RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
UBASH3B-208ENST00000533451 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
UBASH3B-208ENST00000533451 A0A087WVE0 104 aa5.54□□□□□ -1.52
UBASH3B-208ENST00000533451 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
UBASH3B-208ENST00000533451 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
UBASH3B-208ENST00000533451 MT1FP04733 61 aa5.52□□□□□ -1.53
UBASH3B-208ENST00000533451 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
UBASH3B-208ENST00000533451 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
UBASH3B-208ENST00000533451 LOC101927531A0A1B0GV80 90 aa5.49□□□□□ -1.53
UBASH3B-208ENST00000533451 H0Y9P7 68 aa5.49□□□□□ -1.53
UBASH3B-208ENST00000533451 UQCRQO14949 82 aa5.49□□□□□ -1.53
UBASH3B-208ENST00000533451 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
UBASH3B-208ENST00000533451 S4R3F8 94 aa5.48□□□□□ -1.53
UBASH3B-208ENST00000533451 ATOX1O00244 68 aa5.47□□□□□ -1.53
UBASH3B-208ENST00000533451 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
UBASH3B-208ENST00000533451 SCGB1A1P11684 91 aa5.42□□□□□ -1.54
UBASH3B-208ENST00000533451 MP68P56378 58 aa5.42□□□□□ -1.54
UBASH3B-208ENST00000533451 LINC00208Q96KT6 92 aa5.41□□□□□ -1.54
UBASH3B-208ENST00000533451 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.54
UBASH3B-208ENST00000533451 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.54
UBASH3B-208ENST00000533451 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
UBASH3B-208ENST00000533451 LCA10Q71F78 164 aa5.4□□□□□ -1.54
UBASH3B-208ENST00000533451 K7ERU9 68 aa5.38□□□□□ -1.55
UBASH3B-208ENST00000533451 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
UBASH3B-208ENST00000533451 USH2AO75445 5202 aa5.33□□□□□ -1.56
UBASH3B-208ENST00000533451 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
UBASH3B-208ENST00000533451 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
UBASH3B-208ENST00000533451 A8MUN3 132 aa5.29□□□□□ -1.56
UBASH3B-208ENST00000533451 H3BPC8 53 aa5.29□□□□□ -1.56
UBASH3B-208ENST00000533451 NDUFC1O43677 76 aa5.29□□□□□ -1.56
UBASH3B-208ENST00000533451 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
UBASH3B-208ENST00000533451 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
UBASH3B-208ENST00000533451 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
UBASH3B-208ENST00000533451 TRAV7A0A075B6U4 112 aa5.21□□□□□ -1.58
UBASH3B-208ENST00000533451 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
UBASH3B-208ENST00000533451 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
UBASH3B-208ENST00000533451 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
UBASH3B-208ENST00000533451 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
UBASH3B-208ENST00000533451 Q5VV11 94 aa5.15□□□□□ -1.59
UBASH3B-208ENST00000533451 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
UBASH3B-208ENST00000533451 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
UBASH3B-208ENST00000533451 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
UBASH3B-208ENST00000533451 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
UBASH3B-208ENST00000533451 H0YAA0 97 aa5.12□□□□□ -1.59
UBASH3B-208ENST00000533451 ACYP2P14621 99 aa5.1□□□□□ -1.59
UBASH3B-208ENST00000533451 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
UBASH3B-208ENST00000533451 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
UBASH3B-208ENST00000533451 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
UBASH3B-208ENST00000533451 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
UBASH3B-208ENST00000533451 MT1BP07438 61 aa5.07□□□□□ -1.6
UBASH3B-208ENST00000533451 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
UBASH3B-208ENST00000533451 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
UBASH3B-208ENST00000533451 A6NN06 94 aa5.05□□□□□ -1.6
UBASH3B-208ENST00000533451 R4GN34 69 aa5.03□□□□□ -1.6
UBASH3B-208ENST00000533451 P0C880 135 aa5.02□□□□□ -1.61
UBASH3B-208ENST00000533451 M0QZ58 72 aa5.01□□□□□ -1.61
UBASH3B-208ENST00000533451 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
UBASH3B-208ENST00000533451 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
UBASH3B-208ENST00000533451 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.61
UBASH3B-208ENST00000533451 COX7CP15954 63 aa4.95□□□□□ -1.62
UBASH3B-208ENST00000533451 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
UBASH3B-208ENST00000533451 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
UBASH3B-208ENST00000533451 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
UBASH3B-208ENST00000533451 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
UBASH3B-208ENST00000533451 COA5Q86WW8 74 aa4.89□□□□□ -1.63
UBASH3B-208ENST00000533451 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
UBASH3B-208ENST00000533451 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
UBASH3B-208ENST00000533451 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
UBASH3B-208ENST00000533451 H7BZZ5 65 aa4.83□□□□□ -1.64
UBASH3B-208ENST00000533451 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
UBASH3B-208ENST00000533451 SEC61GP60059 68 aa4.81□□□□□ -1.64
UBASH3B-208ENST00000533451 MT1XP80297 61 aa4.8□□□□□ -1.64
UBASH3B-208ENST00000533451 SERP1Q9Y6X1 66 aa4.79□□□□□ -1.64
UBASH3B-208ENST00000533451 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
UBASH3B-208ENST00000533451 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
UBASH3B-208ENST00000533451 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
UBASH3B-208ENST00000533451 A0A0D9SG42 100 aa4.7□□□□□ -1.66
UBASH3B-208ENST00000533451 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
UBASH3B-208ENST00000533451 A0A1B0GU69 56 aa4.67□□□□□ -1.66
UBASH3B-208ENST00000533451 A0A1B0GU33 70 aa4.66□□□□□ -1.66
UBASH3B-208ENST00000533451 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
UBASH3B-208ENST00000533451 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
UBASH3B-208ENST00000533451 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
UBASH3B-208ENST00000533451 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
UBASH3B-208ENST00000533451 NEBP20929 6669 aa4.63□□□□□ -1.67
UBASH3B-208ENST00000533451 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
UBASH3B-208ENST00000533451 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
UBASH3B-208ENST00000533451 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
UBASH3B-208ENST00000533451 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
UBASH3B-208ENST00000533451 MT3P25713 68 aa4.59□□□□□ -1.67
UBASH3B-208ENST00000533451 TMEM258P61165 79 aa4.58□□□□□ -1.68
UBASH3B-208ENST00000533451 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
UBASH3B-208ENST00000533451 KMT2DO14686 5537 aa4.58□□□□□ -1.68
UBASH3B-208ENST00000533451 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
UBASH3B-208ENST00000533451 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
UBASH3B-208ENST00000533451 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
UBASH3B-208ENST00000533451 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
UBASH3B-208ENST00000533451 SPRR2EP22531 72 aa4.53□□□□□ -1.68
UBASH3B-208ENST00000533451 SPRR2BP35325 72 aa4.53□□□□□ -1.68
UBASH3B-208ENST00000533451 SPRR2AP35326 72 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms