RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 TYMSOSQ8TAI1 123 aa2.35□□□□□ -2.03
CTSC-208ENST00000533897 LOC100996750A0A140TA64 210 aa2.34□□□□□ -2.03
CTSC-208ENST00000533897 UQCR11O14957 56 aa2.34□□□□□ -2.03
CTSC-208ENST00000533897 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
CTSC-208ENST00000533897 DMBT1Q9UGM3 2413 aaPredicted RBP2.34□□□□□ -2.04
CTSC-208ENST00000533897 RYR3Q15413 4870 aa2.33□□□□□ -2.04
CTSC-208ENST00000533897 LCE2BO14633 110 aa2.33□□□□□ -2.04
CTSC-208ENST00000533897 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
CTSC-208ENST00000533897 RYR1P21817 5038 aa2.32□□□□□ -2.04
CTSC-208ENST00000533897 Q8N1X5 172 aa2.31□□□□□ -2.04
CTSC-208ENST00000533897 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
CTSC-208ENST00000533897 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
CTSC-208ENST00000533897 KRTAP21-3Q3LHN1 58 aa2.3□□□□□ -2.04
CTSC-208ENST00000533897 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
CTSC-208ENST00000533897 CSAG1Q6PB30 78 aa2.28□□□□□ -2.04
CTSC-208ENST00000533897 KRTAP10-8P60410 259 aa2.28□□□□□ -2.04
CTSC-208ENST00000533897 MUC17Q685J3 4493 aa2.28□□□□□ -2.04
CTSC-208ENST00000533897 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
CTSC-208ENST00000533897 COX6B2Q6YFQ2 88 aa2.27□□□□□ -2.05
CTSC-208ENST00000533897 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
CTSC-208ENST00000533897 C9orf92A6NGG3 77 aa2.26□□□□□ -2.05
CTSC-208ENST00000533897 A0A1B0GU33 70 aa2.25□□□□□ -2.05
CTSC-208ENST00000533897 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
CTSC-208ENST00000533897 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
CTSC-208ENST00000533897 LRP2P98164 4655 aa2.24□□□□□ -2.05
CTSC-208ENST00000533897 SMR3BP02814 79 aaPredicted RBP2.23□□□□□ -2.05
CTSC-208ENST00000533897 CAMK2N1Q7Z7J9 78 aa2.23□□□□□ -2.05
CTSC-208ENST00000533897 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
CTSC-208ENST00000533897 XP32Q5T750 250 aa2.22□□□□□ -2.05
CTSC-208ENST00000533897 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
CTSC-208ENST00000533897 ROMO1P60602 79 aa2.21□□□□□ -2.06
CTSC-208ENST00000533897 EPPK1P58107 5090 aaKnown RBP2.21□□□□□ -2.06
CTSC-208ENST00000533897 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
CTSC-208ENST00000533897 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
CTSC-208ENST00000533897 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
CTSC-208ENST00000533897 P0C880 135 aa2.18□□□□□ -2.06
CTSC-208ENST00000533897 KRTAP19-2Q3LHN2 52 aa2.17□□□□□ -2.06
CTSC-208ENST00000533897 KRTAP12-2P59991 146 aa2.17□□□□□ -2.06
CTSC-208ENST00000533897 LCE2CQ5TA81 110 aa2.16□□□□□ -2.06
CTSC-208ENST00000533897 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CTSC-208ENST00000533897 CRIPTQ9P021 101 aa2.15□□□□□ -2.06
CTSC-208ENST00000533897 S4R3F8 94 aa2.15□□□□□ -2.07
CTSC-208ENST00000533897 Q5VSD8 79 aa2.14□□□□□ -2.07
CTSC-208ENST00000533897 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
CTSC-208ENST00000533897 LCE2AQ5TA79 106 aaPredicted RBP2.12□□□□□ -2.07
CTSC-208ENST00000533897 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
CTSC-208ENST00000533897 HERC1Q15751 4861 aa2.09□□□□□ -2.07
CTSC-208ENST00000533897 KRTAP4-1Q9BYQ7 146 aa2.09□□□□□ -2.07
CTSC-208ENST00000533897 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.08
CTSC-208ENST00000533897 M0QZ58 72 aa2.08□□□□□ -2.08
CTSC-208ENST00000533897 KRTAP23-1A1A580 65 aa2.08□□□□□ -2.08
CTSC-208ENST00000533897 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
CTSC-208ENST00000533897 LORP23490 312 aaPredicted RBP2.07□□□□□ -2.08
CTSC-208ENST00000533897 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
CTSC-208ENST00000533897 A0A0D9SG42 100 aa2.06□□□□□ -2.08
CTSC-208ENST00000533897 KRTAP4-5Q9BYR2 181 aa2.06□□□□□ -2.08
CTSC-208ENST00000533897 HERC2O95714 4834 aa2.05□□□□□ -2.08
CTSC-208ENST00000533897 MUC2Q02817 5179 aa2.03□□□□□ -2.09
CTSC-208ENST00000533897 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CTSC-208ENST00000533897 R4GN34 69 aa2□□□□□ -2.09
CTSC-208ENST00000533897 KRTAP4-8Q9BYQ9 185 aa1.99□□□□□ -2.09
CTSC-208ENST00000533897 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
CTSC-208ENST00000533897 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.93□□□□□ -2.1
CTSC-208ENST00000533897 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
CTSC-208ENST00000533897 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
CTSC-208ENST00000533897 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
CTSC-208ENST00000533897 KRTAP19-1Q8IUB9 90 aa1.91□□□□□ -2.1
CTSC-208ENST00000533897 PP632Q6XCG6 107 aa1.9□□□□□ -2.1
CTSC-208ENST00000533897 KRTAP9-2Q9BYQ4 174 aa1.9□□□□□ -2.11
CTSC-208ENST00000533897 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
CTSC-208ENST00000533897 KRTAP9-6A0A140TA67 174 aa1.86□□□□□ -2.11
CTSC-208ENST00000533897 KRTAP4-8A0A0G2JLE6 195 aa1.85□□□□□ -2.11
CTSC-208ENST00000533897 KRTAP9-8Q9BYQ0 159 aa1.85□□□□□ -2.11
CTSC-208ENST00000533897 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.11
CTSC-208ENST00000533897 MT1HP80294 61 aa1.84□□□□□ -2.11
CTSC-208ENST00000533897 KRTAP4-7Q9BYR0 210 aa1.84□□□□□ -2.11
CTSC-208ENST00000533897 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP9-9Q9BYP9 154 aa1.83□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP9-4Q9BYQ2 154 aa1.83□□□□□ -2.12
CTSC-208ENST00000533897 MT1FP04733 61 aa1.82□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
CTSC-208ENST00000533897 MT2AP02795 61 aa1.82□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP10-5P60370 271 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 MT1BP07438 61 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 TNP1P09430 55 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 MT1XP80297 61 aa1.8□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
CTSC-208ENST00000533897 LCE3AQ5TA76 89 aa1.78□□□□□ -2.12
CTSC-208ENST00000533897 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
CTSC-208ENST00000533897 KRTAP10-12P60413 245 aa1.75□□□□□ -2.13
CTSC-208ENST00000533897 KRTAP4-9Q9BYQ8 210 aa1.73□□□□□ -2.13
CTSC-208ENST00000533897 INE1O15225 51 aa1.73□□□□□ -2.13
CTSC-208ENST00000533897 KRTAP10-7P60409 375 aaPredicted RBP1.72□□□□□ -2.13
CTSC-208ENST00000533897 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
CTSC-208ENST00000533897 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
CTSC-208ENST00000533897 M0R2T5 61 aa1.66□□□□□ -2.14
CTSC-208ENST00000533897 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
CTSC-208ENST00000533897 OBSCNQ5VST9 7968 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms