 aa3.05□□□□□ -1.92
CHKA-208ENST00000533910 MIR22HGQ0VDD5 57 aa3.05□□□□□ -1.92
CHKA-208ENST00000533910 Q5VV11 94 aa3.05□□□□□ -1.92
CHKA-208ENST00000533910 TPRXLQ17RH7 258 aa3.03□□□□□ -1.92
CHKA-208ENST00000533910 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
CHKA-208ENST00000533910 PCOTHQ58A44 107 aa3.01□□□□□ -1.93
CHKA-208ENST00000533910 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
CHKA-208ENST00000533910 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
CHKA-208ENST00000533910 P0C880 135 aa2.99□□□□□ -1.93
CHKA-208ENST00000533910 A8MU10 97 aa2.98□□□□□ -1.93
CHKA-208ENST00000533910 HRES1P13985 223 aa2.98□□□□□ -1.93
CHKA-208ENST00000533910 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
CHKA-208ENST00000533910 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
CHKA-208ENST00000533910 SPINK7P58062 85 aa2.96□□□□□ -1.94
CHKA-208ENST00000533910 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
CHKA-208ENST00000533910 LRP2P98164 4655 aa2.96□□□□□ -1.94
CHKA-208ENST00000533910 LPAP08519 4548 aa2.94□□□□□ -1.94
CHKA-208ENST00000533910 COA5Q86WW8 74 aa2.93□□□□□ -1.94
CHKA-208ENST00000533910 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CHKA-208ENST00000533910 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
CHKA-208ENST00000533910 ACYP2P14621 99 aa2.91□□□□□ -1.94
CHKA-208ENST00000533910 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
CHKA-208ENST00000533910 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
CHKA-208ENST00000533910 HERC1Q15751 4861 aa2.9□□□□□ -1.94
CHKA-208ENST00000533910 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
CHKA-208ENST00000533910 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
CHKA-208ENST00000533910 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
CHKA-208ENST00000533910 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
CHKA-208ENST00000533910 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
CHKA-208ENST00000533910 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
CHKA-208ENST00000533910 PRR15LQ9BU68 103 aa2.84□□□□□ -1.95
CHKA-208ENST00000533910 R4GN34 69 aa2.84□□□□□ -1.95
CHKA-208ENST00000533910 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CHKA-208ENST00000533910 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
CHKA-208ENST00000533910 H1FX-AS1Q4G0G2 97 aa2.82□□□□□ -1.96
CHKA-208ENST00000533910 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
CHKA-208ENST00000533910 S4R3F8 94 aa2.8□□□□□ -1.96
CHKA-208ENST00000533910 UQCR11O14957 56 aa2.79□□□□□ -1.96
CHKA-208ENST00000533910 A0A1B0GU69 56 aa2.75□□□□□ -1.97
CHKA-208ENST00000533910 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
CHKA-208ENST00000533910 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
CHKA-208ENST00000533910 MUC2Q02817 5179 aa2.73□□□□□ -1.97
CHKA-208ENST00000533910 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
CHKA-208ENST00000533910 H0YAA0 97 aa2.71□□□□□ -1.98
CHKA-208ENST00000533910 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
CHKA-208ENST00000533910 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
CHKA-208ENST00000533910 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
CHKA-208ENST00000533910 INE1O15225 51 aa2.65□□□□□ -1.99
CHKA-208ENST00000533910 MT1HP80294 61 aa2.65□□□□□ -1.99
CHKA-208ENST00000533910 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
CHKA-208ENST00000533910 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms