RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 NBPF19A0A087WUL8 3843 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 TEX15Q9BXT5 2789 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 APELAP0DMC3 54 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 DEFB1P60022 68 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 PRO0255Q9UI72 69 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 RYR2Q92736 4967 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 ASPMQ8IZT6 3477 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 CSMD3Q7Z407 3707 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 RYR1P21817 5038 aa0.67□□□□□ -2.3
LMO7-222ENST00000532785 DNAH10Q8IVF4 4471 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 CMYA5Q8N3K9 4069 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 LRBAP50851 2863 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 CFAP54Q96N23 3096 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 DNAH7Q8WXX0 4024 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 DNAH17Q9UFH2 4485 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 MTORP42345 2549 aa0.66□□□□□ -2.3
LMO7-222ENST00000532785 ANK3Q12955 4377 aaKnown RBP0.65□□□□□ -2.3
LMO7-222ENST00000532785 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
LMO7-222ENST00000532785 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.31
LMO7-222ENST00000532785 SPINK1P00995 79 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 NIPBLQ6KC79 2804 aaeCLIP0.65□□□□□ -2.31
LMO7-222ENST00000532785 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 HSPG2P98160 4391 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 TLN2Q9Y4G6 2542 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 ITPR2Q14571 2701 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 PKD1P98161 4303 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 DNAH1Q9P2D7 4330 aa0.65□□□□□ -2.31
LMO7-222ENST00000532785 HTTP42858 3142 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 LYSTQ99698 3801 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 PKHD1L1Q86WI1 4243 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 CEP295Q9C0D2 2601 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
LMO7-222ENST00000532785 NOP10Q9NPE3 64 aaKnown RBP0.64□□□□□ -2.31
LMO7-222ENST00000532785 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
LMO7-222ENST00000532785 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 ACANP16112 2415 aa0.64□□□□□ -2.31
LMO7-222ENST00000532785 TRIOO75962 3097 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 KMT2CQ8NEZ4 4911 aaKnown RBP0.63□□□□□ -2.31
LMO7-222ENST00000532785 FRYLO94915 3013 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 C5orf42Q9H799 3197 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 PRUNE2Q8WUY3 3088 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 A0A0D9SG42 100 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 RHPN1-AS1Q9BWJ2 59 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 LAMA3Q16787 3333 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 KMT2AQ03164 3969 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 DMDP11532 3685 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
LMO7-222ENST00000532785 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
LMO7-222ENST00000532785 DMXL2Q8TDJ6 3036 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 ATMQ13315 3056 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 NEBP20929 6669 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 H3BUX3 64 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 DNAH6Q9C0G6 4158 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 DCHS2Q6V1P9 2916 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 CENPEQ02224 2701 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 PLECQ15149 4684 aaKnown RBP0.62□□□□□ -2.31
LMO7-222ENST00000532785 FRYQ5TBA9 3013 aa0.62□□□□□ -2.31
LMO7-222ENST00000532785 CENPFP49454 3210 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 HERC1Q15751 4861 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 DNAH5Q8TE73 4624 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
LMO7-222ENST00000532785 DEFB110Q30KQ9 67 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 DYNC1H1Q14204 4646 aaKnown RBP0.61□□□□□ -2.31
LMO7-222ENST00000532785 ABCA13Q86UQ4 5058 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
LMO7-222ENST00000532785 TACC2O95359 2948 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 TRRAPQ9Y4A5 3859 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
LMO7-222ENST00000532785 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
LMO7-222ENST00000532785 DEFB108BQ8NET1 73 aa0.6□□□□□ -2.31
LMO7-222ENST00000532785 SMG1Q96Q15 3661 aaKnown RBP0.6□□□□□ -2.31
LMO7-222ENST00000532785 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.31
LMO7-222ENST00000532785 ZZEF1O43149 2961 aa0.59□□□□□ -2.31
LMO7-222ENST00000532785 HECTD4Q9Y4D8 3996 aa0.59□□□□□ -2.31
LMO7-222ENST00000532785 M0QZ58 72 aa0.59□□□□□ -2.31
LMO7-222ENST00000532785 HTN1P15515 57 aa0.59□□□□□ -2.31
LMO7-222ENST00000532785 PKHD1P08F94 4074 aa0.59□□□□□ -2.32
LMO7-222ENST00000532785 TNXBP22105 4242 aa0.59□□□□□ -2.32
LMO7-222ENST00000532785 FSIP2Q5CZC0 6907 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 TGP01266 2768 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 LAMA5O15230 3695 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 DNAH14Q0VDD8 3507 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 XIRP2A4UGR9 3374 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 LPAP08519 4548 aa0.58□□□□□ -2.32
LMO7-222ENST00000532785 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
LMO7-222ENST00000532785 SSPOA2VEC9 5147 aa0.57□□□□□ -2.32
LMO7-222ENST00000532785 LOC400499M0QZD8 3231 aa0.57□□□□□ -2.32
LMO7-222ENST00000532785 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
LMO7-222ENST00000532785 DMXL1Q9Y485 3027 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 HERC2O95714 4834 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 VPS13AQ96RL7 3174 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 SPENQ96T58 3664 aaKnown RBP0.56□□□□□ -2.32
LMO7-222ENST00000532785 MUC17Q685J3 4493 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms