RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 C8orf17Q9NRJ1 99 aa5.75□□□□□ -1.49
CAPRIN1-215ENST00000533657 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
CAPRIN1-215ENST00000533657 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
CAPRIN1-215ENST00000533657 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
CAPRIN1-215ENST00000533657 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
CAPRIN1-215ENST00000533657 P0C880 135 aa5.69□□□□□ -1.5
CAPRIN1-215ENST00000533657 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
CAPRIN1-215ENST00000533657 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
CAPRIN1-215ENST00000533657 A8MUU9 505 aa5.65□□□□□ -1.51
CAPRIN1-215ENST00000533657 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.51
CAPRIN1-215ENST00000533657 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
CAPRIN1-215ENST00000533657 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
CAPRIN1-215ENST00000533657 XP32Q5T750 250 aa5.6□□□□□ -1.51
CAPRIN1-215ENST00000533657 Q5W150 140 aa5.6□□□□□ -1.51
CAPRIN1-215ENST00000533657 MUC17Q685J3 4493 aa5.59□□□□□ -1.52
CAPRIN1-215ENST00000533657 HERC1Q15751 4861 aa5.58□□□□□ -1.52
CAPRIN1-215ENST00000533657 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
CAPRIN1-215ENST00000533657 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
CAPRIN1-215ENST00000533657 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
CAPRIN1-215ENST00000533657 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
CAPRIN1-215ENST00000533657 NDUFAF8A1L188 74 aa5.52□□□□□ -1.53
CAPRIN1-215ENST00000533657 LPAP08519 4548 aa5.49□□□□□ -1.53
CAPRIN1-215ENST00000533657 K7ERS5 55 aa5.48□□□□□ -1.53
CAPRIN1-215ENST00000533657 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
CAPRIN1-215ENST00000533657 IGKV2-30P06310 120 aa5.47□□□□□ -1.53
CAPRIN1-215ENST00000533657 H0YAA0 97 aa5.47□□□□□ -1.53
CAPRIN1-215ENST00000533657 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
CAPRIN1-215ENST00000533657 LRP2P98164 4655 aa5.42□□□□□ -1.54
CAPRIN1-215ENST00000533657 A0A1B0GU33 70 aa5.4□□□□□ -1.55
CAPRIN1-215ENST00000533657 IGKV2D-30A0A075B6S6 120 aa5.39□□□□□ -1.55
CAPRIN1-215ENST00000533657 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
CAPRIN1-215ENST00000533657 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
CAPRIN1-215ENST00000533657 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
CAPRIN1-215ENST00000533657 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
CAPRIN1-215ENST00000533657 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
CAPRIN1-215ENST00000533657 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
CAPRIN1-215ENST00000533657 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.57
CAPRIN1-215ENST00000533657 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
CAPRIN1-215ENST00000533657 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
CAPRIN1-215ENST00000533657 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
CAPRIN1-215ENST00000533657 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
CAPRIN1-215ENST00000533657 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
CAPRIN1-215ENST00000533657 MUC2Q02817 5179 aa5.08□□□□□ -1.6
CAPRIN1-215ENST00000533657 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
CAPRIN1-215ENST00000533657 A0A0D9SG42 100 aa5.04□□□□□ -1.6
CAPRIN1-215ENST00000533657 MT1HP80294 61 aa5.04□□□□□ -1.6
CAPRIN1-215ENST00000533657 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
CAPRIN1-215ENST00000533657 S4R3F8 94 aa5□□□□□ -1.61
CAPRIN1-215ENST00000533657 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
CAPRIN1-215ENST00000533657 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
CAPRIN1-215ENST00000533657 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
CAPRIN1-215ENST00000533657 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
CAPRIN1-215ENST00000533657 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
CAPRIN1-215ENST00000533657 M0R2T5 61 aa4.87□□□□□ -1.63
CAPRIN1-215ENST00000533657 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
CAPRIN1-215ENST00000533657 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
CAPRIN1-215ENST00000533657 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
CAPRIN1-215ENST00000533657 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
CAPRIN1-215ENST00000533657 MT2AP02795 61 aa4.79□□□□□ -1.64
CAPRIN1-215ENST00000533657 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CAPRIN1-215ENST00000533657 MT1FP04733 61 aa4.74□□□□□ -1.65
CAPRIN1-215ENST00000533657 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
CAPRIN1-215ENST00000533657 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
CAPRIN1-215ENST00000533657 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
CAPRIN1-215ENST00000533657 M0QZ58 72 aa4.66□□□□□ -1.66
CAPRIN1-215ENST00000533657 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.66
CAPRIN1-215ENST00000533657 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
CAPRIN1-215ENST00000533657 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
CAPRIN1-215ENST00000533657 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
CAPRIN1-215ENST00000533657 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
CAPRIN1-215ENST00000533657 R4GN34 69 aa4.56□□□□□ -1.68
CAPRIN1-215ENST00000533657 LCE2BO14633 110 aa4.53□□□□□ -1.68
CAPRIN1-215ENST00000533657 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
CAPRIN1-215ENST00000533657 MT1BP07438 61 aa4.48□□□□□ -1.69
CAPRIN1-215ENST00000533657 INE1O15225 51 aa4.47□□□□□ -1.69
CAPRIN1-215ENST00000533657 USH2AO75445 5202 aa4.42□□□□□ -1.7
CAPRIN1-215ENST00000533657 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
CAPRIN1-215ENST00000533657 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
CAPRIN1-215ENST00000533657 SSPOA2VEC9 5147 aa4.34□□□□□ -1.72
CAPRIN1-215ENST00000533657 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
CAPRIN1-215ENST00000533657 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
CAPRIN1-215ENST00000533657 MT1XP80297 61 aa4.28□□□□□ -1.72
CAPRIN1-215ENST00000533657 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
CAPRIN1-215ENST00000533657 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
CAPRIN1-215ENST00000533657 TNP1P09430 55 aa4.19□□□□□ -1.74
CAPRIN1-215ENST00000533657 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
CAPRIN1-215ENST00000533657 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
CAPRIN1-215ENST00000533657 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
CAPRIN1-215ENST00000533657 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
CAPRIN1-215ENST00000533657 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
CAPRIN1-215ENST00000533657 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CAPRIN1-215ENST00000533657 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
CAPRIN1-215ENST00000533657 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
CAPRIN1-215ENST00000533657 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
CAPRIN1-215ENST00000533657 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
CAPRIN1-215ENST00000533657 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
CAPRIN1-215ENST00000533657 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.78
CAPRIN1-215ENST00000533657 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
CAPRIN1-215ENST00000533657 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
CAPRIN1-215ENST00000533657 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms